Geobacillus stearothermophilus: GT50_02460
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Entry
GT50_02460 CDS
T04043
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gse
Geobacillus stearothermophilus
Brite
KEGG Orthology (KO) [BR:
gse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gse03032
]
GT50_02460
03400 DNA repair and recombination proteins [BR:
gse03400
]
GT50_02460
Enzymes [BR:
gse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GT50_02460
DNA replication proteins [BR:
gse03032
]
Prokaryotic type
DNA Topoisomerases
GT50_02460
DNA repair and recombination proteins [BR:
gse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GT50_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALA69174
LinkDB
All DBs
Position
complement(471269..473344)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDHGYEPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLAHMLDLDIHSECRVVFHEITKDAIQQ
SFQHPRAINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDRER
EIREFQPEEYWTIQATFQKEGETFAASFYSIDGQKRDLKTEADVKAVLDHLNGTAFVVKT
VTKRERKRSPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVAETAQQEAAAYIEATFGAMYVNQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELENNGVVFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRILPDLEEEETVESETIESKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEKEMRAVEIKDEPAGIDCEVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCREGNIVERSTKRKRVFYGCDRFPDCDFVSWDKPLARPC
PKCAGLLVEKELKKGVQVQCTACDYEERLEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttagttatcgtcgaatcgccaacgaaagcgaagacgatcgaacgatac
ttgggaaaaaaatatacagtcaaagcgtcgatgggccacgtccgcgatttgccaaaaagc
caaatgggcgttgatatagaccacggctacgagccgaaatacattacgatccgcggcaaa
ggccaggtgatcaaagagttgaaaacggcggcgaaaaaagcgaaaaaagtgtttcttgcc
gccgaccccgatcgcgaaggagaggcgattgcctggcatttggcccacatgctcgatctg
gacattcactctgaatgccgcgttgtctttcatgagatcacgaaggatgctattcagcaa
tcgtttcagcacccgcgcgcgatcaatatgaatcttgttgacgcccagcaggcgcggcgc
gtgctcgaccgcctcgtcggctataacatcagcccgctcttatggaaaaaggtgaaaaaa
ggattaagcgccggccgcgtccaatcggtggcgctgcgcctcatcatcgatcgggaacga
gaaattcgcgaatttcagccggaagaatattggacgattcaagcgacgtttcaaaaagaa
ggagagacgtttgccgcctcgttttacagtattgacggacaaaagcgcgatttaaagacg
gaggcggatgtgaaagccgtgctggaccacttaaacggaacggcatttgtggtgaaaacg
gtgacaaaacgagagcgcaagcgcagccccgtgccgccgtttacgacgtcgtcgcttcag
caggaagcggcgcgcaaactgaatttccggacgaaaaagacgatgatgatcgcccagcag
ctgtacgaaggaatcgatcttggcagcgaagggacggtcggtttgatcacgtatatgcgc
accgattcaacgcgcgtcgccgagacggcgcagcaagaggcggcggcatatatcgaggcg
acgttcggcgctatgtatgtcaaccaggaaaagcggaaagagaagaaaagcacgaacgcc
caagacgcccatgaagcgatccgcccgacatcggcatttcgcgatccggacaaagtgaaa
ccgtatttgacgcgcgaccagtttcggttgtataaactcatttgggaacggttcatcgcc
agtcaaatggcggccgccgtgcttgacaccatgagcgtcgagttggaaaacaacggtgtc
gtgttccgcgccagcggctcgaaggtgaaatttccaggttttatgaaagtgtatattgaa
ggaacggacgatcaaacggaagagcaggaccgtatcctcccggatttggaagaagaggaa
acggttgagagcgaaacgatcgaatcgaagcagcactttactcagccgccgccgcgctac
acggaagcccgcctcgtcaaaacgttggaggaactcggaatcggccgcccgtcgacgtat
gccccgacgcttgatacgatccaaaaacgcaactatgtcgtccttgagaacaagcggttt
gtcccgaccgagctcggcgaaatcgttgtagagctgatgctcgaatttttcccggaaatt
atcgatgtcgagtttacggcgaaaatggaaaaagaattggacgaaattgaagaagggaaa
gtggaatggatcaaagtcgtcgacgagttttaccgcgaatttgaaaaacggttgaaagtg
gcggaaaaagaaatgcgcgcagttgagattaaggatgagccggccggcattgactgcgag
gtgtgcggcagtccgatggtgtacaaaatgggccgtttcggcaagtttatcgcctgctcg
aattttccggaatgccgccatacgaagccgattgtcaaagaaatcggcgtcaagtgcccg
aaatgccgcgagggcaacatcgtcgagcgcagcacgaaaagaaagcgggtgttttacggc
tgcgaccgtttcccggattgcgacttcgtctcgtgggataaaccgctcgcccgcccgtgt
ccgaaatgcgcggggctgcttgtggagaaagagctgaaaaaaggtgtgcaagtgcaatgc
acggcgtgcgactatgaggagcggctagaagcctga
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