Gulosibacter sediminis: M3M28_07125
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Entry
M3M28_07125 CDS
T08132
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gsd
Gulosibacter sediminis
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsd03032
]
M3M28_07125
03400 DNA repair and recombination proteins [BR:
gsd03400
]
M3M28_07125
Enzymes [BR:
gsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M3M28_07125
DNA replication proteins [BR:
gsd03032
]
Prokaryotic type
DNA Topoisomerases
M3M28_07125
DNA repair and recombination proteins [BR:
gsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M3M28_07125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
UQN13845
LinkDB
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Position
1534091..1536553
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AA seq
820 aa
AA seq
DB search
MATGANGERIEDVDVSSEMQGSYLEYAYSVIYSRALPDARDGLKPVQRRILYQMTEMGLR
PDRGHVKSARVVGDVMGKLHPHGDSAIYDALVRLAQPFVQRVPLVDGHGNFGSLDDGPAA
PRYTEARLTAAALALTESLDEDVVDFVPNYDNSLQQPEVLPSAWPNLLVNGASGIAVGMA
TNMAPHNLGEVISAARHLLAHPDATLEELMEHVPGPDLPGGARIVGLDGVRDAYANGRGS
FTMRATASIEHVTARRLGIVVTELPYLVGPEKVIEKIKQGVQSKKLAGISQVTDLTDRKS
GLKLVIELKTGFAPEAVLEQLYRHTPLEDSFHINNVAIVDTAPKTLGLREMLDVYLKHRI
SAVRRRSQFRLNKHKDRLHLVDGLLIALVDIDEVIEIIRSSDDAEAARSRLMLVFDLSER
QAEYILELRLRRLTKFSRIELETEADELRRKIAELEALLADEQLLRQAVSQELADTSDQF
ATPRRTVLIADDTEIRAAKQSAKSGEVSLQSSDDPTRVIFSASGRILRVNVAEDEPFVRP
KRRTKHDAILAEISTTTLSDIGAVTNRGIVYRMTAVSLPAAPASSVLLTGGVVARDYFGI
TDKTERIVGLVPLSVSTPLAIGTRNGVVKRVNPAEWGKQHELSAIALKGDDEVVGAARAD
DADDLVFVTSDAQLLRFAASNVRPQGIGAGGMAGVRLSDGARVIGFSVVTEAQRDDAVVV
TIAEPPSDEALFADVEGSAKLTPLAEYPAKGRGTGGVRAQRFVRGESALAVGWVGPSPAH
ANAKDGAIRQLPEPVARRDASGTKLEGTVAYVGRAMGEPA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggcgcaaacggcgaacgcattgaagacgttgacgtctcgagtgagatgcag
ggatcgtacctcgagtacgcctactcggtcatctactcacgcgcgctgcccgacgcccgc
gacggcctcaagccagtgcagcggcgcatcctctaccagatgaccgagatgggcctgcgg
cccgaccgcgggcacgtgaagtcggcccgcgtcgtcggcgacgtcatgggcaagctgcac
ccgcacggcgactcggcgatctacgacgcgctcgtgcgcctcgcgcagcccttcgtgcag
cgagtgccgctcgtcgacggccacggtaacttcggctcgctcgatgacggccccgcggcg
ccccgttacacggaggcccgcctcaccgccgcggcactcgccctcaccgaatcgctcgac
gaagacgtcgtcgacttcgtgccgaactacgacaactcgctgcagcagcccgaggtgctg
ccctcggcgtggccaaacctgctcgtcaacggtgcctccggcatcgccgtcggcatggcg
acgaacatggcgccccacaacctcggcgaggtgatctcggccgcgcggcacctgctcgcg
catcccgatgccacgctcgaggaactcatggagcatgtgccgggccccgacctgccgggc
ggcgcccgcatcgtcggcctcgacggcgtgcgcgacgcctacgcgaacggccgcggctcg
ttcacgatgcgtgcgacggcctcgatcgagcacgtcacggcgcgccgcctcggcatcgtc
gtgaccgaactgccctacctggtcggccccgagaaggtcatcgagaagatcaagcagggc
gtgcagtcgaagaagctcgccggcatctcgcaggtgaccgacctcaccgaccgcaagtcg
ggcctcaagctcgtcatcgagctcaagaccggctttgcgcccgaggcggtgctcgagcag
ctgtaccggcacacgccgctcgaagactcgttccacatcaacaacgtcgcgatcgtcgac
accgcgccgaagacgctcggcctgcgcgagatgctcgacgtctatctcaagcaccgcatc
agcgccgtgcggcgccgcagccagttccgcctcaacaagcacaaggaccgcctgcacctc
gtcgacggcctactcatcgcgctcgtcgacatcgacgaggtcatcgagatcatcaggtcg
tccgacgatgccgaggcggcgcgcagccgactcatgctcgtctttgacctctcggagcgc
caggccgagtacatcctcgagctgcgcctgcgtcgcctcacgaagttctcccgcatcgaa
ctcgagaccgaggccgacgagctgcgccgcaagatcgccgagctcgaggcgctcctcgcc
gacgagcagctgctgcgccaggcggtcagccaggagctggccgacacgtccgaccagttt
gcgaccccgcgccgcaccgtgctcatcgccgacgacaccgagattcgcgcggccaagcag
agcgcgaagtcaggcgaggtgtcgctgcagtcgagcgacgacccgacgcgagtcatcttc
tcagcgagtggacgcatcctgcgcgtcaacgtggccgaggacgagccgtttgtgcgcccg
aaacgccgcacaaagcacgacgcgattctcgccgagatctcgaccacgacgctgagcgac
atcggtgccgtgacgaaccgcggcattgtctaccgcatgaccgccgtgtcgctacccgcc
gcgcccgccagctcggtgctgctcacgggcggcgtcgtggcccgtgactacttcggcatc
accgacaagaccgagcgcatcgtgggcctcgtgccgttgagcgtgtcgaccccgctcgcg
atcggcacccgcaacggcgtcgtcaagcgcgtcaaccccgcggagtggggcaagcagcac
gagctctcggccatcgcgctcaagggcgatgacgaggtcgtgggcgccgcgcgcgccgac
gacgccgacgacctcgtgttcgtcacctcggatgcgcagctgctgcggttcgcggcctcg
aacgtgcgcccgcagggcatcggcgcgggcggcatggccggcgttcgcctcagcgacggc
gcgcgcgtcattggtttctcggtcgtgaccgaggcgcagcgcgacgatgccgtcgtcgtg
accatcgccgagccgccgagcgacgaggcgctgtttgccgacgtcgagggcagcgcgaag
ctcacgccgctcgccgaatacccggcaaagggccgcggcacgggcggcgttcgcgcgcag
cgcttcgtgcggggcgaatccgccctcgcggtcggctgggtcggccccagccccgcgcac
gcgaacgcgaaggacggcgcgatccgccagctccccgaaccggtggcccgccgggatgcg
tcgggcaccaagcttgagggcacggttgcgtacgtgggccgcgcgatgggcgagcccgcc
tag
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