Geotrypetes seraphini (Gaboon caecilian): 117346431
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Entry
117346431 CDS
T09159
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117346431 (TRMT13)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
117346431 (TRMT13)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117346431 (TRMT13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
TF_AP-2
Motif
Other DBs
NCBI-GeneID:
117346431
NCBI-ProteinID:
XP_033771862
UniProt:
A0A6P8N8G1
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Position
12:complement(14879771..14906123)
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AA seq
468 aa
AA seq
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MEGVGASAPYPGRCGFFVQRKKRFCKMIVGEGKSLCGEHANTAPDNDDENNRRRIPCPLD
PKHTVYEDQLEKHLKKCNSREKPKPVFYVQDINAGLKDTVQTEEKQVSLSSLSEEEIMNL
IRKLRKASSGFAKTLEKRTLSHPVLHEALHDPKNGESAFKHLKQQASILGNLDKLGLLKP
KRCYVEFGAGRGKLSHWVAKALQDSASTHFLLVERATTRFKVDGKHTNRDSVFERLRIDI
QHLCLNRVPILMKEKLPVVGIGKHLCGAATDLALRCLVETYGSQDEEPLPKRLKTEEIET
TKNDDEDKGKTMPEGWFPVTGIVIALCCHHKCDWKHYVGQEFFCTLGLGAEDFNLYQRMS
SWATCGMQKPGTEAPSTWNSELNYYTAEEHHIEYEHMEGLSDQMQGKLSAQEREMIGRLC
KLLIDHGRLWYLRQKGYSAALCYYTDTQVSLENVLLTAVPAQLSLPQP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtcggagcttcggctccgtacccggggcgatgcggttttttcgtgcaacgg
aagaagaggttttgcaaaatgattgtgggagaagggaaaagcctgtgcggggagcatgcg
aacacggccccggataatgatgatgaaaacaacagaagaaggattccatgtccattagat
ccaaaacatactgtgtatgaagatcaactagaaaaacatctgaaaaaatgtaattccaga
gagaagccaaaaccggtattctatgttcaagatattaatgcaggtttaaaagatacagta
caaacagaggaaaaacaagtatctctttcttctctttctgaggaagaaataatgaacttg
attagaaagctaaggaaagcgagcagtggatttgctaagactttagagaagaggacactc
tcacacccagtactacatgaagctttacatgacccaaagaatggagagtctgctttcaag
cacttgaagcagcaggcttctattttaggtaacctggataaattaggtttactgaagcca
aagagatgttatgttgaatttggagctggacgagggaaactctctcactgggttgcaaaa
gccttacaagattctgccagtactcacttcctgcttgtagaaagggcaacaacaagattc
aaggtagatggtaaacacacaaacagagactctgtgtttgaaagactacggattgatatc
cagcacttatgtttaaaccgagtccccatactcatgaaagaaaagctgccagtggtagga
attggaaaacatttatgtggtgctgcaacagatcttgcacttaggtgtttggttgaaact
tatggatcccaagacgaagagccattaccaaagcggctaaagacagaagaaatagaaaca
accaagaatgatgatgaggataagggaaagactatgccagagggctggtttcctgtcact
ggcattgtaattgcattgtgttgccatcataagtgtgactggaaacattatgtagggcaa
gaatttttttgcacgcttgggcttggggcagaagacttcaatctttatcagcgaatgtcc
agttgggccacctgtgggatgcaaaaaccaggaactgaagcacccagcacctggaattct
gaactcaactactacacggctgaagaacatcatatcgaatatgagcatatggagggcctg
tctgatcagatgcaagggaaactttcagcacaagagcgagaaatgataggccgtctctgt
aagttgctgattgatcatgggcggctttggtacctgagacagaaggggtacagtgctgca
ttgtgttattacacggatacccaggtgtccttagaaaatgtactgctgactgccgtcccg
gctcagctctcactacctcagccctga
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