Geotrypetes seraphini (Gaboon caecilian): 117345469
Help
Entry
117345469 CDS
T09159
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117345469 (DHX35)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117345469 (DHX35)
Spliceosome [BR:
gsh03041
]
Complex C
Other components
Complex C specific factors
117345469 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
ABC_tran
AAA_22
DEAD
AAA_19
Cas3-like_C_2
AAA_7
UPF0203
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117345469
NCBI-ProteinID:
XP_033770052
UniProt:
A0A6P8N3U7
LinkDB
All DBs
Position
11:134701000..134758673
Genome browser
AA seq
703 aa
AA seq
DB search
MAAPWAAVKFWKPGTEGPGINISEERQSAAEASGTSIIYNPHAAFSIEQQRQKLPVFKLR
NHILYLVENYQTVVIIGETGCGKSTQIPQYLSEAGWTAEGKVVGVTQPRRVAAVSVAGRV
AEERGAVLGHEVGYCIRFDDCTDSQATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHE
RTLYTDIAVGLLKKVQKKRGDLRLIVASATLDAEKFKDFFNQNETSDPNKDTCAILTIEG
RTFPVDIFYTQSPVPDYVRYTVETVMKIHQTEKDGDILAFLTGQEEVETVVSGLIEQARI
MSRSGMKRHLRVLPMYAGLPSSEQMKVFERVSHSVRKVIVATNIAETSITISGIVFVTDC
GFVKLRAYNPKTAIESLVLVPVSQASANQRAGRSGRNRSGECYRLYTEEDFMKLPLSTVP
EMQRTNLAPVILQLKALGIDNVLRFHFLSPPPAQSMVQALELLYALGGLDKNCRLTEPLG
VRMAEFPLNPMFAKMLLESGNFGCSAEILSIAAMMQIQNIFVIPPNQKALAVREHRKFAV
EEGDHLTMLNVYEAFIKHNKSSQWCQKHFLNYKGLVRATVVREQLKRLLSKFKVPKKSSE
GDPDPILRCIVSGFFANAAKLHSTGVYRTVRDDHELHIHPMSVLYAEKPPQWVVFNEVVQ
TAKFYMRDVTAVESSWLLELAPHFYQQGTHLSRSTKRAKVDEL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctgggctgcggtgaagttctggaagccaggcactgagggcccaggtatt
aatatctcagaagagcggcaaagtgcagctgaagccagtggaacttctatcatctataat
cctcatgcagccttttctatagaacaacagcgacaaaagctcccagtgtttaagctccga
aaccatatcctgtacttagtagagaactatcagactgtggtgatcattggagaaacagga
tgtgggaagagcacccagattccacaatatctgtccgaagctggctggactgcagaaggg
aaagtggtgggtgtgacacagcctcgaagagttgctgcagtatcagttgcaggacgagtg
gctgaagagcgaggtgctgtgctgggccatgaggtcgggtattgcattcggttcgatgac
tgtacagactcacaagcaacgagaattaagtttttgaccgatggcatgctggtccgggag
atgatggctgaccctttattaaagaaatacagtgtccttatgttggatgaagctcatgaa
agaaccttgtataccgatattgctgttggcttattgaaaaaggttcagaagaagcgtggt
gatctgcggctaatagtggcctcggccacacttgatgctgagaaattcaaggatttcttt
aatcagaatgagaccagtgatcccaacaaagacacctgtgccattctcactatagaagga
agaacttttcccgtggatattttttatacacaaagccctgttccagattatgtcagatat
actgtggagactgtgatgaagattcaccagactgagaaggatggagatattttggcattt
ttaacagggcaggaggaagtagagactgttgtttctgggttgatagaacaagcacgcata
atgtctcgatctggaatgaagcggcatctgcgtgttctccccatgtatgctggacttcct
tcttctgaacagatgaaagtgtttgagagggtgtcgcacagtgtcagaaaggtaatagtg
gccaccaatatcgcagagacctccatcaccataagcggcattgtgtttgtgactgactgt
ggatttgtgaaactgagggcctataatcccaagacggccatcgagtccctcgtactagtg
cccgtgtcccaggcgtcggccaatcaaagagctggccgcagtggccgaaaccgctcaggg
gaatgttacaggctttacacagaggaagactttatgaagctgccactttctaccgtccca
gagatgcagcgcactaacctggctcccgtgattctgcaactcaaagctctgggtatagac
aacgtgctcagatttcatttcctgtctcctccacctgcacagtcaatggttcaagctctg
gagctgctctacgctttaggaggcctagacaaaaattgtcgcctgacggaacctctgggc
gtgagaatggctgaattccctttaaaccctatgtttgcaaagatgctgctggaatcaggg
aattttggttgttcagccgagattttgagtattgcagccatgatgcagattcagaatatc
tttgtgattccacccaaccagaaagctcttgcggtccgggagcacaggaaatttgctgtg
gaagaaggcgaccatctgactatgcttaatgtttatgaagctttcatcaagcataataag
agttcccagtggtgccagaagcactttctgaattacaagggccttgtgagggccacggtt
gtaagagagcaactgaaaagacttctcagcaagtttaaagtgcccaagaagtccagtgaa
ggtgaccccgatcctattctgaggtgcatagtatcgggattctttgctaatgctgctaaa
cttcactccacaggtgtttacaggacagttcgagatgaccatgagttgcacatccaccct
atgtctgttctctatgcagagaaacctcctcagtgggtggtgtttaatgaggtcgtacag
actgccaagttctacatgcgggacgtgactgcagttgaatcctcctggcttttggagctg
gcaccgcacttctatcagcagggaacgcatctttcaaggagtaccaagagagccaaagtg
gatgaactgtga
DBGET
integrated database retrieval system
