Geobacillus stearothermophilus: GT50_02015
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Entry
GT50_02015 CDS
T04043
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gse
Geobacillus stearothermophilus
Pathway
gse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT50_02015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gse03019
]
GT50_02015
Messenger RNA biogenesis [BR:
gse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GT50_02015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALA69086
LinkDB
All DBs
Position
complement(382921..384477)
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AA seq
518 aa
AA seq
DB search
MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKREADALKKEALLEA
KDEIHKLRTEAERDIRDRRSELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNER
QQHIEQMESKVEALVKQQQAELERISGLTRDDARQLILERVEKELSHEIAMMIKEAETRA
KEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKARREVDEHIREV
GEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLAR
RAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVLVAA
ADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL
EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatcatcatctccgctttgcttgccttagtcattggtgccgttgttggcttt
tttgttcgcaaatcgattgccgaagcgaaaatcggcggggcgaaagccgctgccgaacag
ctgattgaggaggcgaaacgcgaggcggacgccttgaaaaaagaggcgcttctcgaagcg
aaagacgagattcataaactgcgtacggaggcggagcgtgatatccgcgaccggagaagc
gagctccaaaaacaagaaaaccgcctgatgcaaaaggaggaaaatctcgaccgcaaagat
gaagcgctcaacaaacgtgaggcgttgcttgaggcaaaggaagaagcgttgaacgaaaga
caacagcatattgaacaaatggaaagcaaagtggaagcgctcgtcaaacaacaacaagcc
gaacttgaacgcatttccggcctgacgcgcgacgatgcccgccagctcattttagagcgc
gttgagaaagagctgtcgcatgagattgcgatgatgatcaaagaggcggaaacgcgggcg
aaagaggaggcagacaaacgggcaaaggcgattttgtcgcttgccatccaacgttgcgcc
gccgaccatgtcgccgaaacgactgtttccgtcgtcaatttgccaaacgacgaaatgaaa
gggcggatcatcgggcgcgaagggcggaacatccgcacgctcgagacgttgaccggcatc
gatttgatcatcgacgatacgccggaagcggtcattttgtccggatttgacccgattcgc
cgcgagacggcgcgcatcgcgctcgataagcttgtgcaagatggccgcatccatccagcg
cgcattgaggaaatggtcgaaaaggcgcgccgcgaagtggatgagcatatccgcgaagtc
ggcgaacagacgacgtttgaagtcggtgttcacggcttgcatccggatttgatcaaaatt
ttagggcggctcaagttccgaacgagctacggacaaaacgtcttaaaacactcggtggaa
gtggcgtttttagccggactgatggcggccgagcttggggaggacgaaatgctggcgcgc
cgggccggcttgcttcatgacattggcaaagcgatcgaccacgaagtggaaggaagccat
gtggaaatcggcgttgagctggcgacgaagtataaagaacatccggtcgtcatcaacagc
atcgcttcccaccatggcgatacggaaccgacgtcggtcatcgctgtgctcgtcgcggcg
gccgatgcgctgtcggcggcgcggccgggagcgcgcagcgaaacgctggaaaactatatc
cgtcgtctagagaagcttgaagaaatcgccgaatcgtacgaaggcgtggaaaaatcgtac
gccattcaagctggacgtgaagtgcgcattatggtcaaaccagatatgatcgacgatttg
gaagcgcaccggctggcgcgtgacatccgcaaacgaatcgaagaagagctcgattacccg
ggccatattaaagtgacggtcatccgcgaaacgcgggcggtcgaatacgcgaaataa
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