Gulosibacter sediminis: M3M28_00710
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Entry
M3M28_00710 CDS
T08132
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M3M28_00710 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsd03019
]
M3M28_00710 (recQ)
03400 DNA repair and recombination proteins [BR:
gsd03400
]
M3M28_00710 (recQ)
Enzymes [BR:
gsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M28_00710 (recQ)
Messenger RNA biogenesis [BR:
gsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M3M28_00710 (recQ)
DNA repair and recombination proteins [BR:
gsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M3M28_00710 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UQN15023
LinkDB
All DBs
Position
complement(151742..153550)
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AA seq
602 aa
AA seq
DB search
MATAQQVLEQVWGYPEFRGQQAEIIDAVVQGKDALVLMPTGGGKSLCYQVPALVREGTGI
VISPLIALMQDQVDALGQLGVRAAYLNSTLDSDERRLVEQQYIAGELDLLYLAPERLQAT
IPLLQRGNISLFAIDEAHCVSQWGHDFRPDYLQLSVLHEQWPDVPRVALTATATLATRDE
IIERLGLDGAAKFVSSFDRPNIQYRIVPKDRARDSLHKFIKAEHPGDAGIVYCLSRKSVE
QTAEYLSDRGIPALAYHAGMPAATRAANQARFLREEGLVMCATIAFGMGIDKPDVRFVGH
LDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRRMIDQGEGDDFYKRQQSLHLD
AMLALSETAGCRRQMLLDYFGERSEPCGNCDNCINPPATWDGTVAAQKLLSTIVRIDRSQ
RRAFGAGQLIDILLGRDTDRIAQNRHNELSTYGIGTELDESGWRSVVRQLLAMNVIQAHG
DYGVLRMTERGASVLGGGEQVQLRTDVREQRVRTSRSSRPKPELDSLQPDQLARFERLRE
WRRDTAREQSVPAYVVFNDATLRELAVERPDTITALAGISGVGRSKLEQYGEEVLEVIAS
RE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcacagcaggtcctcgaacaggtatggggttacccagagtttcgcgggcag
caggccgagatcatcgacgccgtcgtgcagggcaaggacgccctcgtgctcatgcccact
ggcggcggcaagtcgctctgttaccaggtgcccgcgctcgtgcgcgagggcacgggcatc
gtcatctcgccgctcatcgcgctcatgcaagaccaggtggatgcgctgggccagctcggc
gtacgggccgcctacctgaattcgacgctcgacagcgacgagcgtcggctcgtcgagcag
cagtacatcgctggcgagctcgatctgctctacctcgcgcccgagcggctgcaggcgacc
atcccgctattgcagcgcggcaacatctcgctgttcgcgatcgacgaggcgcactgtgtg
agccagtggggccacgacttccggcccgactacctgcagctcagcgtgctgcacgagcag
tggcccgatgtgccccgggtcgcgcttaccgcgaccgcgacgctcgcgacgcgcgacgag
attatcgagcggctcggcctcgacggggccgcgaagttcgtgtcgagcttcgaccgcccg
aacattcagtaccgcatcgtgccgaaagaccgcgcgcgtgattcgctgcacaagttcatc
aaggccgagcacccgggcgacgcgggcatcgtctactgcctctcgcgcaagtcggtcgag
cagacggctgagtacctgagcgaccgcggcatccctgccctcgcctaccacgcgggcatg
ccggcggcgacgcgcgcggcgaaccaggcgcggttcctgcgcgaggaggggctcgtgatg
tgcgcgacgatcgcgttcggcatgggtatcgacaagcccgacgtgcgcttcgtcgggcac
ctcgacctgccgaagtcggtcgaaggctactaccaagagacggggcgcgccggccgcgac
gggctgccgtcgaccgcgtggctcgcgtatggcctgcaggacgtcgtgcagcagcgccgc
atgatcgatcagggcgagggcgacgacttctataagcggcagcagtcgctgcacctcgat
gcgatgctcgcactgagcgagaccgccggctgccggcgccagatgctgctcgactacttc
ggcgaacggtcggagccgtgcggcaactgcgacaactgcatcaacccgcccgcgacttgg
gatggcaccgtcgccgcgcagaagctgctctcgacgatcgtccgcatcgaccgctcgcag
cggcgcgcgttcggcgctggccaactcatcgacatcctgctcgggcgcgacaccgaccgc
atcgcgcagaaccgccacaacgagctgtcgacgtacggcatcggcaccgagctcgacgag
tcgggctggcgctcggtggtgcggcagctactcgccatgaacgtgattcaggcgcacggc
gactacggcgtgctgcgcatgaccgagcgcggggcgtcggtgctcggcgggggcgagcag
gtgcagctgcgaacggatgtgcgcgagcagcgcgtgcgcacctcccgttcgtcgcgcccc
aagcccgagctcgactcgctgcaacccgaccagctcgcccgcttcgagcgcctgcgcgag
tggcgccgcgacaccgcgcgcgagcagtcggtgcccgcgtacgtcgtcttcaacgacgcg
acgctgcgcgagctcgcggtcgaacgccccgacaccatcaccgccctcgccggcatctcg
ggcgttggccgttcaaagctcgagcagtacggcgaagaagtgctcgaagtgatcgcgtcg
cgcgagtag
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