Geotrypetes seraphini (Gaboon caecilian): 117346448
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Entry
117346448 CDS
T09159
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117346448 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117346448 (PRPF38A)
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117346448 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
117346448 (PRPF38A)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
117346448
NCBI-ProteinID:
XP_033771888
UniProt:
A0A6P8RRA7
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Position
12:complement(58717381..58739624)
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGIATDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLETR
ISALEEDMDDVESSEDDDDDDEKMDRVPSPDHHRRSYRDLDRPRRSPSPRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKRSRRANE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcacggtgaaagatgcccacagtatccatggcactaatcctcagtacctg
gtggagaagatcatccgtacgcggatctacgagtcgaaatattggaaggaagaatgcttc
gggctgacggctgaacttgtcgtggacaaagccatggagctgaaatacgttggtggtgtt
tatggaggaaacataaaacctactcctttcctatgcttgaccctgaaaatgctccagatt
caaccagaaaaagatatcattgttgagtttataaagaatgaagatttcaagtatgtcaga
atgttgggggccttatatatgagactaacaggcatagccactgattgctacaaatacctt
gaaccactgtacaatgattatcggaaaataaagagccaaaacaggaatggagaatttgaa
ctgatgcacgtagatgaattcatagacgaactcctgcatagtgagcgtgtttgtgatatc
attttacctcggctgcagaaacgttatgtgctagaagaagctgagcagctggagactcgt
attagcgctttagaagaagatatggatgacgtggagtccagtgaagatgatgatgatgac
gatgaaaagatggacagagtcccatcacctgatcaccacagaagaagttatcgagactta
gacagaccacgcagatctccttcaccacgctatcggaggagtcgaagcagatctccaaga
aggcgaagccgctctccaaagcggaggagcccctcaccacgccgggaacgacatcgcagt
aaaagtccaaggcgccacagaagcagatccagagaaaggcgccaccgatcaagatccaaa
tctccagggcatcatcgaagccacagacacagaagccattctaaatcacctgaaaggtca
aagaaaagtcacaagaggagtcggcgtgctaatgaatag
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