Geochorda subterranea: VLY81_13300
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Entry
VLY81_13300 CDS
T10455
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gsc Geochorda subterranea
Pathway
gsc01100
Metabolic pathways
gsc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gsc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
VLY81_13300 (pdxS)
Enzymes [BR:
gsc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
VLY81_13300 (pdxS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
OMPdecase
His_biosynth
IGPS
NanE
NMO
Trp_syntA
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
WRP14378
UniProt:
A0ABZ1BP52
LinkDB
All DBs
Position
complement(2768258..2769145)
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AA seq
295 aa
AA seq
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MERRTGTWTVKDGLARMLKGGVIMDVTTPEQARIAEEAGAVAVMALERVPADIRAAGGVA
RMADPDVVEAIKRAVTIPVMAKVRIGHFVEAQILEALEVDFIDESEVLTPADEEHHIDKH
AFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGDVVEAVRHLRRVNRQIRELTTLGP
EELMARAKELGAPYELVRQVAQEGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIF
KSADPAARARAIVQAVAHYDDPRVLAEASRGLGEAMPGRAAAQLQAAERLQERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcgcaccggtacctggacggtcaaggacgggctcgcgcggatgctgaagggg
ggcgtcatcatggacgtcaccacccccgagcaggcgcgcatcgccgaggaggccggtgcc
gtcgcggtcatggccctcgagcgggtaccggccgacatccgggccgcggggggcgtcgcc
cggatggccgaccccgacgtcgtcgaggccatcaagcgggccgtcaccatccccgtcatg
gccaaggtccgcatcggccacttcgtcgaggcgcagatcctggaggccctggaggtggac
ttcatcgacgagagcgaggtgctgaccccggccgacgaggagcaccacatcgacaagcac
gccttcaaggtgcccttcgtctgtggcgcgcgcgacctgggcgaggcccttcggcgcatc
gccgagggcgccgccatgatccgcaccaagggcgaggccggcacgggtgacgtcgtggag
gccgtccgccacctgcgccgggtcaaccggcagatccgtgagctgaccaccctgggtccc
gaggagctgatggccagggccaaggagctgggggccccctacgagctggtgcgccaggta
gcgcaggaggggaggctcccggtggtcaacttcgcggctggcggcgtggccacgccggcg
gatgccgcgctcatgatgcagctcggtgccgacggcgtcttcgtggggtcgggcatcttc
aagtcggccgacccggccgcccgagcccgcgccatcgtgcaggcggtggctcactacgac
gacccgcgcgtcctggccgaggcatcgagaggcctgggcgaggcgatgcccgggcgggcc
gcggcccagctgcaggcggcggagcggcttcaggagcgagggtggtga
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