Geotrypetes seraphini (Gaboon caecilian): 117345820
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Entry
117345820 CDS
T09159
Symbol
TNRC18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_TNRC18
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
117345820
NCBI-ProteinID:
XP_033770884
UniProt:
A0A6P8NP89
LinkDB
All DBs
Position
11:12817615..13041452
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AA seq
2903 aa
AA seq
DB search
MDGRDFGPPRSVHVPPPMLSGMAMESHRVGAATAAGRLAPSSGHLTAGLAAPLPPGKYLS
SAINIHAHPGYSHLPNGLYPPYIALSHLEPPNNGGSLLAQLGQHNLFESQKDGFYLSGHA
GQSVLHPPSSISRTAANHTPGSILREKDLTGHVHKSSKESVKDSAKERMCRNDFPLLHAK
KESKNKEEPRPRSVVDLTQEARTDNERKLERVAKVTERLSPFLSEHLPNRGASSGEPKSK
NPLQTSLLSNCNGGGDSLAKVFGIEQDKCTKDLNRHDENMRPSTHAHMDRTKRCDSVVTS
VGTLHVSCTCSSPHPSQQPTKMVSSSTFPPQPVHSSMFTIFPPAKDPGKEHKVIAPTFVP
SVEAYDERNGPIQIASQARDNKSKDASKLGGLNPSGERSYSDGSRLHLSQDFSCHSDAKR
AEAVREKSSVIRTNCLALKRPVTSEPSLNRSGLGSPESREFLASKDLMKPCLENEPRACD
RDRFSRSVSKESAKVYGTLDSSRQHLDHAQLKLPEQKWKPFEMGNFATTQMAALAAQHNH
ANRVEEESKKVYLDPTTSLQRPSGGSRGTTEALHPASQGEGSAMQSLIKYSGNFAKETAA
RQSSGKKSPFGGLGNMKLDPLQLSASKIQQLLAQQCGKNIKRDPERPESAKSFGRESIGS
QGEVEVRHPPVGIAVAVARQKDNSGSKLGSSLAERDHSLSMSCIKGPGRSEDDCGDDRTR
HRDDRLLAGRLDRDQEKLLRESKEAADFTRILQAGCATNGLNSNLMVTGGPAVTGSGRWP
ADPASHLATHPWLPRTGSPSMWLTSHPYGLGHPSLHQGMTPGFPPGMASPLPSAYQLARD
PQSGQLIVIPSEHLPHFTELMERAPPIWPAMYPPTRSSLQHAHQLQLLSHQQLLRQHELY
MLQQQTIHAMELQRSAQLVERLKVNEARAEAEDKASKRSLDNAKQNLSSSGVQRKSHAAS
LAAAASYSKTVTPPPLSPPSSPVPALKAEVVHKLEEPSTQQAYSYPSAPSAHPSTPLPAA
PIMPPKEETPEDLVKKDVELEKDPPTPFQALYPDIPPDYSFQSLSASFRRPYPYLLQPSA
PTDADALAPDVPLPTEGSNHLQVSPDVKPVHLPSSEMMEPLVASTEEELLEEVKAEKEAE
MDQNEAGVCEQSMEVPNATPSKSVDSCSILLRQREDQSVVEDEQERLQKCSPVYHDVAYR
AEPETQADPANGLDTCPTHMDFEVTLMDPANDQPVKSLSSPLSEAPSLAAERKDPDTFLE
EELIGPPLKESEPMLDSSEYIEKARSYQLPSLRCLDIKPENPLAGMNALVAATEMPQACS
FLTMCGRRQREVDLEMTSDLSLDPTLLQGIVLLSEIAELDLEKRKQEVQRQEICRERPTL
ESLLAASTQMLMEVLSTPIMDNLKQDAIQLPRELNPNKKYSWMQKKDEPIYSKSSLETMD
AMELDYRMRLAELQRRYKEKQRELVKLQQRRDPEEKRDEKSRSLARRGPGRPRKRKHGSC
ALSPPMERGKSDNKSRKLSKSLLLSEDSETGEGMRKRSKGAFAEEDEMEGVSGKMKGRNR
SWDEHEGTSSFPNEIQERSRKKKRTSDQEQLASKLDKALSLTKHDKLKSPFKFSDTCGSK
QKCREGGSTKYLTPQETLLGKDGQKKRTKGLSLPLKISKEGKNKMAAKIKKMEVGLKVKG
LLKASHSPAISEISSYSYNTDSEEDDESLREEWPPQSSSVSRLRQSSLYSIVAKKSSKTA
GGFKPATRGMPAAGTLKSKQAATRTQQFCLLLREAEAGSSFSDSSEDSFDQDYSSEEEED
DDEFEEDPDECMMNGSDRLSGPALDESGLGLLARYAASALPSPVISSPLSVIQLEAKQKA
KKKEERQNLMEYTDSESEIKIRKKSPVGFLRTKKVPFELGNCSPVSSGVDTSVGSSDKAK
IEKGRKLKKLKSPKDLTFEFGQEASDDDLWTRRRSERIFLHDSSTCNVLSPTTPTSSTPV
SKPGRCGTGKGAPLSPKKEGSKGKDRKELTKQRKKGKEGPCLQSSSSSTSISSPGISDLT
TEVRVSLASPVSSNRKNKAKVKTKELKKESRGKGGAVSKLMESMAAEEDFEPNQDSSFSE
DENVTLSVLIERPPTPAPCSCIIDKEELKDGLRVLIPMDDKLLYAGHVQTVHSPDIYRVV
VEGERGNRPHIYCLEQLLQEAIIDVKPPSMRFLPEGTRIAAYWSQQYRCLYPGTVVRGSL
DQEDDGDLVTVEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAKRRSRKSSKDT
VEGKEIGLLGSEEPVVKSKGRGRKPSIKSQTGEVTLTEVIDQEDASSSASVQEKPTCLGQ
QSMKAARKNQQISSGASPTRKEEKQKSSNKMKIKKLHTQQQASYAPVFSNITGTEPFGEQ
LTTPGSFSPTDNPNGKSKTKKGRKAEETQDFGQTTKGQRKQLDNEILIKLDHEGVMSPKT
KKAKEAMMMKEDSSRTVRRERKNVLGMGYSPLVNSEVKQKTSKSKSPVEGDDPLPSNYGG
GKFDSSEDKPAKVEDQKKKAQEELDSNSSGSSSESEGEEGVNNGSQAQEDTSSTSSRAST
PMSSSNSSSSSSSSSSVSSSSSSSSSSSSTSSSSSSSSSSSTTDEDSSCSSDDEAADTQP
SSSVQQPLPQKQTKQTNKSRTSSHAQNQKQQQQKQQQSSNKSKPKKREGIHLPTTKELAK
RQRLPSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEIIRIGDCA
VFLSAGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEETNPGKKLNEGKHWDLKSSRNL
PAALQASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLDQYEQMLKTKKYQDSEDLY
YLVGTYEPITGMIYNTDGVPILC
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atggatggcagagactttggccctcccaggtctgtccacgttcctcctcctatgctctct
gggatggccatggaaagtcaccgggtcggggctgcgactgcggccggccgactcgctcct
tcctccggccacttgactgcggggctggcggcgcccctccctcctgggaaatacctctcg
tcggccatcaacatccacgctcaccctggatattcgcacttgccaaatggtttgtaccct
ccctacattgctctgagtcacctggaaccccctaacaacggaggctccctcttggcacaa
ctgggtcagcacaatctctttgagtcacaaaaagatgggttttacttatcgggccatgca
ggacagtctgtcttgcaccctccctcctctatctccagaacagcagccaatcacacacca
ggctccatactgcgtgagaaggatctcactggacatgtgcataagagttcaaaggaatct
gtgaaagactcggccaaggaaagaatgtgcaggaacgactttcctttgctccacgctaaa
aaggagagcaagaacaaggaggagcccagacccagaagtgttgtagatcttacccaggaa
gctagaacggacaatgagaggaaactggaaagggtggccaaggtcacagagcgcctgtcc
ccctttctctctgagcacttgccaaatcgaggtgccagcagtggagaaccaaagtccaag
aaccccttgcagacgtctctgttaagtaactgcaacggcggtggggattctttggcaaaa
gtgtttggtattgagcaggacaaatgtactaaggatctcaacagacacgacgagaacatg
aggccttcaacccacgctcacatggaccgaacaaaacgatgtgactctgtcgtgacctca
gttggcactttgcacgtttcatgtacctgctcttcccctcacccttcacagcagcccaca
aaaatggtttcctcttccacattccctccgcagcctgtccattccagtatgttcaccatc
tttccaccagccaaggacccaggtaaggagcacaaagtcatcgctccaacctttgtgcct
tctgtcgaggcctacgatgagaggaatggcccaatccagatcgcatcccaagccagggac
aacaaaagcaaggatgcgagcaaactaggtgggctgaacccttctggtgagagatcttac
tctgacggctctcgcctccacctatctcaggacttctcatgccacagtgatgccaaaaga
gcggaggctgtgagggagaagagctcggtgatcagaactaattgcttagcattaaaacgg
cccgtaacctccgagccttctttgaatcgatcggggcttggatctccagaaagcagggag
ttcctggcctcaaaggacttgatgaaaccgtgcttagaaaacgagccccgtgcttgcgac
agggacaggttttcaagatctgtttccaaagaatcggccaaggtgtacggcactctggac
tcttctaggcaacacctcgaccacgctcagctgaagctgccggagcaaaaatggaagcct
tttgagatgggcaactttgccaccactcagatggcggcgctagctgctcagcacaatcat
gccaaccgcgtggaggaggaatccaagaaagtctacttggaccccactaccagccttcag
aggccctcgggagggtccagagggacgactgaggctctccatccagcctcccaaggtgaa
ggatctgccatgcagagcctcatcaaatacagtggcaactttgcaaaggagacggcagcc
aggcagagcagtggaaagaagagcccgttcggaggacttggcaacatgaaactggaccca
ttgcagctgagcgcctcaaagattcagcagttgctcgcccagcagtgtgggaaaaacata
aaaagggatccagaaaggcctgaaagtgccaaatcctttggccgagagagtattggatca
caaggagaagtagaagtgaggcatcctccagtgggcatagccgtagctgttgcccgacaa
aaagataacagtggcagcaaacttggatccagcctagcagagagagaccactcgctttcc
atgagctgtataaaagggccgggccgctcagaggatgactgtggagatgacaggacgcgt
cacagggatgatcgccttctggcagggcgcttggaccgggaccaggagaagctgctcaga
gaaagcaaggaagctgctgatttcactcgcatacttcaagctggctgtgccacaaatggg
ttgaattccaacttgatggtgacgggaggaccagctgtaactggctcgggacgatggcct
gccgatcctgcctcccacttggcaactcacccttggcttcccaggactggtagcccttcg
atgtggctcaccagccacccctacggtttgggtcatccttccttgcaccaagggatgacc
ccaggattccctcctggcatggcgagcccgcttccttcggcctatcagcttgctagagac
ccccagtccgggcaactcatagtgattcccagtgaacatttaccgcactttacggaactg
atggaacgagcacctcctatctggccagctatgtatccgcctaccagaagctcgcttcag
catgcgcaccagctccagctcttgtctcatcagcagctgctgcggcagcatgagctgtat
atgctccagcagcaaacgatccatgcgatggagctgcagaggagtgcccagttggtggaa
agattaaaggtaaacgaggcacgggcggaggctgaagacaaagcttcgaaaagaagtttg
gacaacgctaagcaaaacctgtcgtcctctggcgtgcaacgaaagtcgcacgctgcgtct
ctagctgctgctgcgtcctacagcaagactgtgacccctccccctctgtctcccccctcc
tcccctgtgcccgcactcaaagcggaagtggtccacaaactggaggagccgtccacgcag
caggcgtacagctacccatcagcccccagcgcgcacccgtcgactccacttcccgctgct
cccatcatgccaccaaaggaagaaactccagaagatctggtgaaaaaggatgtggaactg
gaaaaagacccacccacccccttccaagctttgtatccagatattcccccagattattca
ttccagtcactttcggcgtcctttagaagaccttatccataccttctccagccctctgca
cctacagatgctgatgccttggctccagatgtgccactgcccactgagggttccaatcac
ttgcaagtttctccagatgtgaaaccagtgcatttgccctcttcagaaatgatggagccg
ctggtggcttccacagaggaggagctactggaagaagtgaaagctgagaaggaggccgag
atggaccagaatgaggcaggcgtctgtgagcagagcatggaggtccctaacgccaccccc
tccaaatccgtggatagctgtagcattttgttgcgtcagcgcgaagatcaaagcgttgtg
gaggacgagcaggaacgcctccagaaatgttcacccgtttaccatgacgtagcttaccgg
gcagaacctgaaacccaggctgacccagcaaatgggctggatacctgccccacccacatg
gactttgaagtcacattaatggacccagcgaacgaccagcctgtcaagagtctaagttcc
ccactgagcgaagcaccttctcttgcagctgagaggaaagaccccgatactttcttagag
gaagaactcattggcccacctctgaaagagagtgagcccatgttggacagtagtgagtac
attgaaaaggcaaggtcttaccaactccccagtttacgctgtttggacatcaagcccgag
aaccctcttgctggcatgaatgcattagtggctgcaactgagatgccccaggcttgttcc
ttcttgactatgtgtggtaggaggcagcgagaagttgatctggaaatgacctctgacctc
tccttagaccccaccttacttcaagggattgttcttctaagtgaaattgcggagctggac
ctagaaaagagaaagcaagaggttcaacgtcaggaaatttgtcgcgagaggccgactctg
gagagtttgctggccgccagcactcaaatgctgatggaggttctctcgacgcccatcatg
gataacttgaaacaggacgcaattcagctgcctcgagaactgaaccccaataagaaatac
agctggatgcaaaaaaaggatgagcctatttattctaagtcatcgctggagaccatggat
gccatggaactagactacaggatgaggctggcagagctacagaggaggtacaaggagaaa
cagagagagctggtaaagctgcaacagcgtcgggaccctgaggagaaacgtgatgagaaa
agtagaagtttggcaagaagggggccagggaggcccaggaagagaaagcatggatcatgt
gctctgtcgccccctatggagagagggaagagtgacaataagagcagaaagctaagcaaa
tccttgctgctttcagaagactctgagacaggggaagggatgaggaaaagatcaaaaggg
gcatttgccgaggaggatgagatggaaggtgtaagtggaaaaatgaaagggaggaatcga
agctgggatgagcatgaaggaacatcaagttttccaaacgagattcaggaaaggagtagg
aagaaaaagagaaccagtgatcaagagcagttagcaagcaagttggacaaagccttgtcg
ctcaccaaacatgacaagctgaagtctccttttaagttttcagacacatgcggaagcaag
cagaagtgtagagaaggaggcagcaccaaatatttgactccccaagagaccttgctgggc
aaggatgggcagaaaaaaaggaccaaaggcttaagtttgccactgaagatctccaaagaa
ggtaaaaacaaaatggctgccaaaattaagaagatggaggtggggttaaaggtcaagggt
ctgctgaaggcttctcattcaccagccatttcggaaattagcagctactcgtataataca
gactctgaggaagacgatgaatctttaagggaggagtggcctccccagtcgtcatctgtt
tccagactgaggcaatctagtctctacagcatagtggccaaaaagagcagcaagacagcc
ggaggcttcaaaccggccaccaggggaatgccggccgctgggactctgaaatcaaagcag
gccgcgactaggacgcagcagttttgcttgctgctgcgagaagccgaagctggatcttcc
ttcagtgattcctcggaggactcgtttgatcaagattatagctcagaagaggaggaagac
gacgatgagtttgaggaggaccctgacgagtgtatgatgaacggcagtgacaggctttcg
ggcccggccttggatgagagtgggctggggcttttagccaggtatgctgccagtgctctc
ccgagtcccgtcatctcctcgccgctatcggtcatccagctggaggcaaagcagaaggcc
aagaaaaaggaggaacgtcagaacctgatggaatatacggattcggagagtgagatcaag
atcaggaaaaaatcgccagtggggttcctgcgaacaaagaaagttccttttgagcttggg
aactgctctcctgtttcatcaggtgttgacacctccgtagggagctcagataaagccaag
atcgagaaggggcggaaactgaagaaacttaaatccccaaaggatctgacctttgaattt
gggcaagaggcaagtgacgatgatttgtggactcggcgtcggagcgaacgcatcttcctt
catgactccagtacatgtaatgtgctctcgccaactactcctacaagctccacaccagtt
tccaagcctggtcgttgtggcactgggaaaggagcacctctgagtcccaaaaaagaaggg
agtaaagggaaggatcggaaggaactcactaagcagaggaagaagggaaaagaaggtcct
tgcttgcaatcctcctcctcttccacatccatctcttcacccggcatctcagatttgacc
accgaggtccgagtcagcctggcaagtccagtcagctccaacaggaagaacaaagcgaag
gtgaaaaccaaggagctgaaaaaagagagccgtggtaaaggaggagctgtaagcaaattg
atggaaagtatggcagctgaagaagattttgaacccaaccaggacagcagcttctcagag
gatgagaatgtgacactgagtgtgctcattgagcgtccccctaccccagctccctgctct
tgcatcatcgataaggaggaactcaaggacgggttgcgtgtgctcataccgatggatgac
aagctactctacgctggccatgtacaaactgtccactcccctgacatctacagagtggta
gttgaaggcgagagagggaaccggcctcatatttactgcctggagcaactcttacaagaa
gcgatcatagacgtgaagccgccatcaatgcgatttctaccagaaggaaccaggattgct
gcctactggagtcagcaataccgctgtttgtacccaggcaccgtggtcagaggttccctg
gatcaagaagatgacggggatctggtgacggtggagtttgatgacggggacactggccgc
atccccctgtcccacattcgacttctgccgcccgattacaaaatacaatgtgcagaaccc
tcccccgcccttctggttcccagtgctaaacgccgcagtcggaagtccagtaaggacacc
gtagaaggaaaagagattggactgttggggtcagaagagccagtggtgaagagcaaaggc
cgtggaagaaaaccgagtatcaaatcccaaactggtgaggtcaccctaacagaagtaatt
gatcaggaagacgcttcaagttctgcttctgttcaagagaaaccaacctgtcttggccaa
caaagcatgaaagcagcaagaaaaaaccaacagatctcatcaggagcatctcctactcgg
aaggaggaaaaacaaaagagctctaataagatgaagatcaaaaaattgcatactcaacag
caagcatcttatgcaccagtattcagtaacataactggcacagaaccatttggagagcag
ttgacgacaccaggttcattcagtcccactgacaacccaaatgggaaaagtaaaacaaaa
aaaggaaggaaagctgaagaaacacaagactttggacaaactactaaaggacagagaaag
cagctggacaatgaaatcctgattaagttagaccatgaaggtgtaatgtctccaaagacc
aaaaaagctaaagaggctatgatgatgaaagaagattcaagcagaactgtaaggagagag
cggaagaatgtgctcggtatgggctactcaccactggtgaacagtgaagtcaagcagaag
acctcaaaatctaagtcaccggttgaaggtgatgatcctttaccttcaaattatggaggt
ggtaaatttgatagctctgaagataagccagccaaggtcgaagatcagaagaaaaaagca
caagaagaactggatagtaacagcagtggaagcagctctgagtctgagggagaagaagga
gtgaacaatggcagtcaggctcaggaagacactagttcaaccagctcaagagcttcaaca
cccatgtcttcatctaattcttcttcttcctctagcagtagtagctcagtctcttcctcc
tcatcttcctcctcctcctcctcctcaacttcatcttcttcaagttcaagctcttcttcc
tccacaacagatgaagattcatcatgcagttcagatgatgaagcagccgatacccaacct
agttcatctgtccagcaaccacttcctcaaaaacagaccaagcagacaaacaaatctcga
acttcatctcatgctcaaaatcagaaacagcaacagcagaaacagcagcagagcagcaac
aagagcaagcctaagaaaagggaagggatccatctacctaccaccaaggagctagcaaag
cgacagaggttaccctctgtggaaaatagacccaaaattgctgctttcctaccagcgaga
caactttggaaatggtttggcaaacctactcagagaagaggaatgaagggaaaagcccgg
aagttgttctacaaagccattgtccgtggaaaggagatcatccgtatcggggactgcgca
gtcttcttatctgccggacggcccaatttgccctacattggtcgcatccagagcatgtgg
gagtcctggggcaacaacatggtggtcagggtgaaatggttctatcatccagaagaaacc
aacccgggcaagaaactcaacgaaggcaagcactgggatctgaagtctagccgaaaccta
cccgctgctctgcaagcgtccagtcaaaggaaagacttcatggagcgggcactctaccag
tcttcccatgtggatgaaaatgatgttcaaacagtttcccataaatgtttggttgtggga
cttgaccagtacgaacagatgctgaagacaaagaaataccaagacagtgaggacttgtac
tatctggtgggaacctacgaacccattacgggcatgatctacaacaccgatggtgtgcct
atcctctgctga
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integrated database retrieval system
