Geotrypetes seraphini (Gaboon caecilian): 117346086
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Entry
117346086 CDS
T09159
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117346086 (LAMC1)
04518 Integrin signaling
117346086 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117346086 (LAMC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117346086
NCBI-ProteinID:
XP_033771305
UniProt:
A0A6P8NQR7
LinkDB
All DBs
Position
12:82635431..82979918
Genome browser
AA seq
1624 aa
AA seq
DB search
MFPLFQTSSFLRFSQHLRSRPPNMNLCGRVRLLLWTGFLELLLLSGGASAAMDECTDEHG
RAQRCMPEFINAAFNMTVVASNTCGSPPEEYCVQTGVTGVTKSCHQCDASQLHLQHGAAY
LTDYNKQMDPTWWQSQTMLAGIQYPRSVNLTLHLGKSFDITYVRLKFHTSRPESFAIFKR
TQEDGPWVPYQYYSGSCANTYHKPNRGLIITGDDEQQAVCTDEFSDISPLTGGNVAFSTL
EGRPSAYNFDNSPILQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAVADFSVGGR
CKCNGHASECLRNDHHKLVCNCKHNTYGVDCEKCLPFYNDRPWRRATAESASECLPCNCN
GRSQECYFDPELYRSTGHGGHCTGCSDDTDGANCERCRENFYRLGSEERCQFCNCNSVGS
LSTQCDNYGRCSCKPGVMGEKCDRCKPGFHSLTEAGCRPCSCNPAGSTDECNSDTGRCIC
KDNVEGFNCERCKPGFFNLDPTNPRGCTPCFCFGHSSVCTNAEGYSIYTISSTFQTDEEG
WRAEQRDGREILLRWSSENRDISIISDSYFPIYFFAPDKFLGNQVLSYGQNLSFSFRVDR
RDTRLSAEDLVLEGAGLRVSVPLIAQGNSYPSENTLKYVFRLHEATDYPWRPALSPFEFQ
KLLHNLTAIKIRGTYSEKSAGYLDDVTIMSARAGHGRPATWVESCTCPAGYLGQFCEHCA
PGYRRETPSLGPYSPCVVCTCNGHSNTCDPESGACDCRDNTAGLHCERCSDGYYGDSTAG
TPNDCQPCPCPGGSSCAVVPKTKEVVCTNCPVGTTGKRCELCDDGFFGDPLGESGPVRSC
RPCHCNDNIDPNAVGNCDRLTGECLKCIHNTSGFYCDRCKDGFFGNALATNPADKCKPCS
CNPYGTVNRQTSCNQVTGQCECLPHVSERDCGACEPGFYNLQSGRGCERCDCHALGSTSG
QCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCDPEGSSSLQCKDDGRCVCKE
GFVGHRCDQCEENYFYNRSWPGCQECPACYRLVKDKVHDLRGRLRELETLIANLGTGDEV
VTDEAFENRLKEAERAVKELLQEAQNSKDVDQGLMDHLNEINNTLSSQLGRLGNIQKTVA
ETEGLAQQARDQVENTENLIEIARGELEKAKVAIANVSITQPISPGDPSNMTLLAEEARR
LAERHKQEAQDIERIAKEANTTSSEALKLLLKTLADENRTAAEIDELNRKYNQAKNISRD
LEKQATKVHAEAEEAGSKALQIYANITSLPTVDTKLLENEANKIKKEAEDLDQQINRKLK
DYEDLRDDMRGKELEVKNLLDKGKTEQQTADQLLARADAAKALAEEAAKMGRATLQEAND
ILNNLRDFDKRVNDNKTAADEALRKIPAITQTILDANNKTRQAEQALGNAAADGREAKNK
AEEAEKIANAVQKNATQTKSDADQAFSDAMGLDTEVDDMLKQLQDAEKELKKKQAEADQD
MMMAGMASQAAQEAEDQARKAKNSVNGILNIINDLLGQLGRLDPVDLNKLTEIEDTLNAA
KTQMKESDLDGKVAKLEKEAKLQNDSILAYQKDINDIIKDISNLEDIKKTLPVGCFNTPS
IEKP
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgttgttccaaacttcatcttttcttcgctttagccagcatctccgaagccgc
ccgccaaacatgaacttatgcggcagggtgcggctgttgctgtggactggcttcttggaa
cttttactcctgtctggcggcgcgtcggccgccatggatgaatgcacggacgagcatggg
cgagcccagcgctgcatgcctgaattcatcaacgctgcctttaatatgaccgtagtagct
agcaacacgtgcggctctcctccagaggagtactgcgtccagacgggagtcacgggggtg
accaaatcctgtcaccagtgcgatgccagccaacttcacttgcagcatggagccgcttac
ctgaccgactacaacaaacagatggaccccacctggtggcagagtcagaccatgctagcg
ggcatccagtatccgagatctgtcaacctgacccttcacttaggtaaatcctttgacatc
acgtatgtacgtctcaagttccacacaagccggccggaaagctttgccatctttaagcga
acgcaggaggatgggccctgggtgccctaccagtactacagcggctcctgcgcaaacaca
taccataaaccaaaccgtggcttgattatcactggggatgatgaacagcaggcagtgtgc
acagatgagtttagcgacatctcaccactgactggtggcaatgtagccttttctacgctc
gagggaaggcctagtgcctacaactttgataacagccctattctacaggaatgggtgaca
gctactgacatccgagtgactctgaacagattgaacacctttggggatgaagtatttaat
gaccctaaagtcctaaagtcctattattatgcagtcgctgacttttctgtaggtggcagg
tgtaaatgtaatggccatgccagcgaatgtttgaggaacgatcatcataaactggtgtgt
aactgcaagcacaacacctatggggtagattgtgagaagtgcctccccttctacaatgac
aggccatggagacgagcaacagcagagagtgccagcgagtgtttgccctgcaactgtaat
ggccggtcccaggaatgttactttgaccctgagctgtaccggtccacgggtcatggaggt
cactgcactggttgttcagatgataccgatggagccaactgtgagaggtgccgagagaac
ttctaccgcctggggagcgaggagcgctgccagttctgcaactgtaattctgttggctcc
ctcagcactcaatgtgataattatgggcgctgcagctgtaaaccaggtgtgatgggtgaa
aaatgtgaccgatgcaaacctggattccattctttgacagaggctgggtgcaggccctgc
tcctgtaaccctgccggcagtacagacgaatgcaacagtgacactgggcgctgcatctgt
aaggacaatgtggaaggatttaactgtgagaggtgcaaacctgggttctttaatctggat
ccaacaaatccccgtggctgtacaccctgcttctgcttcggtcattcttctgtgtgcacc
aatgctgagggttacagcatatataccatctcttccaccttccagacagatgaggaagga
tggcgtgctgaacagcgcgatggcagagagattttattgcgttggtcctctgaaaacagg
gacatctccattatctcagacagttatttccctatctacttctttgctccagacaagttc
ctgggcaatcaagttttgagttatgggcagaatttaagcttcagtttccgagtggacagg
agagacacacgactctcagcagaggacttagtcctggaaggagccggcctgagggtatcg
gtacccctcattgcacaaggaaattcctaccccagtgagaatactctgaaatatgtcttc
aggcttcatgaggcaacggattatccatggaggcctgcactcagcccatttgaattccag
aagcttttgcacaatctgaccgctatcaagattcgtggaacatacagtgaaaaaagcgca
ggctatctggatgatgtcactatcatgagtgctcgtgcaggtcatggaagacctgccacc
tgggtggagagctgtacctgcccagctggttacctgggacagttctgtgagcactgtgct
cctgggtacaggagagagactcccagcctgggaccctacagtccatgtgtggtgtgcact
tgcaatggacacagcaatacttgtgacccagaaagcggtgcttgtgactgcagggacaac
acagcaggtctccactgtgagaggtgcagtgatgggtattatggagattcaactgcaggc
acgcccaatgactgccagccgtgcccatgccccggaggctccagttgtgccgttgtgcca
aagacaaaggaggtggtgtgcacaaactgtcctgttggtaccactggcaaaagatgcgag
ctctgtgatgatggattttttggggaccctctgggtgaaagtggtcctgttcggtcttgc
cgaccctgccactgtaatgacaacatcgatcccaatgcagttgggaattgtgaccgtttg
acgggcgagtgtctgaagtgcatccacaacaccagcggcttctactgtgatcgctgcaaa
gatggcttctttggaaatgcattagccaccaaccctgcagacaaatgcaaaccttgcagt
tgtaatccttatggtactgttaaccggcagaccagctgcaaccaggtgactggtcagtgt
gagtgcctcccccatgtttcagaaagagactgtggggcttgtgagcctggattctacaac
ctgcaaagtgggcgtggctgtgagagatgtgattgccatgccctgggatccaccagtggt
cagtgtgatatccggacagggcagtgtgagtgccagcctggcattactggccagcactgt
gaacgctgtgaagtcaaccactttggctttggtccagaaggctgcaaaccctgcgactgt
gaccctgaaggttccagctctctacagtgcaaagatgatggccgttgcgtgtgtaaggaa
ggttttgtggggcatcgttgtgatcagtgtgaggagaactatttctacaatcgatcttgg
cctggctgccaggaatgtcctgcttgctacagactagtaaaggacaaggttcatgacctg
cgagggaggttgcgggagctggaaacacttatagcaaatttggggacaggggatgaagtg
gtgacagatgaggcctttgaaaacaggttgaaagaagcagagagggccgtcaaggagcta
ttgcaagaagcccagaacagcaaagatgttgatcaaggcctgatggatcatctcaatgaa
attaacaatactctgtcaagccaattgggccgtctggggaatatccagaaaactgtggca
gaaacagagggtttagcacaacaggctcgtgaccaggtggagaacacagagaatctgatt
gagattgcacgtggcgagttagagaaggcaaaagtggccattgccaatgtgtctatcacc
cagccgatatcccctggtgaccccagtaacatgacattgctggcagaagaggcacggaga
cttgcagaacgacacaaacaggaagcacaggacatagaacgtatagccaaggaagccaat
accacgtccagtgaggctctcaagctcctgctaaaaacactggcagatgagaaccggaca
gctgctgagatcgatgagctgaatagaaagtacaaccaagcgaaaaatatctcacgagat
ctggagaagcaagctaccaaggtgcatgctgaggctgaagaggctgggagcaaagctctg
cagatctatgccaacatcaccagtctacccactgtggacaccaagttgctagagaatgag
gcaaataagataaagaaggaggctgaggatctggatcagcagatcaacaggaaactgaag
gattatgaggacctaagagatgacatgagaggcaaagagctagaagtgaagaatctctta
gacaaaggaaagacagaacagcagactgctgatcagctgttggccagagcagatgcagcc
aaggctcttgcagaagaagcagccaagatgggaagagccaccttgcaagaggccaatgac
atcttgaacaacctaagagattttgacaagcgagtgaatgacaacaaaacagcagcagat
gaggctttgagaaaaatccccgccattactcagaccattttagatgccaataacaagaca
cggcaggcggagcaagcactgggcaatgctgccgccgatggcagagaggccaagaacaag
gctgaggaagcagagaagattgccaatgctgttcaaaagaatgctactcagaccaagtca
gatgccgaccaagccttttccgatgccatgggcctggacacagaggtagatgacatgctg
aaacagctgcaggatgcagagaaggagttaaagaagaagcaagctgaggctgatcaggac
atgatgatggcaggaatggcttcacaggcagctcaagaagcagaagaccaagctagaaaa
gctaagaactctgtgaacggtatattgaacatcattaatgatctcctgggacaattaggt
cggctggacccagtggacctgaataaactgactgagattgaggacaccctaaatgctgcc
aaaacccaaatgaaggagagcgacctggatgggaaagttgcaaagctggagaaagaagct
aagctgcaaaatgactctatactggcataccaaaaagacattaatgacatcatcaaggac
atcagtaatctggaagatatcaagaaaacgttaccagttggctgctttaacacccctagc
atagaaaaaccctaa
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