KEGG   Geobacillus stearothermophilus: GT50_16320
Entry
GT50_16320        CDS       T04043                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
gse  Geobacillus stearothermophilus
Brite
KEGG Orthology (KO) [BR:gse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gse03400]
    GT50_16320
Enzymes [BR:gse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     GT50_16320
DNA repair and recombination proteins [BR:gse03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GT50_16320
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII RNase_H_2 DEDDh_C Helicase_C NTP_transf_3 DNA_pol_A_exo1 SNF2-rel_dom
Other DBs
NCBI-ProteinID: ALA71559
LinkDB
Position
3084235..3086964
AA seq 909 aa
MATRFVIIDLETTGNGPKKGDRIIQLGMAVVEDGLIVERFASFFNPEQPIPLFIQQLTNI
NEQMVEGAPLFADKAGEIAALMHGAYFVAHNVDFDLPFLQAELERAGWPPFAGPTIDTVE
LARIVLPTAESYKLGDLARQLGLRHDRPHQADSDAEVTAKLFIALLKRLSRLPLMTLEQL
RGLARHLKSDIYLLLDAVIAKKRNKAPADRAVAVYRGIALKQPAPEPDESDRRPALASFA
AFCEQEPPLPLPGYKRRAGQWEMMRLVYEALSTSQHALIEAGTGLGKSLAYLIPAAFFAC
EQQERVVISTHTLQLQEQLIRRDWPVLRQIAPFPLRVAVLKGKQNYLSLDKFASFLSEPS
DTYDAALLKCQVLVWLLETDSGDLDELNVSSGARLLLSALAIGEEEDGGRHHFFARAKER
SERADVVITNHALLLHDLTGPAPLLPPFRHLIIDEAHRLEDAAARCFGEQIGYVSFRLLT
AKIAQTIAKWQEAEQDAPNGALVRCQQRLEELQFEGDELFRLLRRYALDKKPARAGRCRY
RFSPTDEQSRAWQAAVELCWRLRDLAAALSAEAKPLLSADTSGDFPPSALLSADLAALNR
QMAALVRLLTEKEPGVVRWIEADEKGAANAVRLYSQPVDLADFFADQLFMKKRSVVLTSA
TLTVRGRFTYMAARLGLEDFYPLCRSFPPPFRYEEQAALFVPADMPLVSAVPLEDYAEAV
AASVLAIARRLGRRVLVLFPSYELLKLTVDALKTEEEGEPFVLIAQGVQSGSPAKLLRTF
LQFEHAVLFGTSSFWEGVDLPGSALDVLVIARLPFAPPDDPVMEAKSERIRLEGGDPFSE
LALPEAVLRFKQGFGRLIRTEDDKGAVFVLDRRLMASPYGADFLASLPPLSVHEGALSEL
LDKAETWLS
NT seq 2730 nt   +upstreamnt  +downstreamnt
atggcaacgcgctttgtcatcattgacttggagacaaccggaaatgggccgaaaaaaggc
gatcggatcatccagctcggcatggcggtcgtcgaagatggcctgattgtcgaacggttt
gccagcttttttaacccggaacagcccattccgctgttcattcagcaactgacgaacatc
aacgaacagatggtcgaaggagcgccgctgtttgctgacaaggcgggcgagatcgccgcc
ttgatgcacggtgcttactttgtcgcccataacgtcgactttgatttgccgtttttgcag
gccgagcttgaacgggctggctggccgccgtttgccggtccgacgatcgatacggtcgag
ctcgcccgcatcgtgttgccgactgccgaaagctataagctcggcgatttggcgaggcag
ctcggcctccgccacgatcgtccgcatcaagcggacagcgatgcggaagtgaccgccaag
ctgttcattgccttgctcaagcggctctcccgtctgccgcttatgacgcttgagcaactg
cgcggtcttgcccgccacttgaaaagcgatatttacttgctccttgatgcggtcatcgcc
aaaaagcggaacaaggcgccggccgaccgcgctgtcgccgtataccgcggcattgcgttg
aaacaaccggcgccggagccagatgagagcgatcggcgccccgctttggcttcgttcgct
gccttttgcgaacaggagccgccccttccgcttcccggctacaagcggcgcgcggggcag
tgggagatgatgcggctcgtttatgaggcgctgtcgacgtcccagcacgcgctcattgaa
gcagggaccggacttggcaaatcgctcgcctatttgattcccgctgctttttttgcctgt
gagcagcaagagcgggtcgtcatcagcacgcataccctccagctgcaggagcagctcatt
cgccgcgattggccggtattgcggcaaatcgcgccgtttccgctccgcgttgccgttttg
aaaggaaagcaaaattacttatcccttgacaagttcgcttcgtttttgtcggagccgtct
gacacgtacgatgcggcgctcttgaaatgccaggtgctcgtttggctgcttgagaccgac
agcggcgacttggacgaattgaatgtgtcatccggcgcccgtctcctattgtccgcgctt
gccatcggcgaagaggaagacggcgggcggcatcattttttcgcccgggcgaaagagcgc
tccgaacgggcggatgtggtcattaccaaccatgcgcttttgcttcatgatttgaccggc
ccggcgccgcttttgccgccgtttcgccatctgatcatcgatgaggcgcatcggcttgaa
gatgccgccgcccggtgttttggcgagcagattggctatgtgtcgtttcgcctgctgacc
gccaaaatcgcgcagacgatcgcgaaatggcaagaagcagaacaggacgcaccgaatggg
gctcttgtccgttgccagcagcgccttgaggagctgcagtttgaaggggacgagctgttc
cgcctgttgcgccgctatgcgttggacaaaaagccagctcgcgctggacgttgccgctat
cgcttttcgccgacggacgaacagagccgggcgtggcaggcggcggtggagttatgctgg
cgcctgcgcgatttggcggcggcgctatccgctgaagcgaagccgcttctatccgctgat
acgagtggcgatttcccaccatccgccttgctgtcggctgatttggcggctctcaaccgg
caaatggctgcgcttgtgcgtttgctgaccgaaaaggagccgggtgtcgtccggtggatc
gaagcggacgaaaaaggggcggcgaacgctgtccgcctttactcgcagccggttgacctt
gctgactttttcgccgatcaactgtttatgaaaaaacggagcgtcgttttgacgtcggcg
acgctcacggtccgcggccggttcacgtatatggcggcgcgtctcggtcttgaggatttt
tatccactttgccgctcgtttccgccgccgtttcgttacgaggagcaggccgcgctcttc
gtgccggcggacatgccgctcgtttctgccgtgccgcttgaagattacgccgaagcggtc
gccgcttcggtgcttgcgatcgcccgacgcctcggacggcgggtgcttgtgttgttccct
tcgtatgaactgttgaaactgacggttgatgcgttgaagacggaggaagaaggcgagccg
tttgttttgatcgctcaaggggtgcaaagcggcagtccggcaaagctcttgcggacgttt
ttgcagtttgagcatgcggtgttgtttgggacgagcagcttttgggaaggggtcgatctg
ccaggttcagcgctcgatgtgcttgtcatcgcccgcttgccgtttgcgcccccggacgat
cccgtgatggaggcaaaaagcgagcgcattcgcctagaaggcggcgatccgttttccgag
ctggcgcttcctgaggcggtgcttcgttttaagcaagggtttggccgcctcattcgcact
gaagacgacaaaggagccgtatttgtgctggatcggcggctgatggcttccccgtacggc
gcggattttctcgcttccttgccgccgctttcggtgcatgaaggcgcgctttctgagctg
ctcgacaaggcggaaacttggctttcttaa

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