Geotrypetes seraphini (Gaboon caecilian): 117345778
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Entry
117345778 CDS
T09159
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03420
Nucleotide excision repair
gsh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117345778 (ERCC4)
03460 Fanconi anemia pathway
117345778 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117345778 (ERCC4)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117345778 (ERCC4)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117345778 (ERCC4)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117345778 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
117345778
NCBI-ProteinID:
XP_033770808
UniProt:
A0A6P8P701
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All DBs
Position
11:34088244..34136816
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AA seq
950 aa
AA seq
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MPPFGLKRNVKERAGTDYVTCSLTPVSTLDLSIQSGSDDVPAGHFRLSNDFFPRFLERRV
EPVMAPLLEHENQIFLDLFHEDGLVITARGLGIDRILHSFLRLYCDPANLVLVLNTSPAE
EEYFVERLRSEGTVHLPRIVTNEISSNDRYDVYMQGGVLFVTSRILVVDFLTDRIPSTLI
TGILVYKAHKIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFQMGFCQVERVMRNLFIR
KLYLWPRFHVAVNSFLEKHKPEVVELHITMTPAMLAIQASILDIMNACLKELKRYHPALE
VEDLSLENAIGTTFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLN
LLESLRASEKVFGQNSGWLFLDSSTSMFVHARARVYRIPDHKMDKKSKTFDKMEQKQKQE
EKRELVLESSPKWEALSEVLQEIESENKESGALGGPAGRVLICASDDRTCAQLKEYITAG
AEDLLTRLYKKSFGKDEKAEELWLRERNTFKSKSKSCRVKKSSTKQKKAIKKPSLTLTQM
VGKPEEGEESGKEDIIDLENSMENAETVDLNLPSDTYYGILKEPLTVIHPLQGCGDPYAL
TRVLHEVEPRYVVLYDTELSFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTTLRKE
KEAFEQLIREKASMVIPEEREGRDETNLDLKRDATPANSSTDTRKAGGQKQKCIQQIIIV
DMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSTSDLIGSLNNGRLYTQCI
SMCRYYKRPILLIEFDPNKSFSLASRASIHQEISVNDVTSKLTLLTLHFPRLRLLWCPSP
HATAELFEELKQNRPQPDPAAAVAITADSDTIPESDCYNPGPQDFLLKLPGVNAKNCRLL
MNHVKNIAELTALSEEQLSAILGNSRSAKQLYDFIHTTYTEAVAQGKPKR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccccccttcgggttgaaacggaacgtcaaggaacgggcggggactgattacgtcacg
tgttccctcactccagtctcaactctagacctgtcgatacagtcggggagtgatgacgtt
ccagccggccacttccgcctctcgaatgattttttcccccggtttctagagagaagggtt
gagccggttatggctccgttgttagagcacgagaatcagatcttcttagacctgtttcac
gaggacgggctggtcataactgcccgagggttgggcatcgataggattctgcacagcttc
ctgcggttgtactgcgaccccgctaatctggtgctggtgttaaacaccagcccagccgaa
gaggaatattttgtggagcggctgagatcggagggaactgttcacctgcctcggattgtc
actaatgaaatttccagcaacgatcgatatgatgtttatatgcaaggcggagttttgttt
gttactagtcgaattcttgtggttgatttcctgacagatagaattccctcaactcttatt
acaggtatcctagtgtacaaagcgcacaagatcattgaatcatgccaagaagcatttatt
ttgcgtctttatcggcagaagaacaagcagggcttcatcaaagcctttacagacaatgct
gttgcctttcaaatgggcttctgccaagtggagcgcgtgatgcgaaacctctttattcgg
aaactttatctgtggcccaggtttcatgtggcagtgaactcctttttagaaaagcacaag
cccgaggtggttgaattacatataaccatgactccggccatgcttgctattcaggcctca
atactggatatcatgaacgcatgtcttaaagaactgaagagataccaccctgcccttgaa
gtagaagatttgtctttagaaaatgccattgggacaacttttgagaagacaattcgtcac
tatttagaccccttatggcaccaacttggagctaagaccaaatctttggtgcaagatttg
aagattctacgtactcttttgcagtacctctctcagtatgactgtgtcacttttctgaac
cttctagaatctctgcgagcaagtgagaaagtctttggacagaattcaggttggttgttt
ctggactccagcacgtcaatgtttgtgcatgctcgcgccagagtttaccgcattcctgac
cacaaaatggataaaaaatccaaaacatttgataaaatggaacagaagcaaaagcaagaa
gagaaaagagagctggttctggaaagcagtccaaagtgggaagctctctctgaagtattg
caagaaattgagagcgaaaacaaggagagtggtgcccttggaggcccagcaggccgagtg
ctgatttgtgccagtgatgatagaacgtgtgcgcagctcaaagagtatattactgctggt
gcagaggacctgttgacaaggctgtataagaaatcatttgggaaggatgagaaagctgaa
gaactgtggctaagagagagaaatactttcaagtcaaaaagcaagagctgtagagtcaaa
aagtcctctacaaaacaaaagaaagccatcaaaaaaccatcactgacactaacccagatg
gtgggaaaaccggaggagggggaggagagtggcaaggaagacatcattgacctggaaaac
agcatggaaaatgccgaaactgtggatctgaacttgccatcagatacatactatggcatt
ctcaaagaacccctcactgttattcacccactacagggctgcggtgacccctatgccctg
acccgggtactgcatgaagtagagccaagatacgttgtcttatatgatactgaacttagt
tttgttcgtcaattggaaatatacagagcaagcagaccaggaaaacctctgagggtttat
ttcctcatttatggaggctcaacagaggagcagcgctatctcacaaccttgaggaaagaa
aaagaagcttttgagcaactcattcgtgagaaggccagtatggttattcctgaggaaagg
gaaggcagagatgaaactaatttagatctgaagagagatgctactccagcaaattcctct
actgacacccggaaagcaggtgggcagaaacagaagtgtattcagcagataataatagta
gacatgcgtgagtttcgcagtgagctcccatctctgattcatcggcgtggtattgacata
gagccagtcacgctggaggtgggtgattatatcctcaccccagacatctgcgtggaacgg
aagagcaccagcgatttgataggctccttgaacaatggccgcctgtatacccagtgcatt
tccatgtgccggtattacaagcggcccatccttctgattgaatttgaccccaacaaatcc
ttctctcttgcttctcgagcctctatccaccaggagatttctgtcaatgacgttacatcc
aagctcacccttcttaccttgcatttcccgaggctgcgcctcctctggtgcccttcccca
catgccaccgctgaactctttgaggagctgaaacagaatcggccacagcctgacccagcg
gcagctgtggccatcacagcagattcggacacgattcccgagtctgactgctataaccct
ggcccccaagacttcctgctgaagctgccaggtgtaaatgccaagaactgccgcctgctt
atgaaccacgtgaagaacattgcagagctgacagccctgtcagaggaacaactttcagca
attctgggaaattcaaggagtgcgaagcagctctatgactttattcacactacatataca
gaagctgttgcccaaggaaaaccaaaaagatga
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