Geobacillus stearothermophilus: GT50_16615
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Entry
GT50_16615 CDS
T04043
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gse
Geobacillus stearothermophilus
Pathway
gse00061
Fatty acid biosynthesis
gse00071
Fatty acid degradation
gse01100
Metabolic pathways
gse01212
Fatty acid metabolism
gse02024
Quorum sensing
gse04146
Peroxisome
Module
gse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GT50_16615
00071 Fatty acid degradation
GT50_16615
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GT50_16615
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT50_16615
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gse01004
]
GT50_16615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gse04147
]
GT50_16615
Enzymes [BR:
gse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GT50_16615
Lipid biosynthesis proteins [BR:
gse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GT50_16615
Exosome [BR:
gse04147
]
Exosomal proteins
Exosomal proteins of breast milk
GT50_16615
Exosomal proteins of breast cancer cells
GT50_16615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LANA1_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
ALA71598
LinkDB
All DBs
Position
3146981..3148636
Genome browser
AA seq
551 aa
AA seq
DB search
MDKTRPYWPSGLPKELRYVLGEQPLYHYLRHRGEREENEPAYIFYNKVITWGTLLDHVRR
FARYLQEKGVRKGSYVALYMQNCPQYIIAHFAIQQLGGVIVPLNPMYRESELAYFFAEVP
LVGIIAGEEGVPRVRQAEQQTAPLSFIVTCHYGDYADPAGGIPLCAELVQPKQSDSAADD
FAAIIAAYPPLDEDASIDLWNDVGLIIFTSGTTGRPKGAMLTYGNALFKTAASAQANRLT
EKPETLMTHSPLCHIAGMVMGLNTPVYTGHPCVLFTRFDPMATIKAIETYKVTAWYSIAP
MNAAILQALAATSADLSSLKRNLATSFGLPVTKDLAERWAEATGGCLLYEAAYGLSETHT
CDTFMPDDCVKFGSCGIPTYETDIRIIDPETKRELGPGQSGEIVVKNPGVFQGYFRRDGA
TNETLKDGWVYTGDIGYIDEDGYLYFQGRLKEMIKVSGYSVFPEDVEALLNEHPAVKQCA
VIGVPDPMKGEVPKAFVVLHDSHKGKVAPSDLIEWAKTHMAAFKYPRYIEFIDELPATPS
GKVLRKLLPRE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaacacgcccgtactggccgagcgggctgcctaaggagctccgctacgtgctc
ggcgaacagccgctctatcattatttgcgccatcgcggcgaacgcgaggaaaacgagccg
gcgtacatcttctacaacaaggtgatcacttggggaacattgctggatcacgtccgccgt
tttgcccgctatttgcaggaaaaaggggtgaggaaagggagctatgtcgccttgtacatg
caaaactgtccgcaatacatcatcgcccacttcgccatccagcagttaggcggcgtcatc
gtcccgctcaacccgatgtaccgggaatcggagctcgcctattttttcgctgaagtgccg
cttgtcggcatcatcgccggagaggaaggagtgccgcgcgttcgacaagccgaacaacaa
acagcgcctctgtcgtttatcgtcacgtgccactacggcgattacgccgatccggcaggg
ggcatcccgctttgcgctgagcttgtgcaaccgaagcagtcggatagcgccgcggacgat
tttgcggccatcatcgccgcctatccgccgcttgatgaagacgcctccattgacttatgg
aacgatgtcgggttgatcatttttacatcgggtacgaccggtcggccgaaaggagcgatg
ctcacctatggcaatgcgttatttaagacagccgcatccgcccaggcaaaccggctgacg
gaaaaaccggaaacgttgatgacccattccccgctttgccatatcgccgggatggtgatg
ggactgaatacgccggtgtacacgggacatccatgcgtgctgtttacccgctttgacccg
atggcgacgatcaaagccatcgaaacgtacaaagtcacggcatggtacagcatcgcgccg
atgaatgcggccattttgcaagcgctcgcagccacctctgccgacttgtcaagtttaaaa
cgcaacttggcgacgagcttcggtctgccggtgacgaaagaccttgccgagcggtgggcg
gaagcgaccggcggctgcctgttgtacgaagccgcctacgggctgagcgagacgcatacg
tgcgacacgtttatgccggatgactgtgtgaaatttggctcgtgcggcatcccgacatat
gagacggacatccgcatcatcgatccggaaacgaaacgggagcttgggcctgggcagtcg
ggggaaattgtcgtcaaaaatccgggggtttttcaaggctacttccgccgcgatggcgcg
acgaacgagacgctgaaagacgggtgggtgtacactggcgatatcgggtatatcgatgaa
gacggctatttgtatttccaagggcggttgaaagaaatgatcaaagtgtccggctacagc
gtctttccggaagacgtcgaggcgctgttgaacgaacatccggccgtcaagcaatgtgcg
gtcatcggcgtgcctgacccgatgaaaggggaagtgccgaaagcgtttgttgttctccat
gattcgcataaaggaaaggtggcgccgtctgacttgatcgaatgggcgaaaacgcatatg
gcggcgttcaagtatccgcgttatatcgagttcattgatgaattgccggcgacgccgtcc
ggcaaagtattgcgaaagctgcttccgagggaataa
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