Geotrypetes seraphini (Gaboon caecilian): 117345771
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Entry
117345771 CDS
T09159
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117345771 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117345771 (GSPT1)
03012 Translation factors [BR:
gsh03012
]
117345771 (GSPT1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117345771 (GSPT1)
Translation factors [BR:
gsh03012
]
Eukaryotic type
Release factors
117345771 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117345771
NCBI-ProteinID:
XP_033770791
UniProt:
A0A6P8P5S0
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All DBs
Position
11:complement(32163366..32296169)
Genome browser
AA seq
699 aa
AA seq
DB search
MQLLNRGEKTTRAAAGVQSGRGKEASLETLGAEVRTERRLRRGNTRGVVERVLSRVCSCC
LWAPGRLRRLLCRPGRALALTPSRPPFRTLVFKIATLELLLSPFPLPRARLKIKHPEMDP
IDSAPDSWEQADIDAPEAQLNSAFTKLNVNAKPFVPNVHAAEFVPAFLRPSAASDELQDD
ALDSSREDKPVSCEGLNATVSMDVSEPVVENGETEMSPEESWEHKEETSEAEPGSGSLGD
GGPSEEAQEMMEEEEEMPKPKTIIAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
KMDDPTVNWSNDRYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVEFCTWYS
GLPFIPYLDNLPNFCRSADGPVRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHN
VEVLGILSDEVETEAVSPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKTGDKSKTRPRFVKQDQVCIARLKTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgttgaacaggggggaaaaaactaccagggccgcggcgggagtgcaaagtggc
agaggaaaggaggcgtcgcttgaaacgctcggagccgaagtgcgcacggagcgtcgctta
cgtcgcggcaacacacgaggagtcgttgagcgagtgctgagtcgggtttgtagttgctgc
ttgtgggctcctgggcgccttcgccggctcctttgtcgtcccggccgcgcgctggccctt
accccctcgcgcccccccttcagaactttagtttttaaaatagccaccttggaactttta
ttatcccctttcccactcccgagagcgaggttaaaaataaaacacccggaaatggaccca
attgactcggcgccggattcgtgggaacaggcagacattgacgccccggaggcccagctc
aactcggctttcaccaagctaaacgtcaacgctaagccgttcgttcctaatgtccacgct
gcggagtttgtccctgccttcctgaggccttcggccgcctctgacgagctgcaagacgat
gcacttgattcttcacgagaagataaaccagtatcttgcgaaggtttaaatgcaactgta
agcatggatgtttcagaacctgttgtagaaaatggagagacagaaatgtctcctgaagaa
tcttgggagcacaaagaagaaacaagcgaagcagaaccaggaagtggttcactgggtgat
ggagggcccagtgaagaagctcaagaaatgatggaggaggaggaagaaatgccaaaacct
aaaaccatcatagcccccccaggtgctcctaaaaaagaacatgtaaatgtagtattcatc
ggacatgtagatgctggcaaatcaactattggaggacaaataatgtatttaacaggaatg
gttgacaaaagaacgcttgaaaaatatgaaagagaagctaaggagaaaaacagagaaact
tggtacttatcttgggctttagacacaaatcaggaagaaagagacaaaggtaaaacagta
gaagtgggccgtgcctattttgaaacggagaagaaacacttcactattctagatgctcca
gggcacaagagctttgtcccaaatatgattggtggtgcttctcaagctgatttggctgtt
ctggtaatctctgcaaggaaaggagaatttgaaactggatttgaaaaaggagggcaaacc
agagagcatgccatgcttgcaaaaacagcaggtgtaaaacatttaatagttcttataaat
aaaatggatgatccaactgtaaattggagtaatgacagatacgaagaatgcaaagaaaag
ttggtgccattcttaaagaaggttggctttaatcccaaaaaagatattcacttcatgcct
tgctcaggcctaactggggcgaatcttaaagagccagtggaattctgcacttggtacagt
ggattacctttcatcccatatctggataatttgccaaacttctgtagatcagctgatgga
ccagtgaggctgccaattgtggataaatacaaggatatgggcactgtggtgctgggaaag
ctagaatctgggtcaatttgcaaaggacagcagcttgtgatgatgccaaacaagcacaat
gtagaagtccttgggatcttatcagatgaagtagaaactgaagctgtatcccctggggaa
aacctcaaaatcagactgaaaggaatagaagaagaagagattcttcctggatttatactt
tgtgatccaaacaacttgtgtcactctggacgtacatttgatgcccagatagtgattata
gagcacaaatccatcatttgtccaggatataatgcagtgctgcacattcatacctgcatt
gaagaagttgaaataactgccttaatctgcctggtagacaaaaagacaggagacaaaagt
aaaacaagaccgcgctttgtgaaacaagatcaagtatgcattgctcgtttaaagacagca
ggaaccatctgtcttgagacattcaaagattttcctcagatgggtcgctttaccttacga
gatgaaggtaagaccattgcaattggaaaggtcctgaaattggtcccagagaaggactaa
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