Geotrypetes seraphini (Gaboon caecilian): 117345518
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Entry
117345518 CDS
T09159
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04020
Calcium signaling pathway
gsh04080
Neuroactive ligand-receptor interaction
gsh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117345518 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117345518 (GRIN2A)
04082 Neuroactive ligand signaling
117345518 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117345518 (GRIN2A)
Ion channels [BR:
gsh04040
]
Ligand-gated channels
Glutamate (ionotropic)
117345518 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117345518
NCBI-ProteinID:
XP_033770173
UniProt:
A0A6P8P4X0
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All DBs
Position
11:37558268..37981043
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AA seq
1457 aa
AA seq
DB search
MGRTGSALLLLPALLVQLDFVCGEEISYPVLNIAVLLGRTRYITERDIRSFWTKEMSSNA
DVNVITLLVNQTDPKSIITHICDLMSGTKIHGVIFGDDTDQEAIAQILDFISSQTFIPIL
GIDGGSSMIMAEKDSMSTFFQFGASVQQQAIVMLNIMEEYDWHSFSIVTSTFPGYRDFIS
FIKNTVENSFVGWEVLNVITLDTSFGDAKSQIQMKKIHSSVILLYCSKDEAADILNEARS
LGLTGYGYIWIVPSLTTGNTDIIPPEFPSGLISVSYDEWDYTLETRVRDGLGIITTGASR
MLEKYSFIPETKSSCYGQLERNEIPSNALHKFMMNVTWDGKDLSFTEDGYQANPKLVVIV
LNTEREWEKVGKWENKSLNLKYPVWPRFSSFLDSDPDDNHLSIVTLEEAPFVIVENVDFM
TGTCVKNTVPCRKHQRLNNSTTEGSYVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKH
GKKIKNVWNGMIGEVVYKRAAMAVGSLTINEERSEAVDFSVPFVETGISVMVSRSNGTVS
PSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAKGKAPHGPSFTIGKAV
WLLWGLVFNNSVPVQNPKGTTSKIIVSIWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL
SDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHQYMAKYNQKGVQDALVSLKTGKL
DAFIYDAAVLNYMAGRDEGCKLVTIGSGYVFATTGYGIALQKGSRWKRPIDLALLQFVGD
GEMEELETLWLTGICHTEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYWKL
RFCFTGVCSGKPGLLFSISRGIYSCIHGVHIEEKKKTPDFTLTSSQTNMLKILRAEKNMT
NVSKLNPTQANSPIRTSDYIHRGSLLTDMTIDKGNLIFADNRSFQAKENMHTGDNINELP
VFASNQHKENLNNYVFQGQHPLTLNESNPNTVEVAVSAEAKVNSRPRQLWKKSVETLRQH
QSSLKENGLEKNKPAAQNQRFLPEDGVHSDASENSSRVPCHVEPENNNKHHKVKNNVKKR
SVSSKHPRDCSEVELTYLKSKQSSARDKIYTIETDKESSFRRNNPPQFNENVVIAEDVEY
PEVYQDHSDAYRKAEPVALINRTPMHNDGILPNNSQYKLYPKHYSLKDKNASLIKINERY
RQNSTHCRSCLSSLPSYIGHYTTRSPFKCDACLHMGNLYDIDEDQMLQESTPSMHSQNMY
EHECIHNKTAHFQKKNKLKISRQHSCDNIHDNPREINLGRSSRSASLKDNGRFIEENPYA
NMLNAPTEKLMSNKVTLFTQTLEDNKRSKSLYPDHSSDNPFLHSCHEGQQMVHGRSSSDI
YKQSLASKARNNYLRSSVKSTSSYSSRDGQIPNDMYISEDTMPYAAHKNTIYSTPRVSNS
CSNRHVFKKMPSIESDV
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggggagaactggttccgcgcttctgctgctcccagctcttctcgttcagctggatttt
gtttgcggagaagagataagctatcctgtcttgaacatcgcagtgcttttgggaaggacc
cggtacatcaccgagagagacatccggtctttctggactaaggaaatgtcatcgaacgcc
gacgttaacgtgatcaccctgctagtgaaccagaccgaccccaaaagcatcattactcat
atatgtgacctcatgtctggcaccaaaatccacggggtgatttttggagatgacacagac
caggaagcgattgctcaaattttggattttatttcttcccagacttttatcccaattttg
ggaatcgacggtgggtcctccatgatcatggcagagaaggattcgatgtccacgttcttc
cagttcggagcttcggttcagcaacaggccatcgttatgctcaacatcatggaagaatac
gactggcattccttttctatcgtaacgagcacctttcctggatatcgagatttcataagt
ttcatcaagaacacggtggaaaacagttttgtcggctgggaggtgctgaatgtgattaca
cttgatacttcctttggagatgcaaagtcacagattcagatgaagaaaatccattcttcc
gttatcctactgtattgttccaaggatgaagctgctgatattctgaatgaggctcgttcc
cttggtctcactggctacggttatatttggatagttcctagtctgactacaggcaacaca
gatatcattcctcctgagtttccatctgggctaatttcagtttcatacgatgagtgggac
tacactttggaaactcgagtgagggatggcctggggattatcaccacaggtgcatcaagg
atgcttgaaaagtactctttcatccccgaaacaaaatccagttgctatggacagctggag
aggaatgaaataccatcaaatgcccttcacaaatttatgatgaatgtaacttgggatggc
aaggatttgtccttcacagaagatgggtaccaggcaaaccctaaactggttgtgatagta
ctgaacacggagcgggagtgggagaaggtgggaaagtgggagaacaagagtctgaacctg
aaatatcctgtgtggccaaggtttagttctttcctagacagcgacccagatgacaaccat
ctgagtattgtcacactggaagaagcaccattcgtcattgttgaaaatgtggactttatg
accggaacttgtgtgaagaatactgtaccatgtcgtaagcaccaaagactcaacaactca
acgacagaaggaagttatgttaagaaatgctgtaaagggttctgcattgatatcttgaag
aaattatcaaagactgtgaagttcacctatgacctatacttggtaacgaatgggaagcat
gggaaaaaaatcaagaatgtatggaatggaatgattggtgaagtggtttataaacgggca
gctatggctgttggttcacttacgattaatgaagagcgttcagaagcggttgacttttct
gttccattcgttgaaacagggataagtgtgatggtttcaaggagtaatggcacagtttca
ccatctgcttttctagaaccttttagtgcttctgtctgggtgatgatgtttgtgatgctt
ctcattgtgtccgccatggctgtttttatatttgagtactttagtcctgtaggatataac
aggaacttagctaaagggaaagctccacatggaccttcgtttactattgggaaggcagta
tggctgctctggggcttggtctttaataactcagtacctgttcagaatcccaaaggaaca
accagcaaaattattgtgtcaatctgggccttctttgctgtcatttttctggccagttat
actgccaacttagctgcatttatgattcaagaggaatttgtggaccaagtgactgggcta
agtgataaaaagtttcaaagaccacacgactattcaccaccatttcgttttggaactgtc
ccgaatggaagcaccgagagaaacattaggaacaactacccagacatgcatcaatatatg
gcaaaatataatcagaaaggggtgcaggacgccttggtcagcttaaaaactgggaagctg
gatgccttcatttatgatgcagcagtgctgaactacatggctggaagagatgaaggctgc
aagctggtaacaataggaagtggatatgtgtttgccaccacaggctatggaatagcactc
cagaagggttcacggtggaagcggccaattgacctagccctcctccagtttgttggcgat
ggtgagatggaggagctggaaacactgtggctgacgggaatctgccacacagagaaaaat
gaagtgatgagcagtcagctggacatcgataacatggccggtgtattctatatgctggct
gcagccatggcactcagccttataaccttcatctgggagcatttattttattggaaactc
cgattctgctttacgggtgtctgttcggggaaaccaggattgctgttctcaatcagcagg
ggtatttatagctgcattcatggtgtgcatattgaagaaaagaagaaaacaccagatttt
accttgaccagttctcagacaaacatgctgaaaattctgagagcagagaaaaatatgacc
aatgtgtccaagctcaatcctactcaagcaaactctcccataaggacttctgattatatt
cacagaggttccctactgacggacatgaccatagataaggggaatttgatatttgctgac
aacaggtccttccaggcaaaggagaacatgcacactggggataacatcaatgaactacca
gtatttgccagcaatcagcataaagaaaacctcaataactatgttttccaaggccagcac
cctctaactctgaatgaatcgaatccaaacactgttgaagttgccgtcagtgcagaggcc
aaggtaaactcaaggccaaggcaactttggaagaaatccgtagaaaccctacgtcaacac
caaagttcattgaaagaaaatggccttgaaaaaaacaaacctgccgcgcagaatcagagg
tttctgccggaagatggtgtccattcggatgcctcggaaaattcgagtcgagtcccgtgt
cacgtggaaccagaaaacaataacaaacaccacaaagtcaagaataatgtgaaaaagaga
tcagtgtcctccaagcacccccgagattgcagtgaagtggagctgacatatctgaagagt
aaacaaagttcagctcgtgacaaaatttacacaattgaaacggacaaggagtcgagtttc
cgtaggaacaatcctcctcagtttaatgagaatgttgttattgcagaggatgttgaatac
cccgaggtttatcaagatcacagtgacgcctacagaaaagcagaaccagttgcgctcatt
aataggactcccatgcacaacgacggcattcttccaaacaacagtcagtataaactttat
ccaaagcactacagtttaaaggacaaaaatgcttccctaattaagataaatgagagatac
aggcaaaattccacccattgcaggagttgtctttctagtttgcccagttatataggacac
tatacaaccaggtctccatttaagtgtgatgcttgcctgcatatggggaacttgtatgac
attgatgaagatcaaatgctgcaagagtccaccccctcaatgcactcccaaaatatgtat
gagcatgaatgcatccacaataaaactgctcattttcaaaaaaagaacaagctgaaaatt
agtagacagcactcttgcgacaacatccatgataatcctagggaaataaatcttggaaga
tcctctcgtagtgcaagcttgaaagataacggaaggtttatagaggaaaatccttatgca
aacatgctcaatgccccgacagaaaaacttatgagtaacaaagtcacacttttcacccaa
actctggaggacaataaacggagcaagtctctgtaccctgatcactcttccgataatcct
tttctgcattcttgtcatgagggccagcagatggttcatgggcgaagttcctctgacatt
tataaacagtcgttagcttcaaaagccagaaataattatttaaggtcatctgtaaaatct
acatcctcatattcctccagagatggacaaatccccaatgacatgtacatttcagaggat
actatgccttatgctgcccataagaatactatatactcaactccaagggtttcaaattcc
tgcagcaacagacatgtgtttaagaaaatgcctagcattgaatctgatgtttaa
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integrated database retrieval system
