Geobacillus stearothermophilus: GT50_09985
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Entry
GT50_09985 CDS
T04043
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gse
Geobacillus stearothermophilus
Pathway
gse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GT50_09985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gse03021
]
GT50_09985
03400 DNA repair and recombination proteins [BR:
gse03400
]
GT50_09985
Enzymes [BR:
gse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GT50_09985
Transcription machinery [BR:
gse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GT50_09985
DNA repair and recombination proteins [BR:
gse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GT50_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
BSH_YknX
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ALA70486
LinkDB
All DBs
Position
1884148..1887747
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNKFEYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRAYREKYGQSFQASMGAEAIKKLLQ
DIDLDKEVAALKEELKTAQGQRRARIIKRLEVLEAFRSSGNDPAWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKKGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVHPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAIGEGMVFKDTDEALLAYHNGYVHLHSRIAIH
AGSLKNETFTEEQNNKLLLTTVGKLIFNEILPNSFPYINEPTTENIEGRTPDKYFLDKGV
NVREEIRKRELVPPFKKKVLGQIIAEVFKRFKITETSKMLDRMKDLGFQYSTKAGITIGV
ADIVVLPEKQEILDEAQAKVDTVLKQFRRGLITDEERYERVISIWSAAKDKIQDRLMKSL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGILARALTDGTEVVVKLE
ERLVGRYAHKTVRHPETGEVIVRKDEMITEDIANEIIKAGITEVWIRSVFACNTRHGVCK
KCYGRNMATGMDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQELF
EARNPKGQAVISEIDGTVISINETRDNQYEIVVQSEVETRTYVAPYNARLKVEEGQRVER
GQELTEGSVDPKQLLRVRDITSVQEYLLREVQKVYRMQGVEISDKHIEVMVRQMLRKVRV
IDAGDTDVLPGTLLDVHQFTDVNAKALREGKRPATARQVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMARYRKVKPAVKKETAGGTVSSK
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtcaataagtttgagtacatgaaaattgggctcgcttccccggagaaaatt
cgttcttggtcgtatggcgaagtcaaaaagccggagacaatcaactatcggacgttaaag
ccggaaaaagacggcttgttttgcgagcgcattttcggtccgacgaaagactgggaatgc
cattgcggcaaatataaacgcgttcgctacaaaggcgtcgtctgcgaccgctgcggcgtc
gaagtgacgcgctcgaaagtccgccgcgaacggatgggccatatcgagctggctgccccc
gtttcgcacatctggtatttcaaaggcatcccgagccggatggggttggttcttgacatg
tcgccgcgggcgctcgaagaggtcatttattttgcatcctatgtcgtcaccgacccgggt
gatacgccgcttgagaaaaagcagctgttgtcggaaaaggaataccgcgcctatcgcgag
aagtacggtcaatcgttccaagcgtcgatgggggcggaggcgatcaaaaagctgctccaa
gacattgatttggataaagaggtggccgcgctgaaagaagagctgaaaacggcgcaaggg
caacggcgcgcccgcatcattaagcggcttgaagtgcttgaagcgttccgcagttcaggg
aacgacccggcatggatggtgcttgatgtactgccggtcattccgccggagttgcgcccg
atggttcagcttgacggcgggcggtttgcaacatcggatttgaacgatttgtaccgccgc
gtcatcaaccgtaacaaccggctgaaacggctgcttgatctcggtgcgccgaacattatc
gtccaaaatgagaagcggatgctgcaagaggcggttgatgctttgatcgataacggccgc
cgcggccgtccggtgaccggtccggggaaccgtccgttaaaatcgctttctcatatgctg
aaagggaagaaagggcgcttccggcaaaacttgctcggcaaacgcgttgattattccggc
cgctccgtcatcgtcgtcggcccaaacttaaaaatgtatcaatgcgggctgccgaaagaa
atggcgctagagttgttcaagccgttcgtcatgaaggagcttgtggagcgggggttggcg
cataacattaaaagcgcgaaacggaaaatcgagcgcgtccatccggaagtgtgggatgtg
cttgaagatgtcatcaaagaacatccggtgctgttaaaccgcgctccgacgctgcaccgt
ctcggcattcaggcgtttgaaccaacgcttgtggaagggcgggcgatccgtcttcatccg
cttgtttgcacggcgtacaacgctgactttgacggcgaccaaatggcggtgcacgtgccg
ctgtcagctgaggcgcaagccgaagcgcgcttgttgatgttggcggcgcaaaacattttg
aacccgaaagatgggaagccggtcgtgacaccatcacaagacatggtgttgggcaactac
tacttgacgatggagcgcgagggagccatcggcgaaggcatggtgttcaaagacacggac
gaggcgctgcttgcttaccataacggctacgtccatctccattcgcgcatcgccattcat
gccggttcgctgaaaaatgaaacgtttaccgaagagcaaaacaacaagttgctcttaacg
accgtcggaaagctcattttcaacgaaattttgccgaattcgttcccgtacatcaacgag
ccgacgacggaaaacattgaagggcggacgccggacaagtacttccttgacaaaggggtc
aacgtgcgcgaagaaattcgcaagcgcgaactcgtgccgccgtttaagaaaaaagtgctc
gggcaaattatcgctgaagtgttcaaacggttcaaaatcaccgaaacatcgaagatgctc
gaccgcatgaaagaccttggcttccaatattcgacgaaggccggcatcacgatcggcgtg
gccgatatcgtcgtcctgccggaaaaacaagaaattttggatgaagcgcaagcgaaagtc
gatacggttttgaagcagttccgccgcggcttaattacggacgaagagcggtacgagcgc
gtcatctccatctggagcgcggcgaaagacaaaattcaagaccggttgatgaagtcgctt
gataaacgcaacccgatctttatgatgagcgattccggagcgcgcgggaacgcgtcgaac
tttacgcagcttgcggggatgcgtggtttgatggccaacccggccggccggatcattgag
ctgccgatcaagtcgtcgttccgcgaaggcttgacggtattggaatactttatctcgacg
cacggcgcgcgaaaaggattggcggatacggcgctcaaaacggccgactcaggctatctc
acgcgccgccttgtcgacgtggcccaagacgtcatcgtccgcgaagaagattgcggcacc
gaccgcggcattttggcgcgggcgctgacggatggcacggaagttgtcgtcaagcttgaa
gagcggcttgtcggccgctatgcgcacaaaacggtgcgccatccggaaacgggcgaagtg
atcgtccgcaaagacgagatgatcaccgaagatatcgccaatgagatcattaaagccggc
attacggaagtatggattcgctccgtattcgcctgcaacacgcgccatggcgtctgcaaa
aaatgttacggccgcaacatggcgaccggcatggacgtcgaagttggcgaagccgtcggc
attatcgccgctcagtcgatcggcgagccgggcacgcagctgacaatgcggacgttccat
acaggcggcgtcgccggcgacgatatcactcaaggtttgccacgggtgcaagagctgttt
gaagcgcgcaacccgaaagggcaagcggtcatttctgaaatcgacggcacggttatttcg
attaatgaaacgcgcgacaaccaatatgaaatcgtcgtgcaaagcgaggtcgaaacgcgt
acgtatgtagcgccgtacaacgcgcggctgaaagtcgaagaaggtcagcgcgtcgaacga
ggccaagagctgacagaaggctcggtcgacccgaaacagttgctgcgcgtgcgcgatatt
acatccgttcaagagtacttgcttcgtgaagtgcaaaaagtgtaccggatgcaaggggtg
gagatcagcgacaagcatatcgaggtcatggtgcggcaaatgctgcgcaaagtgcgcgtc
atcgatgccggcgacaccgatgtgctgccgggtacgcttttggatgtccaccagtttacg
gatgtcaacgccaaagctcttcgcgaagggaaacggccggcaacggcccgccaggtgttg
ctcggcatcacgaaagcgtcgcttgagacggattcattcttgtctgctgcttcgttccaa
gaaacgacgcgcgtcttgaccgatgcagcgatcaaaggaaaacgtgatgaattgcttggc
ttaaaagaaaacgtcattatcggcaaactcgtcccggctggaaccggtatggcccgctac
cggaaagtgaagccggccgtcaaaaaggaaacggctggcggcacggtgtcgtccaaataa
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