Geotrypetes seraphini (Gaboon caecilian): 117345474
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Entry
117345474 CDS
T09159
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117345474 (CACNA1H)
04020 Calcium signaling pathway
117345474 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117345474 (CACNA1H)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117345474 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117345474
NCBI-ProteinID:
XP_033770063
UniProt:
A0A6P8P4M1
LinkDB
All DBs
Position
11:7287234..7591927
Genome browser
AA seq
2325 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVNCNSERCRILEAFDNFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWSGLLRNRCFLDNDSSTNYSFSILQPYYQVDGGEE
NPFICSSPQDNGMLKCQDIPPKKEFGIECSLPVDNGSLHLHSTDTGSRNSCINWNQYYNV
CKKGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICH
ICRKVKRRTFRLYINWQNKRRKKVNPNSAMNGQGRNRRSKRRMTSIHHLIHHHHHHHHHY
HISNGSPRGPRSSPEVCDLEMKIMKPKDRLALPPPSPNLQSPPPSSESVHSIYHADCHVE
GPQMKGKPSNPPANFKLSVGLKNYSNMNYPTILPSPTSKSISTAVPQIKKSNSGSVPVIN
SPGSLKADPYEKLHHLIGEHGICRSSSRLSGLSVPCSLPSPQPSPATCELQSCPYCANIL
ENQQLELSESESCESDSNGVYEFTQDVQHGGQRDWMQQRPKKNKKKTKAKAKRGNRVTKL
WAAFGNRLKRIVDSKYFNRGIMIAILINTLSMGIEYHEQPEELTNALEISNIVFTSMFGL
EMLLKLMAFGLFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFM
PALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLEIDGGDTIPDRKNFD
SLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGF
QAEGDATRSDTDEDKASANFDEDLEKFKDLRATELKMYSLAVTPNGHLEPRGTIPPPIIM
RTVPTPMPTPKSSQFMDSVHSFGDSRRGSNASMDPSNYDQKSLSSLRSSPCTPWGTYSNW
GSRRSSWNSMSRAPSLKKKNQKGERESLLSGEGKGSTDDESDDCKSSTVSRGSLLRRAES
LDTRGSVDLPELLQVPIMRNSLNIGPMAMVPADYQDCNGKMVHVPNEYLMRTDTQKDDPL
DYDDDMEDSYCYRIRKMLEPYKPEWCKAHEDWSLYLFSPQNGFRTMCQKVIAHKMFDHVV
LVFIFLNCITIALERPDIDPVSTERVFLSVSNYIFTAIFVAEMMVKVVALGFYSGENAYL
QSSWNVLDGVLVFVSIIDIIVSLASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVV
ETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGLDTKNITNRSDCLEARYKW
IRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVAIDIQPVRNHNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYHADYSPA
RKYIHTMCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLEEALKYCNYVFTIVFVFEALL
KLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVL
KLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKMVCNDENPCEGLS
RHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECSSDDKHCLTYLPFISPVYFVTFVLI
AQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMSRGLTSPSSADSCIPGKANSPS
HDTPELEMPTKQAMDNAAYMKGRRESQNLLTVRKIAISRMHSLPNDSYMFRPVMPAKAPY
PLHEVEANEEKSPTGSVTSVHSQPGEMGSIQNLPVDCCLLSAVVPCPQEPDDQPKIPPLQ
VPAQSPSFNKEVIRTDSVEHQNADAKDSFGMGLQDALKPKMPSQSTLTLPSLHPPPLSGE
GIQQPSSLFSPRGRCSSVRTRKHAYSQHSIPSRPSSRNSGLTDTGESSDLADEEVRHINS
LAKGWRRQSEIRSHSVSPFISPGSPPPVLLKTCNSTTSLAESNNKEKDLKKFCSVDTQGF
LTKPTWADDQRRHSIEICPSIDDGDSSFGQLNNQKVGFSIHAQSESEYIHGVRRKKKMSP
PCISIDPPMEDENSTTSRTKVSESSMLLRRRTPSCESTAYRDSLDPVENQPGDQPTKMDR
RVQPPCRGEHLAIPNYSFDQSDASSLSSLSDLFSDSGQSTPSSVASIDSRLDTVALELKN
ADHIQIHCENTEQKQEPVDGTKCLMGNQGLAHTAHTTEEEVDELV
NT seq
6978 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatccttctgaactgtgtcaccttggggatgttccagccctgtgaagatgtg
aattgtaactccgagaggtgcagaatactggaggcttttgataacttcatttttgcattt
tttgctgtggagatggttatcaagatggtcgctctaggaatctttggacaaaaatgttac
ctcggggacacatggaaccgtctagatttcttcatcgtcatggcagggatgatggaatat
tcacttgatgggcacaatgtgagcttatctgccatccgaactgtccgagttctcaggcct
ctaagagccattaacagggttccaagtatgcgaatactggtcaccctgctgttagatact
ctgcctatgttaggcaacgtccttctcttgtgttttttcgtctttttcatctttggcatc
gttggtgtccagctgtggtcaggactgctaagaaacaggtgtttcctggacaacgattct
tcaacgaattatagcttttctattttgcagccgtattatcaagtcgacggcggggaagaa
aatccattcatctgctcatcccctcaagacaacggcatgctcaagtgccaagatatccca
cccaagaaggaatttgggatcgaatgctccctgcccgtagacaacggtagcctccatttg
cacagcacagatactggaagcaggaacagctgcataaactggaaccagtattacaacgta
tgcaagaagggggatgtgaacccgcacaatggagctattaatttcgataatattggctat
gcctggattgctatttttcaggttataaccttggaaggatgggttgacatcatgtattac
gtaatggatgcacattcgttttacaatttcatatactttatactacttataatagtcggg
tctttcttcatgattaacttgtgcctggttgtgatagcaacacaattttctgaaacaaag
cagcgggaaaaccagctaatgcaagaacagcgggcccgttacctttccaacgacagcaca
atcgccagcttctcagaaccgggcagctgctatgaggagctccttaagtacatttgccac
atctgcaggaaggtcaaacggcggactttccgactctacatcaactggcagaacaagcgc
cggaaaaaggtcaaccccaacagcgcaatgaatgggcagggccgtaaccgcaggagtaag
cggaggatgacatcaatccatcatctgatccaccaccaccaccatcatcaccatcactac
cacatcagcaacgggagtcccagaggacccaggtcaagccctgaggtctgtgacctggaa
atgaagatcatgaagcctaaagatcgactggcacttccacctccatcccccaaccttcaa
agccctcccccgagcagtgagtccgtccatagcatttaccatgctgactgccacgtggaa
ggtccccaaatgaagggcaagccttccaaccctccagcaaattttaaactctctgttggg
ctcaaaaattatagcaacatgaactatccaactatcttaccttccccgaccagcaaaagc
atctctacggcagtgccccaaatcaagaaaagcaacagcggttcagttcctgtgatcaac
agtccagggagtttgaaggctgacccctatgagaaactccatcacttgataggagagcat
ggtatctgtaggtcttccagcagactgtctggtttgagtgttccatgctctctaccgagc
ccccaacccagccctgcaacgtgtgagcttcagagctgcccctactgtgcaaacatcttg
gagaaccaacagcttgagctcagcgagtcagagagctgcgagtcagactccaacggggtc
tacgagttcacccaagacgttcagcatggaggccaaagagactggatgcagcagcggccc
aaaaagaacaagaagaagacgaaggccaaggcaaagcgcggcaaccgagtgaccaaactg
tgggcagcttttggcaacagactgaaaaggattgtggacagcaaatacttcaatcgtggg
attatgatagcgatattgatcaacacgttgagcatgggaattgaatatcacgagcagcct
gaagaactgaccaacgccctggagatcagcaacattgtattcaccagtatgtttggcctg
gaaatgctgctaaagctgatggcttttggactctttggctacattaaaaacccctacaac
atttttgatgggatcatagtgattatcagtgtgtgggagatcattgggcagtcagacgga
ggcctctctgtcctgaggacgtttcgcttgctgagggtcctcaagctggtgcgcttcatg
cccgccctccggcgtcagttggtggtcctgatgaagaccatggataacgtggccacgttt
tgtatgttgctcatgctcttcatcttcattttcagcatcctaggaatgcatctctttgga
tgtaagtttagcctggagatcgatggtggagacacaattcccgaccggaaaaactttgac
tctttgctgtgggccattgtaactgtctttcagattctcacccaagaagactggaacgtt
gtcctctacaatgggatggcgtctacttcatcttgggcggctctctacttcgtggctcta
atgacatttggaaattacgtgctcttcaatctcttagtggccatcctcgtagaaggtttc
caagcagagggtgatgcaaccaggtccgatactgacgaagacaaagcgtcggccaacttc
gatgaggatttagagaaattcaaagacctccgagccactgagctgaagatgtactcactt
gccgtaacaccgaatgggcacttagagcctcgtgggaccatcccccctcctatcatcatg
cgtactgttcctacacctatgcctaccccaaagagctcccagtttatggattccgtgcac
agttttggagactcaagaagaggaagcaacgcatccatggacccatcaaactatgaccag
aagtccttgtccagcctccgcagttctccctgtacaccgtggggtacctatagcaactgg
gggagccggcgctccagctggaatagcatgagcagagccccaagcctcaaaaagaagaat
cagaaaggggaaagggagtccttgctgtctggtgaagggaaagggagcacggacgacgag
tctgacgactgcaagtccagcactgtgagcagagggtcgctgctccgtcgagctgaatct
ctcgataccagaggttctgtggacttgcctgagcttcttcaggtgcccatcatgcggaac
tctctcaatatcggtccaatggctatggtacccgcagactaccaggactgcaatggcaag
atggtgcacgtacccaatgagtacttaatgcgcaccgacacgcagaaagatgatccactg
gactatgatgatgacatggaggatagttactgctacagaatccgtaagatgctggagcca
tacaagccggaatggtgtaaagcacacgaagactggtctctctatttgttctccccccag
aatggtttccgcaccatgtgccagaaagttatagcacacaagatgtttgaccatgtggtt
cttgtctttatcttcttgaactgcatcactatcgccctggagagacccgatattgaccca
gtcagcacagaaagggtatttctgagtgtctccaattatatcttcactgccatttttgtt
gctgagatgatggttaaggtggtggccctaggtttttactcgggggagaatgcgtatctc
cagagcagctggaacgtcttggacggtgtcctggtctttgtctccatcatcgatatcatc
gtgtccttggcgtctgcaggcggggcaaagattctggggattcttcgggttctgagactg
ctacgcaccctgaggccccttcgggtcatcagtcgagccccaggcctgaagctggtggta
gaaacactgatatcatctctgaggcccattggcaacatcgtgctgatatgctgtgcattt
ttcatcatcttcgggatcttaggggtgcagcttttcaaaggcaaattctactactgtgaa
ggactggacactaagaatatcaccaacaggtccgactgcttagaggcccgctacaagtgg
atccggagaaagtacaactttgataacctggggcaggcccttatgtcactctttgtcctc
tcgtccaaagatggctgggtgaacatcatgtatgacggcttggatgcagtcgccattgac
atacagccagtaagaaaccataacccctggatgctgctctacttcatctccttcctactc
atcgtcagcttctttgtgttgaacatgtttgtcggggtagtggtggagaacttccacaag
tgccggcaacaccaggaggctgaggaggcacggcgccgggaggagaaacgcctccgtcgc
ctggagaaaaagcgcagaaaagcccagaggaggccttaccatgcggactattcccctgct
cggaaatacatccacactatgtgtaccagccattacctggacctctttatcaccttcatc
atcggggtgaatgttatcaccatgtccatggagcactacaatcaaccaaagtccctggag
gaagctctgaagtattgtaactacgtcttcactatcgtgtttgtgtttgaagctcttctc
aagctggtagcatttggattccgaaggttctttaaagaccggtggaaccagctggacctt
gctatcgtgcttctctctatcatgggaattaccctggaagaaatcgaaatcaacgcctcg
ctccccatcaaccccaccatcatccgcatcatgagagtgctgaggatcgcaagagttctg
aagctcctgaaaatggccaccgggatgcgcgctttgctggatacggtagtgcaggcatta
ccccaggtaggaaaccttgggctacttttcatgctcctgttttttatctatgctgccctg
ggagtagaactgtttgggaagatggtgtgcaacgatgaaaacccctgtgaaggcctgagc
aggcacgccacctttgaaaactttgggatggcctttcttacccttttcagagtctctact
ggtgacaactggaacggaataatgaaggacacgctccgagagtgcagcagtgatgacaaa
cattgcctgacctacctgcccttcatctcgccggtctatttcgtcacctttgttctgatc
gcgcagttcgtcctggtgaacgtcgtggtggctgtgttgatgaagcacctggaggagagc
aataaggaggccaaggaggacgccgagatggacgccgagatcgaaatggagatgtcgcga
gggctgacgtcccccagcagcgccgatagctgcatccctggcaaggccaacagtccgagc
cacgacacgccggaactagagatgccgacaaagcaagctatggataatgctgcttacatg
aaaggaaggagggagtcgcagaatctgctcaccgtgcgaaagattgccatatccaggatg
cactcgttacccaatgatagctatatgttccgccctgtcatgccagccaaagccccttac
ccacttcatgaagtggaggcaaatgaggagaaatcgccaacaggatctgtcacgtcggtt
cattctcagcctggggagatgggctcgatacagaaccttcctgtggactgttgtctcctg
tctgctgtagttccctgtcctcaagagccagatgatcagcccaagattccacctctacaa
gttccagcacagtctcctagcttcaacaaggaggtcattagaacagattccgttgagcat
cagaatgcggacgccaaggacagtttcggcatgggactccaggatgctctgaagccgaag
atgccatcacagagtacgttgactcttccttcactccaccctccgccactctctggagaa
ggcatccaacaaccctcctccttgttttcaccacgtggaagatgctccagcgtccgcaca
cgcaagcatgcatacagccagcacagtattccaagcaggccttctagtcgcaacagtggt
ctcactgacactggagaatcgtcggacctggccgatgaagaggtcaggcacataaacagc
ttagcaaagggctggagaagacaatctgaaatcaggagccactcggtctctcctttcatc
tctccaggttcacctccaccggttcttctgaagacctgcaacagcacaaccagcctggct
gagagcaacaacaaagaaaaagacttgaaaaaattttgcagtgttgatacccaagggttc
ttgaccaagcctacctgggcagatgaccaaagaaggcactccattgagatctgcccatcc
attgatgatggggattctagctttggacaactcaacaatcagaaggttggcttttcaatc
catgctcagtcagaatctgagtatattcatggtgttagaaggaagaaaaaaatgagcccg
ccttgtatttctatagatcctcccatggaggatgagaacagtacgacctcgcgtaccaaa
gtgtctgaaagtagcatgttgctaaggaggagaaccccttcctgtgaatcgacagcatat
agggactccttggaccctgtagaaaaccaaccaggggaccagcctactaaaatggaccga
cgggtccaaccaccctgtagaggtgagcatttggccataccaaattactcctttgatcag
tcagatgccagctcgttgagcagtctctctgaccttttttccgatagcggccagtctacg
ccatcttcagtagcctccatagactcccggctggacaccgtggcactagaacttaaaaat
gcggaccatatacaaattcattgtgaaaacactgagcaaaaacaagagcctgtggatggc
acaaaatgcctcatggggaatcagggacttgcccacacggctcacacaacagaagaggag
gtggacgaactagtatag
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integrated database retrieval system
