Gulosibacter sediminis: M3M28_03140
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Entry
M3M28_03140 CDS
T08132
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M3M28_03140 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsd03019
]
M3M28_03140 (orn)
03009 Ribosome biogenesis [BR:
gsd03009
]
M3M28_03140 (orn)
Messenger RNA biogenesis [BR:
gsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M3M28_03140 (orn)
Ribosome biogenesis [BR:
gsd03009
]
Eukaryotic type
Pre-60S particles
RNases
M3M28_03140 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UQN15475
UniProt:
A0ABY4N0K4
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All DBs
Position
complement(708565..709203)
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AA seq
212 aa
AA seq
DB search
MSASSDKNGRMVWIDCEMTGLDIGVDELCEIAVFVTDSEINVLDAKGLDVVIKPSQAAMD
NMGEFVTNMHKTSGLAEEIPNGVTVEEAQQQVLDYVKRFVPGERTAPLAGNTIGTDRMFL
AKQMPELDTYLHYRNIDVSTLKELARRWYPRIYFQSPEKHGGHRAAADILESIRELRYYR
QAMIVSAPGPDTESLKQISKSIVDEFSPLLES
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctcgagtgacaaaaatggccgcatggtgtggatcgactgcgagatgacgggt
ctcgacattggcgtcgatgagctctgcgaaatcgcggtgttcgtcaccgactccgagatc
aacgtgctcgacgcgaagggcctcgacgtcgtaatcaagccgtcgcaggcggccatggac
aacatgggtgagttcgtcacgaacatgcacaagacgtcgggcctcgcggaagagatcccg
aatggcgtcaccgtcgaggaggcgcagcagcaagtgctcgactacgtcaagcggttcgtg
cctggcgagcgcaccgctcccctggccggcaacaccatcggtaccgaccgcatgttcctc
gcgaagcagatgcctgaactcgacacctacttgcactaccggaacatcgacgtgtcgacg
ctgaaggagctcgcgcgacggtggtacccgcgcatctacttccagtcgccagagaagcac
ggcggccaccgtgcggcggccgacatcctcgagtcgattcgcgagttgcgctactaccgc
caggccatgatcgtgtcggcgcccggccccgacaccgagtcgctcaagcagatttcgaaa
agcatcgtcgacgagttttcacccctgctcgaatcgtga
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