Geobacillus stearothermophilus: GT50_02285
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Entry
GT50_02285 CDS
T04043
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
gse
Geobacillus stearothermophilus
Pathway
gse02020
Two-component system
gse02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GT50_02285
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GT50_02285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gse03021
]
GT50_02285
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gse02035
]
GT50_02285
Transcription machinery [BR:
gse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GT50_02285
Bacterial motility proteins [BR:
gse02035
]
Flagellar system
Flagellar assembly proteins
Stator
GT50_02285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
TetR_N
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ALA69139
LinkDB
All DBs
Position
complement(441515..442270)
Genome browser
AA seq
251 aa
AA seq
DB search
MGSALKGEERKYWDEWIHGRDRHAAEELVQRYMPLVFYHVQRLSATLPSSVPKDELVSLG
LVGLYDALEKFDPSRDLKFDTYASFRIRGAILDGLRKEDWLPRSMRDKAKKIEEAIERLE
QRHMRSVTAKEIAAELGMTEEEVQAAASETFFSHWLPLGQTTVDEDEGLLSVRDDRAPLP
EEQIVKQEMIEKLAEAIGQLNEKEQLVISLFYKEELTFTEIGSLLHLSTSRISQIHAKAL
WKLRRFFEKEP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcgctaaaaggagaagaacggaaatattgggatgaatggatccatggccgc
gaccgccacgcggccgaggagctggtgcagcgctatatgccgcttgttttctaccacgtg
cagcggctttcggcgacgctgccgagctccgtgccgaaggatgagctcgtcagccttgga
ctcgtcggcttatacgatgcgttggagaaatttgatccatcgcgtgatttgaagttcgac
acgtacgcctcgttccgcatccgcggcgccattttagacggtttgcgcaaagaagactgg
ctgccgcgcagcatgcgcgataaggcaaaaaaaattgaggaagcgatcgagcggcttgaa
cagcggcacatgcgatcggtgacggcgaaagagatcgccgctgagctcgggatgacggaa
gaggaagtgcaggcggcggcgagtgaaacgtttttttcccattggctgccgctcgggcag
acgaccgtcgacgaagatgaaggactgctttcggttcgcgacgaccgcgctccgcttccc
gaggagcaaatcgttaagcaggaaatgatcgaaaagctggctgaagccatcggacagctg
aatgaaaaagagcagctcgtcatcagtttgttttacaaagaggagctgacgtttacagaa
atcgggagccttttgcatttgtcgacatcaagaatttcgcaaattcatgcgaaagcgctt
tggaaactgcgccgcttttttgaaaaagagccatga
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