Gulosibacter sediminis: M3M28_05130
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Entry
M3M28_05130 CDS
T08132
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd03420
Nucleotide excision repair
gsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M3M28_05130
03430 Mismatch repair
M3M28_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsd03400
]
M3M28_05130
Enzymes [BR:
gsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M28_05130
DNA repair and recombination proteins [BR:
gsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M3M28_05130
MMR (mismatch excision repair)
Other MMR factors
M3M28_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
UQN15837
LinkDB
All DBs
Position
1129684..1131426
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AA seq
580 aa
AA seq
DB search
MADRSADSAGASLLADLNPAQREAALAVVGPVCILAGPGTGKTHTITRRIAYGVRTGVYA
PDRVLALTFTNRAAGQLRGRLGTLGASAVQARTFHSAALRQLSFFWPQVVGGSFPGIVSS
KSPIISEAADRAGVRLSPPLLRKVAEQLEWRKVSERTLDQFGEDLASGRHPNETGLPAEQ
LHDLAVQYERAKESRHQLDFEDVLLATAGMLESEPWITSQVRSQYRFFVVDEYQDISPLQ
HKLLRLWLGNRRELCVVGDPAQTIYSFAGANADYLTGFSSEFADARVIRVDGSYRSTPPI
IAAANELAKHISHAIQLDPLRAHTGKFPQPDVRSYESDEAEAAGVARSIRHDLEAGRAPG
DIAILVRTNAQVGVLERALEAVDVPFRLAGGMPFFRRPEVRAVLAGLHAAVVAGQDSGPL
FQTVSNVLRSRGWQQQRPVEPGPLREAWGAMDAIMRFADKAHAGTTLAEFSAELESRAAH
QFELPIDAVTISTMHAAKGLEWDHVYVVGLREGLLPTTAAANEPELVNEERRLFYVALTR
ARDQLHLSHALVQPPTRFLPELGNRIRIGTPPLHHPDADR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgatcggctgattcagccggcgccagcctgctcgccgatctcaaccccgcc
cagcgcgaagcggccctcgcggtcgtcggccccgtctgcatccttgccgggccgggcacc
ggcaagacccacacgatcacgcggcgcatcgcgtacggagtgcgcactggcgtctatgcg
ccggaccgcgtgctcgcgctcaccttcacgaaccgtgccgcggggcagctccgcggccga
ctcggcaccctcggcgcgtcggcagtgcaggcccgcaccttccactccgcggcgctgcga
cagctgagcttcttctggccgcaggtggtgggcggcagcttcccgggcatcgtctcgagc
aagtcgcccatcatctcggaggccgccgaccgcgccggtgtgcggctgagcccacccctg
ctgcggaaggtcgccgagcagctcgagtggcgcaaggtatcggagcgtacgctcgaccag
tttggcgaggacctcgcctcgggccgacacccgaacgagacgggcctgcccgccgagcag
ctccacgacctcgcggtgcagtacgagcgggcgaaggagtcgcggcaccagctcgacttc
gaggatgttctgctcgcgaccgcgggcatgctcgagagcgagccctggattacctcacag
gtgcggtcccaataccgcttcttcgtcgtggacgagtaccaggacatctcgccgctgcag
cacaagctgctgcggctgtggctcggcaatcgccgcgaactctgcgtggtcggcgacccc
gcccagaccatttattcgttcgcgggtgcgaacgccgactacctcaccgggttctcgagc
gagttcgccgatgcccgagtgattcgggtggacggttcctaccgttcgacgccaccgatc
atcgctgcggcaaatgagctcgcgaagcacatctcgcacgcgattcaacttgaccccctg
cgggcgcacacgggcaagttcccgcaacccgacgtccgctcgtacgagagcgatgaggcc
gaggcggcgggcgtggcccggagcatccgccacgacctcgaagcggggcgtgcccccggc
gacatcgcgattctcgtgcggacgaacgcgcaggtcggcgtgctcgagcgggcgctcgaa
gcggtcgacgtgccgttccggctcgcgggcgggatgccattcttccgccggccggaggtg
cgagccgtgctcgcggggctgcacgcggcggtcgtggcgggccaggattcgggtccactg
tttcagaccgtgagtaacgtgcttcgctcgcggggctggcagcagcagcgcccggtcgag
cccggcccgctgcgcgaggcctggggcgccatggatgcgattatgcgtttcgccgataag
gcccatgcgggcacgacgctcgcggaattcagcgccgagctcgagtcccgcgccgcgcac
cagtttgagctcccaatcgacgccgtgacgatctcgacgatgcacgcggccaagggcctc
gagtgggaccacgtctacgtcgtcggcctgcgcgaggggctcctcccgaccacggccgcc
gcgaacgaacccgagctcgtcaacgaagagcgtcgcttgttctacgtggcgctcacgcga
gctcgagaccaactgcacctatcgcatgcgctggtgcagccgccaacgcgctttctgccg
gagctcggcaaccgcatccggattggaactccacctctgcaccatcccgacgcagaccgg
taa
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