Geotrypetes seraphini (Gaboon caecilian): 117346504
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Entry
117346504 CDS
T09159
Symbol
RNASEL
Name
(RefSeq) 2-5A-dependent ribonuclease
KO
K01165
ribonuclease L
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04621
NOD-like receptor signaling pathway
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117346504 (RNASEL)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117346504 (RNASEL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ribonuc_2-5A
Pkinase
PK_Tyr_Ser-Thr
Kdo
APH
TCAD9
ABC1
ANK_LRRK2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117346504
NCBI-ProteinID:
XP_033772073
UniProt:
A0A6P8NN60
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All DBs
Position
12:complement(81534608..81582018)
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AA seq
693 aa
AA seq
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MSNAEEINNAVKEGDEQKVHLLLEQGTSVNVKGPFGWTPLLTAIQGKQEAIVHFLLEQGA
DPHLRKDNGCSPFILAAIVGNTNLLALFLEKGSDINEMDNNGFTALMEAAIYGHKEILIY
LLEKGADVNLRRVVNKEQKSLGKGGATALMDAAKKGRENIIEILINYKANVNVCDNQGRS
ALLHAFVQPKNTKVSVICTLLNSGAEVNVKDQDGKTPLIHAVKMDQSDLVMCLLEQNGIE
INTIDKAGRTALLEAVENDNYEIAKLLLEKGAKPEYEYVEIAKRNYNQNLVELLRQYGGA
TTGDKISDNWKPYSERWGKKLKRLHETPRNLIGKLKIFIIEEYKIHETSYGGIYLGFYHE
QEVAVKRVPKVPEGDKELICLKQLRKNNHLVCYCGAEEDSSCSYLCLSLYERNLEEHINN
IKDVTKIKDILQSIFLGLHELHERGFCHRDLHPSNILIDLEGKSYLADFSESLKLEDCED
KEELIKNDMKALGNLVLYAVTRGTASFQPDGERDVMEVCPDSVEDFVEARDLINKLISPD
TEYSSVTDFLNHPFFWSHKSRYKFLQDVGNENDVKLRTEKSALFKALNGSDATKTNTFHS
WISTVDKDVLDSMNKHYKKEAYYYKDTVTDLLKFIRNLAAHFEEKSNIKDIIEDPCQYFL
KKFPDLTIYVYETLKHLGMGYDKHFPKPSSSLL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgcggaagaaataaacaatgcagtcaaagaaggcgatgaacagaaagttcac
cttctgctggaacaaggcaccagtgtcaatgtaaagggtccatttggatggactccattg
cttacagctatacaagggaaacaagaagccattgttcattttctgctggagcagggagct
gatccacacctcagaaaagacaatggctgttctccattcatcttagcggcaattgtggga
aatacaaacctcttagcactattccttgaaaaagggtcagatataaatgagatggataac
aatggcttcacggccttaatggaagctgctatatatggccataaagagatcctgatctac
ttgttagagaaaggagctgatgtaaatctgaggagggtggttaacaaagagcagaaatcg
ctgggtaaaggaggggcaacagcgctcatggatgctgccaaaaaaggccgtgagaatatt
atagaaatccttatcaattacaaagctaatgtgaatgtttgtgacaatcaaggaagaagt
gctttacttcatgcatttgttcaacccaagaataccaaggtttctgttatctgtactctg
ctgaattctggtgctgaggtgaatgtgaaggatcaggatgggaaaacccccctcatccat
gcggtcaagatggatcaatctgaccttgtgatgtgcttgttagagcaaaatggaattgaa
atcaacaccatagataaagccggaagaactgcattgttggaagctgtggaaaacgataat
tatgaaatagccaaattattgttggaaaaaggagcaaaacctgaatatgaatatgttgag
atagccaaaagaaattataaccagaacttagttgaattacttcgtcaatatggtggtgca
acaactggagacaaaatttctgacaactggaagccttacagtgagcgctggggaaagaag
ctaaaaagactgcatgagacaccgcgaaacttgattggaaaactgaaaattttcattatt
gaagaatataaaattcatgaaacttcctatggtggcatctacttgggtttctatcatgag
caagaagtagctgtgaagagggttccaaaagttccagaaggtgataaggaactgatctgt
ctgaaacagttgcggaagaataatcatttagtatgttactgtggagctgaagaagatagc
tcatgttcatatctatgtctttctctgtacgagagaaaccttgaagaacacatcaataac
attaaagatgtaactaagatcaaagacattcttcagtctatattcctgggcttgcatgag
ctacatgagagagggttttgccatcgggaccttcatccatccaacattttaattgatctt
gagggtaaatcttacctggcagatttcagcgagagcctgaagctagaagattgtgaagat
aaggaagaattgattaagaatgacatgaaggccttgggaaaccttgtcttatatgcagta
actagaggaacagcctctttccaaccagatggagaaagggatgtgatggaagtttgtcca
gattcagtggaagattttgtagaagcaagggatctcataaataaacttatttctccagat
acagagtattcatctgtgactgatttccttaaccatcccttcttctggagtcacaaaagc
aggtacaagtttcttcaagatgttgggaatgagaatgatgtcaaattgcgtactgagaaa
agtgcccttttcaaagctctgaatggttcagatgctacaaagacaaatactttccactca
tggattagtacggttgataaggatgtcctggatagcatgaacaagcactacaagaaagag
gcgtactattataaggacacagtcactgacctgttgaagttcattagaaacttggctgct
cactttgaggagaaaagcaatataaaggacattattgaagatccctgccagtatttcctc
aagaagtttccagatctcacgatttatgtctatgaaactctgaagcacttggggatggga
tacgataagcattttccaaaaccttcaagttctcttctgtag
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