Geotrypetes seraphini (Gaboon caecilian): 117346414
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Entry
117346414 CDS
T09159
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117346414 (PTBP2)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117346414 (PTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
117346414
NCBI-ProteinID:
XP_033771827
UniProt:
A0A6P8N8D2
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Position
12:complement(18968690..19200989)
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AA seq
634 aa
AA seq
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MDFFVERCPGGEPEERALAGGASLMVNSGTSFEAVSFSPEERSTPVQPRPCSSLSATGEA
SEAADSEDSEEGEDQDVQNVLTAGGIQRPQREIASLIGDQQSQSPEQQISANGNDNKKFK
GDDKMDGAPSRVLHIRKLPNEVTETEVIALGLPFGKVTNILMLKGKNQAFLELASEEAAI
TMVNYYTTMTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTSNSSLSGTAV
SESMATAAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDP
VNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPSLDP
AIAAAFAKETSLLVCSQECAEYPNIQHTIPDYWKRYCQGLPVAAVPGALSPLGIPNAAAA
AAAAAAGRVGIPGVSSGGNTVLLVSNLNEEMVSPQSLFTLFGVYGDVQRVKILYNKKDSA
LIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHR
FKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLRALFANTGGTVKAFKFFQRDHKMALLQ
MSTVEEATQALIDLHNYNLGDNHHLRVSFSKSTI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggattttttcgtcgagcgatgcccgggcggagagccggaggagagagccttggctgga
ggcgcgagtttgatggtgaactcggggacctcctttgaggcagtcagcttctccccggag
gagcgcagcacaccagtgcagccacgcccatgttcgtcgctgagtgcgacgggagaggca
agtgaagcggcagattcggaggacagtgaagagggggaagatcaggatgtccagaatgtc
ctgaccgccggaggaatacaacggccacagcgtgagattgcaagcttgataggagatcag
cagagtcaatctccagaacagcaaatttcagccaatggtaatgacaacaagaagttcaaa
ggagatgacaaaatggatggtgctccatctcgtgtccttcatatccgaaaattacctaat
gaagtgacagaaacagaagttattgctttaggtttaccttttggtaaggtaactaacatc
ctcatgctgaaaggaaaaaaccaggcttttttggagttagcttctgaagaagctgctatt
accatggttaattattatactactatgacacctcatcttcgtaaccaacccatctatatc
cagtactctaatcataaggaattaaagactgataacacattaaaccagcgggcgcaagca
gtacttcaggctgtaacagcagtacaaacatcaaattcttctctaagtgggactgcagtg
agtgagagtatggcaacagcagctcagagtcctgttctcagaataattattgacaacatg
tactatcctgtaactcttgatgtccttcaccaaatattctctaaatttggagctgtcctg
aagatcatcacatttacaaaaaataatcagtttcaagctctattgcagtatggtgatcca
gtgaatgcacagcaagcaaaattagccttagatggtcaaaatatctataatgcatgctgt
accttacggattgatttttcaaaactggtgaatttgaatgtgaaatacaacaacgataaa
agtagagattatactcgtccagatctcccatctggagatggccagccatcattagatcct
gccattgctgcagcatttgccaaggagacatcacttttagtatgctcacaagaatgtgca
gagtaccctaacattcagcataccattcctgactactggaaaagatattgtcaagggctt
cctgttgcagctgttccaggagctctcagtcctctgggtattccaaatgctgctgcagca
gcagctgcagctgccgcaggccgtgtgggtatacctggagtttcatctggtggcaatact
gtcctccttgttagcaatttaaatgaagagatggtttcgccccaaagtctgtttaccctc
ttcggtgtttatggggatgtgcagcgtgtgaagattttatacaataagaaagacagtgct
cttatacagatggctgacggaaaccagtcacagcttgcaatgagtcatcttaatgggcaa
aaaatgtatggaaaaattattcgtgttaccctatccaaacatcagacagtacagctacct
cgggagggacttgatgaccaagggttaacaaaggattttggtaattcacctctccatcgc
ttcaagaaaccaggctcaaaaaattttcagaacatattccctccatcagccactctccat
ctgtctaatattccaccctcagtatcagaagatgatctgcgtgcactttttgctaatact
ggaggcactgtgaaagcatttaaattttttcaaagagatcacaaaatggcccttcttcag
atgtcaacagttgaagaagctacccaggccttaatcgatctgcataattacaacctcgga
gacaaccatcatctgagagtatctttctccaagtcaactatttga
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