Gulosibacter sediminis: M3M28_06925
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Entry
M3M28_06925 CDS
T08132
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M3M28_06925 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsd03400
]
M3M28_06925 (ruvB)
Enzymes [BR:
gsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M28_06925 (ruvB)
DNA repair and recombination proteins [BR:
gsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M3M28_06925 (ruvB)
RecFOR pathway proteins
M3M28_06925 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
TIP49
AAA_5
AAA_16
Mg_chelatase
MCM
AAA_22
AAA_14
Zeta_toxin
Sigma54_activ_2
IstB_IS21
Rad17
AAA_3
nSTAND3
AAA_18
AAA_33
RNA_helicase
DUF815
NTPase_1
NB-ARC
AAA_24
TsaE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UQN13818
LinkDB
All DBs
Position
complement(1497439..1498437)
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AA seq
332 aa
AA seq
DB search
MTQGPLDAQRNDGELEFESTLRPRLLDEFIGQEKVREQLHLLLRAAELQQRTPDHILLAG
PPGLGKTTLAMIVGQETGQALRLTSGPALQNAGDLAAVLSSMVPGEVLFIDEIHRMARTA
EEMLYLAMEDFRIDIMVGKGAGAQSVPLELAPFTVVGATTRSGLLPAPLRDRFGFTAHLE
FYADNELERVLTRTARLLDLDAQPGALDVLASRSRGTPRIANRLLRRVRDYALVHDRPID
DVAVGEALALYDVDDLGLDRLDRAVLDTLIRRFEGGPVGVRTLAVTVGEEADTVEAVVEP
FLVRTGLIARTQRGRIATPAAYEHLGVRPGAL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacccagggcccactcgacgcgcagcggaacgacggcgaactcgagttcgagtcgacg
ctgcgcccgcggctgctcgacgaattcatcggccaggagaaggtgcgcgagcaactgcac
ctgctgttgcgggcggccgagctgcagcagcgcacgcccgaccacatcctgctcgccggc
cctcccgggctcggcaagaccaccctcgcgatgatcgtcggtcaggagaccgggcaggca
ctccggctcacctcggggcccgccctgcagaacgcgggagacctcgcggctgtgctctcg
agcatggtgccgggcgaggtgctgttcatcgacgagattcaccgcatggcccgcacggcc
gaggaaatgctctacctcgcgatggaggacttccgcatcgacatcatggtcggcaagggg
gcgggcgcacagtcggtgccgctcgaactcgcgccgtttaccgtcgtcggtgccacgact
cgctcgggcctgctgccggcgccgctgcgcgaccgtttcggcttcacggcccacctcgag
ttctacgccgacaacgagctcgagcgcgtgctgacccgcaccgcacgcctgctcgacctc
gatgcacaacccggtgcgctcgacgtgctcgcgtcgcgctcgaggggcacgccccgcatc
gcgaaccggctgctgcggcgcgtgcgcgactacgcgctcgtgcatgaccggccgatcgac
gacgtcgccgtgggcgaggcgctcgccctctacgacgtcgacgaccttggtcttgaccgg
ctcgaccgcgcggtgcttgacacgctcatccggcgcttcgagggcgggcccgttggtgtg
cgcacgctcgccgtcacggtgggcgaggaggccgacaccgtcgaggcagtcgtcgagcca
ttcctcgtgcgtaccgggctgatcgcgcgtacccagcgcggccgcattgcaacacctgca
gcctacgagcaccttggcgtacggcctggtgccctataa
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