Geotrypetes seraphini (Gaboon caecilian): 117346104
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Entry
117346104 CDS
T09159
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117346104 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117346104 (RPAP2)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117346104 (RPAP2)
Protein phosphatases and associated proteins [BR:
gsh01009
]
HAD phosphatases
Fcp/Scp phosphatases
117346104 (RPAP2)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117346104 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
NleF_casp_inhib
Hep_59
Motif
Other DBs
NCBI-GeneID:
117346104
NCBI-ProteinID:
XP_033771361
UniProt:
A0A6P8P787
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Position
12:complement(23444456..23554052)
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AA seq
584 aa
AA seq
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MPGRSADKRTRPVKTYGNKHTNPLKHEDAQNRRAALELAVGKKIELEKRALQIVERLMED
DVTEDFLLGCGRFITLADYKDTVDERFIIKLCGYPLCRNKLEKVPKQKYKISTKTNKVYD
ITERKCFCSNFCYRASKYFESQIPQSPLWMREEERPADFKLLKPGQSGHSGEEVKLYDKS
ILLSDIENPRVSASHRKSNFSSESDKDSDSEQEFVSAVLTEKRSRAQSLKPQPPKTSLPS
EKYTPETKAINKEQEHMMLEIAEELSKCKVDDKDKTNTTTVSFQTKELCAPGTDLTPDKL
QTSEESECNPSGSQITSRGVSKRGAEHLRRMLARTKQPLKSDSEVPLPPPTIKGNMLEAL
IKTFSEWKTDETMEFLYGPQSTSRSEKEELDTDDLPLETVGLCDSEDHSSQKSHSSLNES
VSAKALPNFERLKGETAMLNLTAKEFYKGVYKDRDVKQDDPVLPLVDSSAQHQIRKRIVL
DRLKKVLPVILVPLQITYSEVYAELHNLIKTFRLTNKNIYHKNTEWSLIAIVLLSILSPK
ISHKDAQKSPLYTQFISTFLEELHFQNEDLETLINIFASNSAVE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtcggagcgctgacaagaggacacgtccagtaaagacctacggaaataaacac
accaaccctttgaaacatgaagatgcacaaaacaggagagcagcactggaattggccgtt
gggaaaaagatagaacttgaaaaaagagctttacaaattgttgagcgactcatggaagat
gatgtcaccgaagacttcttgctgggttgtgggagatttattacacttgcagactacaag
gacacagtagatgaacgatttatcatcaaactttgtggctatcctttatgtcgaaataaa
ctggaaaaggtgccaaagcaaaagtacaaaatttcaactaaaacgaacaaggtttatgat
ataacagaaaggaagtgtttttgcagtaatttttgctacagagcctccaaatattttgaa
tcccagattccccagagtcctctttggatgcgagaagaggaaagacctgctgatttcaaa
cttttgaagccaggacaaagcggtcattcaggcgaggaagtcaagctatatgacaaatcc
attctgctgtcagatatagaaaaccctagagtgtcagccagtcatcgtaagtccaacttt
tcctcagagagtgataaggacagtgattctgaacaagaatttgtttctgctgtgctcaca
gaaaagagatctagggcacagagtctgaagccacagccacctaaaactagtctgccaagt
gaaaaatatactccagaaaccaaagccataaacaaagaacaagaacatatgatgcttgaa
atcgcagaagaactgagtaaatgcaaagtggacgacaaagacaaaacgaacactactacc
gttagtttccaaacaaaagaactttgtgcacctggaacggatctaacgccagataaactg
cagacttcagaagaatctgagtgcaacccttctggttcacaaataacttcgagaggtgta
agcaaaaggggtgctgagcatctcaggagaatgcttgccaggacaaagcagccccttaaa
tcagatagtgaggtacctctccctcctcctactattaaaggaaacatgctggaagcactt
ataaaaactttcagcgaatggaaaactgacgaaacgatggagtttctctatgggcctcag
agcacctccaggtccgaaaaagaagagcttgacacggatgacctacctctagaaactgtg
ggcctctgtgactctgaggaccatagcagtcagaaatctcacagcagtctgaatgaatct
gtgtcggctaaagcactgcctaattttgaaagactaaaaggagaaacagcaatgttgaac
ctgactgccaaggagttttataaaggagtatataaagacagagatgtcaagcaagatgat
cctgtccttccactggtagattcttctgctcaacaccaaattcggaagcgtattgtactt
gatagactaaaaaaagttttgcctgtgattttggttcctcttcagataacatacagtgaa
gtttacgcagaattgcataatcttatcaagactttcagacttacaaacaagaacatttac
cacaaaaatacagaatggtccttgattgccatcgtactgttatccatattgtcccccaag
atttcacataaggatgcacagaagagccccttgtatacccagttcatttctacattcctt
gaagaattgcatttccaaaatgaagaccttgaaactttaataaacatctttgcaagcaac
agtgcagttgaatga
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