Geotrypetes seraphini (Gaboon caecilian): 117346557
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Entry
117346557 CDS
T09159
Symbol
ABCF1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gsh03012
]
117346557 (ABCF1)
Translation factors [BR:
gsh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117346557 (ABCF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_22
AAA_14
AAA
AAA_28
RsgA_GTPase
NACHT
ABC_tran_Xtn
AAA_15
MMR_HSR1
AAA_23
ATP-synt_ab
AAA_18
Motif
Other DBs
NCBI-GeneID:
117346557
NCBI-ProteinID:
XP_033772215
UniProt:
A0A6P8NTM8
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All DBs
Position
12:complement(118383076..118453512)
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AA seq
922 aa
AA seq
DB search
MPKGGKTKQQQPAGEEWLGDEEREQSSRTPAAGDDKLVKKGKKDKKGKKSFFEELATDNK
QVIEEEITAKEKEQQQQQKKKRDKRKDEKKKKKDDEEEEEQEVMEKLKKLSVQPSDEEEE
QVSVSITKAGKKKKGGNIFAALNQDQSEEEEEEDKKPAKPNKSKKQQVASDDDEEEEEEE
EVDQKQSKKGKKEKAKIKPKDMEVEVEAENKKKNQKKDKVKGKQADSTVRSDGEEESDEE
EIPKETTKGKHAGKKSAGQAADVQKKEKGKKNKVVQNKFVALKDEASEDEIEEDDDDDDE
KPKPGEGPSDEENEEEKEKKEDPYANLSKKEKKKLKKQQDYERQVATLKSATAAENDFSV
SQAELSSRQAMLENASDIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLL
KHIANRALNIPPNIDVLLCEQEVVADNTPAVQAVLKADTKRLKLLEEEKRLQARLEKGDD
SAGDRLEKVYEELRATGAASAEAKARRILAGLGFNPEMQNRPTKKFSGGWRMRVSLARAL
FMEPTLLMLDEPTNHLDLNAVIWLNNYLQSWKKTLLIVSHDQGFLDDVCTDIVHLDNQKL
YYYRGNYMTFKKMYQQKQKELQKQYDKQEKKLKDLKAGGKSAKQAQEKVTKEALTRKQQK
CRKKNQEDEGNEPAELLKRPREYTVKFTFPNPPPLSPPILGLHAVDFGYEGHLLLFKNLD
FGIDMESRICIVGPNGVGKSTLLLLLTGKLPPTKGEMRKNHRLKIGFFNQQYADQLNMEE
TATEYLQRNFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACRQPDVII
LDEPTNNLDIESIDALSEAVNEYKGAVIIVSHDARLITETNCQLWVVEEQTANQIEGDFE
DYKREVLESLGEVMVNKAAAKE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagggcgggaaaacgaagcagcagcagccggccggcgaggaatggctgggggac
gaggagcgggagcagagctccaggaccccggcggcaggagacgataaattggtaaagaag
gggaagaaggacaagaaggggaagaagtcgttctttgaggagctggctactgacaacaag
caagtcattgaggaagagattactgccaaagaaaaggagcaacagcaacaacagaagaag
aaacgagacaagagaaaagatgaaaagaagaagaaaaaggatgatgaggaggaggaagaa
caggaagtgatggagaagctaaaaaaactctcagttcagcccagcgacgaagaggaagag
caagtgtctgtatctatcaccaaagctgggaagaaaaagaaggggggaaatatctttgct
gccctgaaccaggaccagagtgaggaagaggaggaagaggacaaaaaaccagccaaaccc
aacaaaagcaaaaagcagcaagtagcctctgatgatgatgaggaggaggaggaggaggag
gaagtggatcagaaacagagcaagaagggcaaaaaagaaaaagcaaagataaagccaaag
gatatggaggtggaggtggaggcagagaacaaaaagaagaatcaaaagaaggataaagtg
aaaggaaaacaggctgacagcacagtacggagtgatggggaagaggagagcgatgaagag
gagattcctaaggagaccacaaaaggaaagcatgctgggaagaaatctgcaggccaggca
gcagacgtgcagaaaaaagagaaagggaagaaaaataaagtggtgcagaacaaatttgta
gctttgaaagatgaggccagtgaagatgaaattgaagaagatgatgatgatgatgatgag
aagcccaaaccaggagaagggccttcagatgaggaaaacgaagaagagaaggagaagaaa
gaagatccttacgcgaatctcagcaagaaggagaaaaagaagctgaaaaagcagcaggat
tacgaacgtcaggtggccaccctgaagtctgcgactgcagcagagaatgacttttcagtg
tcgcaggcagaactgtcctcgcgtcaggcaatgctggagaatgcatccgatatcaagctg
gagaaattcagcatttccgcccacggcaaggagctctttgtcaacgcagatctctacatt
gttgctggccgtcgctatggcctggtgggacccaatggcaaagggaagaccaccctattg
aaacacatcgccaatcgagctctgaacattcctccgaacattgatgttctgttgtgcgag
caagaggtggtggctgataataccccagcagttcaggctgtcttgaaagcagacacaaag
cgcctgaaattgctagaagaggaaaagaggttgcaggcccggctggagaagggagatgac
agcgccggggaccgcctggaaaaagtttatgaagagcttcgagccacaggtgctgcctct
gcagaagccaaagcccgccggatcctggctggtctgggtttcaaccctgagatgcagaac
cgacccactaagaagttctctgggggctggcggatgagagtctcattggcaagagccctc
ttcatggaacccaccttgcttatgctggatgagcccaccaatcacctggacctgaatgct
gtcatctggctgaataattacctgcaaagctggaagaaaacactactcattgtttcccat
gaccagggctttttggatgacgtttgcacagacatcgtacacttggacaaccagaagcta
tattactatcggggcaactacatgaccttcaagaaaatgtaccagcagaagcagaaggag
ttgcagaagcagtatgataaacaggagaagaaactgaaggacctaaaagctggtggcaag
tcagccaagcaggcgcaagagaaggtgacaaaggaggccctgacgcggaagcaacagaaa
tgccgtaagaagaaccaagaggatgaagggaacgagccagcagagctgctaaagagaccg
cgggaatacacagtgaaattcactttccccaaccctccgccgctcagcccaccaatctta
ggactacatgctgtagattttggctacgaaggtcaccttttgctgttcaagaacttggac
tttggcattgacatggagtctcgaatctgtattgtggggcctaatggagtgggaaagagt
actcttttgctgctactgacagggaagcttcctccgaccaaaggggagatgaggaagaac
cacaggctgaaaattggtttcttcaaccagcagtatgccgaccagctaaacatggaggag
acggccaccgaatacctgcagagaaactttaatttgccctaccaggatgcccgcaagtgc
ctgggacgttttgggctggaaagccatgcccacaccatccagatctgcaaactctcaggg
ggacagaaggcacgggtggtgtttgcagagcttgcatgtcgacagccggatgtcatcatc
ctggatgagcctacaaataacctggacatcgagtcaattgatgctctatctgaggcggtg
aatgagtataaaggagctgtgatcattgtcagccatgacgcccggctcatcactgagacc
aattgccagctctgggtggtggaggagcagacagccaatcagatagagggagactttgag
gactacaaacgggaggtgctggagtcactgggagaggtgatggtgaacaaagctgccgcg
aaagagtga
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