Geotrypetes seraphini (Gaboon caecilian): 117346009
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Entry
117346009 CDS
T09159
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117346009 (SEC16B)
Membrane trafficking [BR:
gsh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117346009 (SEC16B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
117346009
NCBI-ProteinID:
XP_033771094
UniProt:
A0A6P8N6F9
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All DBs
Position
12:85612616..85785381
Genome browser
AA seq
1102 aa
AA seq
DB search
MEENEPRVNLGSQIRIGMDPGALLPHSQPQGRYIARTEILDKGPWRDGYHHRSTPLPRPN
SEMYFQPLDPRCGPQPWLNSWTGSYHHHPNLSFRTSNQSKQESWTEYYEGCYPHRPYSRQ
GYEEAYQTYPAQGSLREDYYRGYYHRYPRTAQEDIDWRQTGSYDSQTAVYRDQSYYSTYQ
QEPEHGSFQQRNGAYYKAEHYDESYIWDSRQKRDGEELQRNLPEESGPQQDELSTANEPS
LLLQYRDSGLSSSSYELSQYMVDSSDQYDRAHSRSWSSVQAEEDLSSTPYTVEPLKYSLP
HVTVCFGAGGQLVRVCPNFPAEGQPALIEIHSLEVLLHDTAEQEEMRAFPGPLAREDLHK
LDVMTYCQRKIALIGQMDSRRNHDLALLWQLLILLCRQNGTMVGSDIAELLMHNSRRVKY
TKQETISNLINLTDEAWLLPGSGTPDLLTGEIPCSTETAATAVEKFTKLLFFGRKKEALE
LAMKSQLWGHALFLSSKMDLRTYSEVMSRFTNTLAINDPIQTLFQLMAGRIPRAATCCGD
LRWEDWRPHLAVILTNQVEDVELQQRTLVAMGDCLAGKGLIEAAHFCYLMANVTFGYYSI
RKHPLVLLGSSCSQTFPKFTSTESIQQTEIFEYCQLLRHSKSFIPSFQVYKLLYASRLAD
YGLPSLALHYCEVIGSAFLDQNGTKHLVVLTELIKLAERLKLSDPRLLERPDQEETQDPD
WLIQLRVRLQQLQVEGEHDSPTSASVDTACASRPAADLQALSQSSDSLEDSRREIQTWGN
QEKLGYPQDNHFMAQGMGLYQTGTTQHPSYHPGTYHMGEVPQEIPVSVDRISDTLQPGFS
EATESPWSPENEQHCGPPGPGNFAVMAQPQEQHKEFGDGKETPVQQAQHVPVARIRSISE
SSAISVEDEHSGDSSERDTEDTQESLQGPETKEAASKTGSGYGWFGWFRSKPVNTAGLSK
KSSSTGPSVSDSSLPDQQEMTAALPPPPLPPPVSTSPSSHYLPPPLHLFTYLTLVSILSL
GTAGTKETKDSTIRRVSVSGKGEHQEGTSNPSPAFTPLPLEGTVPLFNPQELSTARSNTL
NQPRRLSQRRYPTQPPRTNNLI
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacgagcccagggtgaaccttggtagccagattaggatcgggatggatcct
ggggcacttctccctcattcccagcctcaagggagatatatagccaggacagaaatcctg
gacaagggcccttggagggatgggtaccaccacaggtccacaccacttcctaggcctaat
agtgaaatgtattttcagccgctggatcctagatgtgggccacaaccatggttgaactct
tggacagggtcctaccatcaccatccaaatctctccttcagaacaagtaatcagagcaag
caggagtcttggactgagtattatgaagggtgctatccccacaggccatattcgaggcag
ggctatgaggaggcctatcagacctatccggcccaaggttcactgagggaagactattat
agagggtattaccacagatatcccaggacagcacaggaggatatagactggagacaaact
ggctcatatgacagtcagacagcggtgtatcgggatcagagctattacagcacataccag
caggagcctgagcatgggtcttttcagcagaggaacggggcctactacaaggctgagcat
tatgatgagagttacatctgggattccaggcagaagagggatggagaggaactgcagagg
aatttgccagaagagtctggtcctcagcaagatgagctttccactgccaatgaaccaagt
ctgctcttgcagtatcgggactctggtctctcatccagcagctatgagctaagccagtac
atggtggactcctctgaccagtatgaccgagcacactcaaggagctggagttcagtccaa
gcagaggaagacttgtcgtctacaccttatacagtggaacccctgaagtactccctgcct
catgtcactgtgtgctttggagctggaggacagttggtccgtgtgtgtcccaacttccca
gctgaagggcagccagcactcattgaaatacacagcctggaggtccttctccatgataca
gctgaacaggaggagatgcgagcctttcctgggcctctggccagagaagatttgcacaaa
ttggatgtgatgacatactgtcaacgcaaaattgctctaatcggccagatggacagtaga
agaaatcacgatttggctctgctctggcagcttctgatcctcctttgcaggcagaacggg
actatggttggttctgatattgctgagctcctcatgcataacagtcggcgggtgaaatac
acaaagcaggaaaccatttccaatctcatcaacttgacggacgaggcctggctgctgcct
ggttctggcactcctgacctcctgacaggcgagattccctgcagcactgagacagcagcc
acagctgtagaaaagttcaccaagctccttttctttggcagaaagaaagaagccctggaa
ttggcaatgaaaagccagctctggggtcatgccctgtttctgtctagcaagatggatctg
aggacttacagtgaggttatgagcaggttcaccaacactttggccatcaatgaccccata
cagacattgttccagctcatggcaggccgcatcccccgagcagctacgtgttgcggggat
ctgaggtgggaagactggagaccgcacttggcagtgattttgaccaatcaggtcgaagat
gttgagctacagcagcggacccttgttgctatgggtgactgtcttgctgggaaaggatta
atagaagctgctcatttctgttatttgatggccaatgtcacttttggttactacagtatt
agaaagcatccccttgtccttctgggcagtagctgcagtcaaacatttccgaagttcacc
tcaactgagtctattcagcagactgaaatctttgaatactgtcaactcctgaggcactcc
aagtccttcattccttctttccaggtgtataagttgctgtatgcctctcgcttagcagac
tatggactcccctctttggctctccattattgtgaagtgatcggctctgccttccttgat
cagaacggtactaaacatcttgtggttctcacagaactcatcaagctagccgagcgactg
aagctttcggatccacgcctattggaaagaccagatcaggaggagacccaggatcctgat
tggttgatacagctccgagttagattgcaacagttacaggtggaaggagagcatgacagc
ccaacatctgcctctgtagatactgcatgtgccagcagaccagcagcagatcttcaagca
ttatcacaaagttctgatagtctggaagattcacggagggagatacagacttggggaaat
caagagaaacttggatacccacaggataaccattttatggctcagggcatgggcctatat
caaactggcactactcagcacccctcctaccaccctggcacttatcacatgggagaagta
ccacaggaaattccagtgtcagttgataggatcagtgataccttgcaaccagggttcagc
gaggcaacagaatcaccatggagtccagagaatgaacaacactgtggaccaccagggcca
gggaattttgcagtgatggcacagccccaggaacagcataaggaatttggggatggcaag
gaaactccagtacagcaggcccagcatgtgccagttgcaaggatcagatccatttctgag
agttccgccatctctgtcgaggatgaacactcaggagatagcagtgagagagacactgaa
gatacccaagagagtttgcaggggccggagacaaaagaagcagcgagtaaaacgggctca
gggtatggctggtttggttggtttcgatcgaagcctgtaaataccgctgggctgtccaag
aaaagtagcagcactggcccctctgtctcagactcttctctgccagatcagcaggaaatg
acggcagcactacctccacctcctctgcctcctccagtttcaacaagcccttcatctcat
taccttcctcctcccctccatctcttcacctacctcacactggtatcaatcctttctcta
ggaacggcaggaacaaaggagacaaaggacagcaccatcagaagagtatcagtatcggga
aaaggcgagcatcaggagggcacatctaatccttcacctgccttcacacctttgcctctg
gaagggactgtaccattatttaatccccaagagctttccactgccaggagtaataccctg
aaccagcccaggaggctttctcagcgacgttacccaacacagccaccaagaacaaacaat
ttaatctag
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integrated database retrieval system
