Globicatella sanguinis: CYJ72_007445
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Entry
CYJ72_007445 CDS
T09094
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gsg
Globicatella sanguinis
Pathway
gsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYJ72_007445 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsg03021
]
CYJ72_007445 (rho)
03019 Messenger RNA biogenesis [BR:
gsg03019
]
CYJ72_007445 (rho)
Transcription machinery [BR:
gsg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CYJ72_007445 (rho)
Messenger RNA biogenesis [BR:
gsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CYJ72_007445 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WIK65763
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All DBs
Position
1661784..1663082
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AA seq
432 aa
AA seq
DB search
MSDAFSLKTLIAAEVKQLYVYAKELEIPNYSQLSKKELALAVMRTQEEKQGFYQVEGVLD
IVGGDGFGFIRPINFSPSQEDIYISSSQIRRFDLRNGDKVAGPARPPKSNERYPGLMQVS
SVNGKNPEEAKNRDHFPSLTAIYPDHQIKLESGSKWIANRMIDIIAPIGFGQRGIIVSPP
KAGKTTVLKEIANGITSNYPDTELIVLLIDERPEEVTDIERSVEGEVVSSTFDQLPENHV
RISELVLERAMRLVEDGRDVVILMDSITRLARAYNLVVKPSGRTLSGGVDPAAFYLPKRF
FGAARNVENGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLSRQWAERRIFPAVDI
LRSGTRKEELLMSEEKLQHIWKLRNLMGEDVLQYTQQVIELLERTDNNEVAFQQLTAFLN
AMSSNKKSSKKG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatgcattttcactaaaaacattaatagctgcggaagtaaagcagttatatgtt
tatgcgaaagaattagagataccgaactacagtcaacttagtaagaaagaacttgcactc
gcagttatgcgtacacaagaagaaaaacaaggtttttatcaagttgaaggggtcttggat
attgtaggcggcgatggctttggctttattagacctatcaatttttctcccagtcaagaa
gatatttatatctctagttctcaaataagacgttttgatttaagaaatggagataaagta
gcaggaccagcacgtccaccaaaatctaatgaacgttatcctggcttaatgcaagtaagt
tcagtgaatggtaaaaatcctgaagaggctaaaaatcgcgatcattttccaagtttaaca
gccatctacccggatcatcaaataaaattagaaagtggttctaaatggattgctaatcga
atgattgatattatagcgcctattggttttgggcaacgtggtattattgtttcgccaccc
aaagcaggtaaaacaaccgttttgaaggaaattgcgaatgggattacaagcaattatccc
gatacagaattaattgttcttttaattgatgaacgacctgaagaagtaacggatattgaa
cgcagtgttgaaggagaagtagtatcttcaacctttgatcaattaccagaaaatcatgtt
cggattagtgaactcgtgttagaaagagctatgcgtttagtcgaagatggacgtgatgtc
gtgatcttgatggatagtattactcgcttggcacgagcttataatttagtagtcaaacca
agtggtcgtactttaagtggtggggtagatcctgcggcattttatctacctaaacgcttc
tttggagctgcgcgtaatgttgaaaacggtggctcgttaacgatcttagcaaccgcatta
gttgacactggtagccgaatggacgatgttatttatgaagagtttaaagggaccggtaat
atggaattacatctatcgcgtcaatgggcagaaagaagaatttttcctgcggtggatatc
ttgcgttctggtacacgtaaagaagaacttttaatgtctgaagaaaaattacaacatatt
tggaaattacgcaatttaatgggtgaagatgttttacaatatacacaacaagtaattgaa
ttgctggaaagaacagataataatgaagtagcctttcaacaattgacagcttttttaaac
gcgatgtcgtccaataagaaaagtagtaagaagggttaa
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