Geotrypetes seraphini (Gaboon caecilian): 117345688
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Entry
117345688 CDS
T09159
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gsh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
gsh01100
Metabolic pathways
Module
gsh_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117345688 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117345688 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gsh01003
]
117345688 (XYLT1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
117345688 (XYLT1)
Glycosyltransferases [BR:
gsh01003
]
O-Glycan biosynthesis
Glycosaminoglycan
117345688 (XYLT1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
117345688
NCBI-ProteinID:
XP_033770600
UniProt:
A0A6P8NNE8
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Position
11:complement(29833911..30234858)
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AA seq
913 aa
AA seq
DB search
MGAAPCTRRLARRSRAALLAALTVLLVQTLLVWNFSGFDAGDESRDAGSREKRDRGSSSS
SNGGGDPRQQRRAAAADALQDPAPNGYFSHRPKEKLRTDSNNENSVPKDFENIDNSNFAP
RTQRQKHQPGLVKKPLSKQKEHLKRKLEQEEKARENSLLGKNSNEVLQYSNRTAKNSSSH
RKDSHRSSKQHHIRKSGSNSPELKYDLPPKCEISGKETISALARAKSQQCRQEIAEVYCQ
HKQGKLMPEKVTRFCPLEGKANNNVQWDEDSVEYVPTKPVRIAFVLVIHGRASRQLQRMI
KAIYHKDHFYYLHCDKRSNYLHRQVLQIASRYPNVRVTPWRMSTIWGGASLLSMYLQNMK
DLLEMKDWPWDFFINLSAADYPVRTNDHLVAFLSRYRNMNFLKSHGRDNARFIRKQGLDR
LFLECDTHMWRLGDRKIPEGIIVDGGSDWFLLNRKFVEYVTFSSDDLVAKMKRFYAHTLL
PAESFFHTVLENSPLCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHR
FQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPSGTPGLRSYWENLYDEPDGIHSISD
VMLTMYHSFSHLGLKRAETSLHTDGDNSCRYYPMGHPISVHFYFLADRFQGFLVKHHATN
LAVSKLETLETWVMPRKVFKIASPPSDFGRLQFSEIGTDWDAKERLFRNFGGLIGPMDEP
IGMQKWGKGPNVTVTVIWVDPINVIAATYDILIESNAEYTHYKPPLNLPLRPGVWTVKIL
HHWVPVAETKFLVTPLAFFNRQPIKKEELVKFHNGPPKNAYMEQNFQGLNTVLNIPVNIA
QVEDAKRNAALTGTKLEDWVDSLVSNLWSAVDICASGPTSCPVMQACSQTAWSSHSPDPK
SEMGPVKPNGRLR
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgctccgtgcactcgcaggctggcccggcgctcccgcgcggcgctgctggcc
gcgctcaccgtgctgctcgtgcagacgctgctcgtgtggaatttcagcggcttcgacgcg
ggcgacgagagccgggacgcgggcagccgcgagaagagggaccggggcagcagcagcagc
agcaacggcggcggcgatccccggcagcagcggagagcggcggcggccgatgcacttcag
gacccggcgccgaatggatatttctctcatcgaccaaaagagaaactgcgaacagacagc
aataacgaaaactctgtgccgaaagactttgaaaacattgacaacagtaactttgctcct
agaactcagaggcaaaaacaccagccggggctggtgaaaaagccccttagcaaacagaaa
gagcatttaaagcggaaactggagcaggaagaaaaggcgagggaaaattccctactgggg
aagaactcaaatgaagtgttacagtacagcaatcggactgccaagaatagcagcagccat
cgaaaggacagccacaggtcctccaagcagcaccacatcagaaagagcgggagcaactcc
cccgagcttaagtacgacctgcctccaaaatgtgagatatcaggaaaggagacaatctcg
gccctggcccgagctaaatcccagcagtgccgccaggaaattgccgaggtttactgccag
cacaaacagggaaagctgatgccggagaaggtgacgaggttctgtcctctggagggaaaa
gctaacaacaatgtccagtgggatgaagactctgtggaatatgtgcccaccaagccagtc
aggatagcgtttgtcttggtcattcacggcagagcctctcgtcagctccagcgcatgatt
aaagccatttaccacaaagaccatttttattaccttcattgcgacaagcgatccaattat
ctgcacagacaagtgctccagatagccagtcggtatccgaatgtgcgggtcaccccttgg
aggatgtcgaccatctggggaggagccagccttctttccatgtatctgcagaatatgaag
gacttgctggagatgaaagactggccctgggacttcttcattaacctcagcgccgctgac
tatccagtcaggacaaatgaccatctggttgcattcctctctagatacagaaatatgaac
ttcttgaagtcccacgggagagacaatgcaaggttcattaggaagcaggggctggacagg
cttttcctggaatgtgacacccacatgtggcgccttggagataggaagatcccagaaggc
attattgtagatggcggctcagactggtttctgttgaacaggaagtttgtagagtatgtt
actttttccagtgatgacctggtggcaaagatgaagagattctacgcccacaccttgctg
ccagctgagtccttctttcacactgtcctggagaatagtcccctctgtgataccatggtt
gacaataatctgcggatcactaactggaaccgaaagctgggctgcaaatgtcagtacaaa
cacattgttgactggtgtggctgctcccccaatgatttcaagcctgcagatttccatcga
ttccagcaaactgcaagaccgacattctttgcccgtaaatttgaagctgtggtaaaccag
gaaataattggacaactggactattatctgtacggtaactatccgtctggcacgccaggg
ctcagatcctattgggagaatctctatgatgaacccgacggcattcacagcatcagtgat
gtcatgctgactatgtatcactcgttttcccacctgggcctaaagagagccgaaacgtcc
ttgcacacagatggtgacaatagctgccggtactatcccatgggccatccaatatctgtc
cacttttattttctcgcggatcggttccaaggtttcctagtcaagcatcacgctaccaat
ttagccgttagtaaactagagacactggagacatgggtgatgccgaggaaagtgttcaag
attgctagtccccccagtgactttggaagactgcagttttctgagatcgggactgactgg
gatgccaaggaaagactgtttcggaactttggcggccttattgggccaatggatgagccc
attggcatgcagaagtggggcaagggcccgaatgtaacagtgactgtaatctgggttgac
cctatcaatgtgattgcagctacctatgacattctgatcgagtccaatgcagagtataca
cattacaaaccgccgttgaatttgccactgagacccggcgtctggaccgttaaaattttg
caccattgggtacctgtagcagaaaccaaattcctggttacgcctcttgcgttcttcaat
aggcagcctatcaagaaagaggaattggtgaagttccacaatgggcctcctaagaacgca
tacatggagcagaatttccaaggcttgaatacagttttaaatatccctgtcaacatcgct
caagtggaagacgcaaaaagaaatgcagcacttaccggcacaaagctggaggactgggtg
gactctttggtgagcaacctgtggtcggcggtggacatctgtgcttcaggcccaacttcc
tgtcctgtcatgcaggcctgtagtcaaacggcatggagttcgcatagcccagaccccaag
tcagaaatgggccctgtcaaacccaatgggcgcttgaggtag
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