Gulosibacter sediminis: M3M28_03635
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Entry
M3M28_03635 CDS
T08132
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M3M28_03635
09124 Replication and repair
03420 Nucleotide excision repair
M3M28_03635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsd03021
]
M3M28_03635
03400 DNA repair and recombination proteins [BR:
gsd03400
]
M3M28_03635
Enzymes [BR:
gsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M28_03635
Transcription machinery [BR:
gsd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M3M28_03635
DNA repair and recombination proteins [BR:
gsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M3M28_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UQN15563
LinkDB
All DBs
Position
complement(807213..808856)
Genome browser
AA seq
547 aa
AA seq
DB search
MADGPLIVQSDRTVLLEVAHPDADAARHELAVFAELERAPEHIHTYRITRLGLWNARAAG
HDADEMLGTLNRYAKFPVPDAVAIDLRETVNRYGRLTVDRDEDGGLVLRSTDESVLRQVS
SNKKIAPMLHGELAPGVMRVDDWARGELKQQLVKLGWPAEDLAGYTPGTPHEIDLNEDGW
SLRDYQRDAVDHFFTGGSGVVVLPCGAGKTIVGAGAMAAADTNTLILVTNTVSARQWRSE
LLARTSLTEEEIGEYSGEVKEVKPVTIATYQILTAKRKGQYAHLSLLNALDWGLIVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGYISP
AECFEVRVDLPYEARMEYAGASDEDRYRIAASAEVKHDVARRLVHKHAGERILIIGQYLD
QLDAIAEELQAPKVTGQTPVAEREELFNAFRSGAEPILVVSKVANFSVDLPDASVAIQIS
GSYGSRQEEAQRLGRLLRPSSSGVTASFYTVVARDTVDQDFAQNRQRFLAEQGYSYSILD
ADEIPAS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggacctctcatcgttcaaagcgaccgcacggtgctgctcgaagtggcgcac
cccgacgcggatgcggcccgtcacgagctcgcggtgttcgccgagctcgagcgggcgccc
gagcacatccacacctaccgcatcacgcggctcggcctctggaatgcgcgggcggccggc
cacgacgccgacgagatgctcggcacgctgaatcgttacgcaaagtttccggtgcccgat
gccgtcgcgatcgacctgcgcgagaccgtgaaccgctacggccgcctcacggtcgaccgc
gatgaggacggcgggctcgtgctgcgcagcaccgacgagtcggtgctgcggcaggtctcg
tcgaacaagaagatcgcgccgatgctccatggtgagctcgcgcccggcgtcatgcgggtc
gacgactgggcgcgcggcgagctgaagcagcagctcgtgaagctcggctggccagccgaa
gacctcgcaggctacacgccgggcactccgcacgaaatcgacctcaacgaggacggctgg
agcctgcgcgactaccagcgcgacgccgtcgaccacttcttcaccggcggctcgggcgtc
gtcgtgctgccctgtggcgcgggcaagacgatcgtcggcgccggcgcgatggccgcggcc
gacacaaacaccctgatcctcgtgacgaacaccgtctcggcgcgccagtggcgcagcgag
ctgctcgcccgcacctcgctcaccgaggaagaaatcggcgagtactcgggcgaggtgaag
gaggtcaagccggtcacgatcgcgacctatcagatcctcaccgcgaagcggaagggccag
tacgcccacctgtcgctgctcaacgcgctcgactggggcctcatcgtctacgacgaggtg
cacctcctccccgcccccgtcttcaagctcacggccgagctgcaggcgcgccgacgcctc
ggcctcaccgcgacactcgtgcgcgaggacggccgcgagggtgacgtgttctcgctcatc
gggccgaagcgtttcgacgcgccctggaaagagatcgaggcgcagggctacatctcgccc
gccgagtgctttgaggtgcgcgtcgacctgccgtatgaggcccgcatggagtacgccggt
gcgagcgacgaagaccgctatcgcatcgccgcaagcgccgaggtgaagcacgacgtcgcg
cgccggctcgtgcacaagcacgcgggcgagcgcatcctcatcattggccagtacctcgac
cagctcgacgcgatcgccgaggagctccaggcgccgaaggtgaccggccagaccccggtt
gccgagcgcgaggaactattcaacgcgttccgctcgggcgccgagccgatcctcgtcgtg
tcgaaggtcgcgaacttctcggtcgacctgccggatgcctcggtcgcgattcagatctcg
gggtcgtacggctcgcggcaggaggaggcgcagcgcctcggccgcctgctgcgcccgtcg
tcatccggcgtcaccgcgtcgttctataccgtcgtggcgcgcgacactgttgaccaagac
ttcgcgcagaaccgacagcgcttcctcgccgagcaggggtactcctactccatcctcgac
gcggacgaaatccccgcaagctag
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