Geotrypetes seraphini (Gaboon caecilian): 117345618
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Entry
117345618 CDS
T09159
Symbol
U2AF1L4
Name
(RefSeq) splicing factor U2AF 26 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117345618 (U2AF1L4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117345618 (U2AF1L4)
Spliceosome [BR:
gsh03041
]
Complex A
U2 snRNP components
U2 related factors
117345618 (U2AF1L4)
Complex B
117345618 (U2AF1L4)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
DNA_alkylation
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117345618
NCBI-ProteinID:
XP_033770411
UniProt:
A0A6P8P4M7
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Position
11:complement(125051622..125101238)
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AA seq
235 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYQNPQNTAH
TADGSHILGHVSDVEVQEHYDNFFEEVFTELQQKYGEIEEMNICDNLGDHLVGNVYVKFR
REEDAERALAELNNRWFNGQAITAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLKPIS
SALRRQLYGRSRRARPSGFGSPPRSPKRPRSQDRYRPSDRNRRRSRSPGYRHGRF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcttcgattttcggcactgagaaagacaaagttaactgctcattt
tattttaagattggtgcttgccgccatggagatagatgctcccgacttcacaataaacca
actttcagccagaccattgtattgctgaatctgtaccagaatcctcaaaacacagcgcat
actgcagatggttctcacatcctaggccatgtcagtgacgtggaggtgcaggaacattat
gacaacttctttgaggaagtttttactgagctccagcagaagtatggtgagattgaagag
atgaatatctgtgataatcttggtgatcacctggtgggcaatgtctatgttaagttccgg
cgtgaggaggatgcagagagagccttggctgagctgaacaaccgctggtttaatggacaa
gccattactgctgagctgtcacctgtaactgacttccgggagtcttgctgccggcagtat
gagatgggggaatgcacccgtggagggttttgtaacttcatgcacctgaagcccatttct
agtgccctccggagacagttatatggacgcagtcgacgtgcacgaccttcgggattcgga
tccccacctcgctcgccaaagcgccccaggtctcaggacaggtaccgccctagcgaccgg
aatcggaggaggtcgcgttccccaggatatcgccatggacgcttctaa
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