Geotrypetes seraphini (Gaboon caecilian): 117345547
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Entry
117345547 CDS
T09159
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gsh04054
]
117345547
Pattern recognition receptors [BR:
gsh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117345547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117345547
NCBI-ProteinID:
XP_033770245
UniProt:
A0A6P8P476
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All DBs
Position
11:68130653..68171189
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AA seq
944 aa
AA seq
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MNGVGTIYAVFYIEIFFLSGVESYGFRNCIRNYRNPSSYMCVQRFLQKVESAISDLPSDV
LYLNISHNNITQLTQGSFSHLQELVLLRLDCNNLEMIYDGAFENLTSLRILNISFNRIAN
LSQGAFWGLGNLTLLLLQNNNLQKIQESTFHLLKSLVTLNLSFNNLGNFSDVVHSLSPLK
NLQTLDLCGNLLYSLKHIAKFPRSLSNLSLCYNNLSIMDSQPDLFEHIQHLDLSNNHITE
HTLGKVNLQNVTHLLLANNFDLNIFMVLKNGMINAHNIDYSGLRLNNTHNLSELCSYLQN
KTMQTLSLRNNSISKLSSRMFTSCPEIKTLDLSRNVLKSIDCLEFVEKKENLEVLIVEHN
LLIELPKCNHSEFKRLHYISFRFNRILTVDYDAFSYAPQLRQLKLNINNIANLNRYALKH
LQKLQILHLDNNLITDLYKESFEDLTSLQIMNLRNNRVSVIFNETFHNLQNLYILDLGGN
KIRHLNNSSFEGLRNLSKLYLDGNQISKIDSTMFSCVHNSLQVLDLAGNQLHYISIKEKI
SPFEKLKNLLDLKLQAQQPYGINIIPPSFFKGLTSLKSLYLARNKLLSIPPDVFDDLSQL
SYLTLSDACNGIQNLPAGIFKNMTNLRELNLENIGLRSLTLEVFGNLTNLGSLILMKNAL
KIVNSSVITNLSNLSYLDLRKCPLTCTCQNSWFVGWLNNSRVQIVYPYNYSCETNPQTYI
SAIDTHICFLDIGQRLFWGTAPALILFMLLPVTYRKYYWRIKYNFYIFRSWFNEYWRWKE
EEHFKYDAFISYNSCDEAWVLQELLPNLETNNPSSFRLCLHHRDFELGRDIVDNIVDSIY
QSRKTICIISRSYLQSEWCSLEIQLASYRLFDELKDVLVLIFLEKIPDRELSAYHRMRKV
MLKKTYINWPLEPEAQKLFWTKVRKALKGSPSSEEDSSQSSIVV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgtagggaccatctacgctgttttttatattgagatattctttttatctggg
gtggagagctatggcttccgaaactgcatcagaaactacagaaaccccagcagctatatg
tgtgtccagcggttcctgcagaaggtggagagtgccatctctgatcttccatcagatgtc
ctttacctgaacatttcccacaacaatatcacccagctgactcagggaagcttcagtcac
ctccaagaactagttcttctacgcctggactgcaataacctggaaatgatctatgatgga
gcgtttgagaacctgacatctctgagaattctaaatatttctttcaacagaatagccaac
ctttcacagggggcattctgggggcttgggaatttaacactccttctgctgcaaaacaat
aatctccagaaaattcaagaaagtactttccatttattgaagagtcttgtaacactaaac
ttatccttcaacaacctgggcaatttcagtgatgttgtgcactctctctcacctctgaaa
aatctacaaaccttggatctctgtggtaatcttttatattcattaaagcatattgccaag
tttcccagatctctttccaacctctctctctgttataataacctaagtatcatggatagt
cagcctgacctttttgaacatatccaacatctcgatctgtcaaacaatcacattacagaa
catactttgggcaaagtgaacttacaaaatgtgacacatttgcttctggcaaacaatttt
gatttaaatatatttatggttctcaaaaatggaatgatcaatgcacataacatagactat
tctgggttgcgactgaataatacgcataatctgtctgaactatgctcctacttgcagaat
aaaaccatgcagacactctctttgcgcaataactctatcagcaaactaagcagtcgcatg
tttaccagctgcccagagatcaagactttagatttgtcccgaaatgtcctcaaatccatc
gattgcttggagtttgttgagaaaaaggagaatttagaagttctcattgtagagcataac
ctgttgattgaattaccaaaatgtaaccactcagagttcaaaaggctgcactatatctcc
ttcaggttcaaccgaatcttgactgttgactatgatgctttttcctatgctcctcaactt
cgacaattaaaactgaacattaacaacattgccaacttgaacaggtatgcgttgaaacac
cttcaaaaactccagatcctccatctcgataacaatctcataacagacttatacaaagag
agctttgaggacctcaccagcctccagatcatgaacttgcggaacaacagggtgtctgtg
atctttaacgaaacctttcataacctgcaaaatctctacattctggacctgggaggcaat
aaaatcagacatttaaacaattcttctttcgagggtttgagaaatttgtctaagttgtac
ctggatgggaatcagatcagtaagatagacagcaccatgttttcctgtgtgcacaattct
ctccaagtactggatctggcaggaaaccagctgcattacatttccatcaaggaaaagata
tctccatttgagaagttgaaaaatcttttggatctcaaacttcaagctcagcagccttat
ggaattaacataattccacccagcttcttcaaaggtctcacttctctgaaatccctttac
ttggcccgaaacaaacttctttccatacctccagatgtatttgatgatctgagccagctg
agctacctcaccctgtcggatgcctgcaatggcatccagaatctgccagctgggatcttc
aaaaacatgactaaccttcgagaactgaacctggagaatataggtctgcggtcccttaca
ctggaagtgtttggcaatctcaccaatctgggctcactcattctcatgaaaaatgctttg
aaaattgtgaatagcagtgtaataaccaacctgtctaacctgagctatctggacctccgc
aagtgccctctgacctgcacctgccagaacagttggtttgtgggctggctgaacaatagc
agagtgcagattgtgtatccttacaactactcctgtgaaaccaacccccaaacctacatt
tctgccattgatacccatatctgcttcctagatatagggcagcgccttttctggggaaca
gcaccagcactgattctcttcatgcttcttcctgtcacttaccgaaagtactattggcgc
attaaatacaacttctatattttccgctcttggttcaatgaatattggagatggaaagag
gaagagcacttcaagtatgacgccttcatctcttacaactcctgcgatgaggcttgggta
ttacaggagctcctgcccaatctggaaactaacaatccttcttcctttcgactttgcctc
caccacagagattttgaacttgggagggacattgtagataatattgtggatagtatctat
caaagcaggaaaactatctgcataatcagcaggagctacctgcaaagtgagtggtgctct
ttggagatccagctggctagttacaggctctttgatgaactgaaggatgttcttgtatta
atcttcttggagaagatccctgacagagaactctctgcctatcacagaatgaggaaggta
atgctgaagaagacctacatcaactggcctttggagccagaggcacaaaagcttttctgg
acaaaggtccggaaagccttgaagggaagtccctcatctgaagaggacagcagtcaatct
agcatagtagtgtaa
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