Globicatella sanguinis: CYJ72_006280
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Entry
CYJ72_006280 CDS
T09094
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gsg
Globicatella sanguinis
Pathway
gsg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYJ72_006280 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsg03021
]
CYJ72_006280 (rpoC)
03400 DNA repair and recombination proteins [BR:
gsg03400
]
CYJ72_006280 (rpoC)
Enzymes [BR:
gsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYJ72_006280 (rpoC)
Transcription machinery [BR:
gsg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYJ72_006280 (rpoC)
DNA repair and recombination proteins [BR:
gsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYJ72_006280 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
WIK65556
LinkDB
All DBs
Position
1438806..1442447
Genome browser
AA seq
1213 aa
AA seq
DB search
MIDVNNFEAMQIGLASSEKIRSWSYGEVKKPETINYRTLKPERDGLFCERIFGPTKDWEC
SCGKLKRVRYKGRVCDRCGVEVTKAKVRRERMGHIELAAPVTHVWYFKGIPSRMGLVLDI
SPRYLEEVIYFASYIVIDPGDTPLEFKSLLTEAEYREKKREYGDRFYAKMGAEAVKELLE
MVDVEKEVEELREILKTATGQKRTRAIRRLDILDAFNESGNKPEWMVLDVLPVIPPDIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRAVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMKELVEREIASNIKNAKRMIETQDDAIWPVIEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLSEEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEEPGRIGEGLVLSSVGEAEIAYQNGYVHLHTRVAIP
AKALPGKPFTEWQKERLMVTTIGKLFFNEIMPIEFPYLNEPTNTNLTQQTPDKYFLEPGT
DVPEAIAAMEMVPPFKKKDFGNIIAEVFKRFQITETSVMLDKLKNLGYKYSTRAGITVGV
ADVLRLESKEGILEEAHKKVENITKQYRRGLITEDERYGSVIRTWEQAKDKIQDDLKSSL
PRLNPIHMMSDSGARGNISNFTQLAGMRGNMAAPSGKIIELPITSNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIVREDDCGTDKGIVITEIADGNSVIESLE
ERLIGRYTQKTVRHPETGEVIIGPNELISEDLAATIVNAGIKEVTIRSVFTCNTQHGVCK
KCYGRNLATGSEVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGGGDITQGLPRIQEI
FEARNPKGQATITEVAGVVESIEEKAGDRSKDITIAGNGDTRTYNVAYQARLKVKEGDMV
ERGQALTEGSIDPKELLRVTDVITVEKYLLREVQAVYRGQGVEIGDKHVEVMVRQMLRKV
RVMDPAGTKILPGALMDIADFARANASSIKAGEIPATARPVLLGITKAALETNSFISAAS
FQETTRVLTDAAIRGKKDVLLGLKENVTIGKLIPAGTGMTRYRNIKSNLDVQAELNEAEA
IAATEVTETTEVE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgttaataatttcgaagccatgcaaattggcttagcatcctccgaaaaaatt
cgtagttggtcatacggtgaagtaaaaaaacctgaaaccattaactaccgtacattaaaa
cctgaacgtgacggattattctgtgaacgtattttcggaccaactaaagattgggaatgt
agctgtggtaaattaaaacgcgttcgttataaaggacgcgtctgtgatcgctgtggtgtt
gaagtaacgaaagcaaaagtacgtcgtgaaagaatgggacatattgaattagctgctcca
gttacacacgtatggtatttcaaaggaattccaagtcgtatgggattagtattggatatt
agtccacgttacttagaagaagtgatttactttgcttcatacatcgttattgatccaggt
gataccccgttagaatttaaatcattgttaacggaagcagaatatcgtgagaaaaaacgc
gaatacggtgaccgtttctatgccaaaatgggtgcagaagccgttaaagaattattagaa
atggtagacgttgaaaaagaagttgaagaattaagagaaatcttaaaaacagcaactggt
caaaaacgtacacgtgcgattcgccgtttagacatcttagatgctttcaatgaatcaggt
aataaaccagaatggatggtattagatgtcctaccagttatcccacctgatattcgtcca
atggttcaattagaaggtggacgttttgcgacaagtgacttgaatgatctataccgtcgt
gttattaaccgtaataaccgtttgaaacgcttattagatttaggtgctcctggtattatt
gttcaaaacgaaaaacgtatgttacaagaagcggttgacgctttaatcgataatggccgt
cgtggtcgtgccgtaacgggaccaggtaaccgtccattaaaatctttatcgcatatgtta
aaagggaaacaaggtcgtttccgtcaaaacttattaggtaaacgtgtagactactcgggg
cgttctgttatcgtcgttggacctaacttaaaaatgtaccaatgtggtttaccaaaagaa
atggcaattgaattattcaagccttttgtaatgaaagaattagttgaacgtgaaattgct
agcaacatcaaaaatgctaaacgtatgattgaaactcaagatgatgcgatttggcctgta
attgaagaagttattcgtgaacatccagtgttgcttaaccgtgcacctacgcttcaccgt
ttaggaattcaagctttcgagccaacattagttgaaggtcgcgcaatccgtctacaccca
ttagtgtgtgaggcatataatgccgactttgacggggaccaaatggcggtacacgtacct
ttatcagaagaagcacaagcagaagcacgtttgttaatgctagcagcgcaaaacatctta
aaccctaaagatggtaaacctgttgtaacaccatctcaagatatggtcttaggtaactat
tatctaactttagaagaaccaggacgtatcggtgaaggtttagtgttaagtagtgtgggt
gaagcagaaatcgcttatcaaaatggttatgtacatttacatacacgtgttgccattcca
gctaaagcattacctggaaaaccatttactgaatggcaaaaagaacgtttaatggtgaca
acaattggtaaattattcttcaatgaaattatgccaatagagtttccttacttaaacgaa
ccgactaatactaacctaacccaacaaacacctgataaatatttcttagaaccgggaaca
gatgtaccagaagcgattgctgcaatggagatggtaccaccgtttaagaaaaaagacttt
ggtaatattatcgcagaagtcttcaaacgattccaaattacagaaacgtctgtgatgttg
gacaaattgaaaaacttaggttacaagtattcaacacgtgctggtattactgttggggtt
gccgatgtattacgtctagaatctaaagagggtattttagaggaagcacataaaaaagtt
gaaaatatcacaaaacaatatcgtcgtggtttaattaccgaagatgaacgttatggaagt
gttattcgtacttgggaacaagcaaaagataagattcaagatgatcttaagagttcatta
ccaagattaaacccaatccatatgatgtcggattcaggtgcccgtggtaatatctctaac
tttactcaattagcgggtatgcgtggtaacatggcggcgccaagtggtaagattatcgaa
ttaccgattacatcaaacttccgtgaaggattatcggtattagagatgtttatttctact
cacggtgctcgtaaagggatgaccgatacggccttgaagacagccgactcaggttattta
acacgtcgtttagttgacgtagcgcaagatgtgatcgttcgtgaagacgactgtggtacg
gataaagggattgtgattaccgaaattgcagacggaaatagtgtgattgagtcattagaa
gaacgattaattggtcgttatactcaaaaaacagtccgtcatcctgaaacaggtgaggta
attattggaccaaatgaattaatttctgaagatttagcagcgactatcgtcaatgcaggt
attaaagaagtaacgattcgttcagtctttacatgtaatacacaacatggtgtatgtaaa
aaatgttatggccgtaacttggcgaccggatctgaagtagaagttggggaagcggtcgga
acgatcgcagctcaatcaatcggagaacctggtactcagttaaccatgcgtactttccat
accggaggggttgcgggtggtggcgatatcactcaaggtttacctcgtattcaagagatt
tttgaagcgcgtaatcctaaaggacaagcgactattacggaagtagccggtgttgtggaa
tcgatcgaagaaaaagcgggcgaccgttcgaaagatattacgatagctggtaacggtgat
actcgtacttataatgttgcttatcaagcacgcttgaaagtaaaagaaggcgatatggtt
gaacgtggtcaagcattgacggaaggttccattgatccaaaagaattgttacgtgttact
gacgtgattacagttgaaaaatacttattacgtgaagtacaagcggtataccgtggccaa
ggggtagagattggcgataaacacgtcgaagtaatggttcgtcaaatgttacgtaaagta
cgcgttatggaccctgcaggcacaaaaattctaccaggtgctttaatggatatcgcagac
tttgctcgtgcgaatgcatcttctattaaagcgggagaaatccctgcgacggcgcgtcca
gtgttattaggaattaccaaagcagccttagaaacgaattcatttatttctgctgcatcc
ttccaagaaacaactcgtgtcttaacagatgcagccattcgcggtaagaaagatgtctta
ttaggactaaaagagaatgttacaattggtaaattaatccctgctggtactggtatgacc
agatatcgtaatatcaaatcaaacctagacgtacaagcagaattaaacgaggctgaagca
atagcagcgaccgaagtaactgaaaccacagaagtagaataa
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