Geotrypetes seraphini (Gaboon caecilian): 117346575
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Entry
117346575 CDS
T09159
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117346575 (HFM1)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117346575 (HFM1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117346575 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
117346575
NCBI-ProteinID:
XP_033772271
UniProt:
A0A6P8P9R1
LinkDB
All DBs
Position
12:24649111..25003815
Genome browser
AA seq
1290 aa
AA seq
DB search
MADKELKSWYLDPVPAVSEIPSTQDLQKELENCKPLEQEETGNLKYRKTLFKMPKHLSEL
LEYHASSGEIVLDTISNTSLQNMGGKQMNSPAAESEEAFGLLRPVTEIPTQFKNIFKEFP
YFNYIQSKALDDLLYTDRNFVISAPTGSGKTVIFELAITRLLMEAPMPWSNVKIVYMAPI
KALCSQRFEDWKEKFGPIGLICKELTGDTQIDDLFEMQHAHIIMTTPEKWDSMTRKWRDN
TLVQLVQLFLIDEVHVVKDESRGATLEVVVSRMKTIQSSLLRSCENRGAVVPLRFVAVSA
TIPNAEDISEWLSHGEAAAICLKMNEMHRPVKLRKVVLGFPCSSSQTEFKFDLSLNYKIS
SVIQTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMSTEHKQRLLKTANAVKDFKLKDL
LICGIGYHHAGVDVSDRRLIERTFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYASG
MFQEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLNGADTIESSLHRHLIE
HLNAEIVLHTITDVNIALEWIKSTFLYIRALKNPVHYGFPSGLDRTGIEAGLQELCLKNL
NDLSSVSLIRMDEEINFKPTDTGRLMALYYITYGTVKQFCRINGTESLAELVEMVSNCNE
FSDVQLRTNEKKILNTLNKDKNRITIRYPMEGKIKTREMKVNCLFQAHLGCIPIQDFSLT
QDIAKIFRNGTRVTKCLSEFLASQENKFSAFLNSLILAKCFRSKLWENSPYISKQLEKIG
VTLSNAMVNAGLTSFKKIEDINARELELIVNRHPPFGNQIKEAVTYLPKYELGVEQITRY
NVTTAEIIVTIALTNYKLLQNKRTAPDSHYVTLVIGDADNQVIYKQKIMDSALLKTGSWT
RKVDIKRAVKSEELSINVISSEYVGLDIQQKYTVFYTGPKKFGIRGTDTKKSDTCEEYQD
STAKKSNVGKIDIQQKVEIKAESPFSSYLTDLRNRNALSSAPSIKRLKMQILSKTQNLDL
QQFSFIPQASCPALPRTQQIQKSASPSEWQWNSVTFHGSSQQHEQSECFAQKFSVWKHPI
TSGEKKFHSLATNTNPEISLISNLTDADKSQSKSMEALHVSFDLGDDVWNDFDDDKLISA
CSSSAMETEGDSVSLNTKAKNVFFQSAVEHAASLQKMQSKFPHKVSKRLSKMQGMSAEDS
QKDLPFNISSNIKSELNGNKTANYYLVPFQPSENTMCTASTIENSLKPSEVTGECDLFSW
NYTNKKSINTREYIADDETKAFMGIFDDIF
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagagttgaaaagctggtaccttgaccctgttccagctgtttcagaaatt
ccatctactcaggatttacagaaagagttagaaaactgtaaaccattagaacaagaagaa
actggaaatttaaagtataggaaaaccttgtttaaaatgcctaagcatttatctgaactt
ctagaatatcatgccagttctggtgaaatagtgttagatactattagcaacaccagctta
cagaatatgggaggaaaacagatgaacagccctgcagcagaatcagaagaggcttttggg
cttttaagacctgttacagaaatccctacacagttcaaaaatattttcaaggaattcccc
tattttaactatatacagtctaaggctttggatgatctcctctatactgatcggaatttt
gtgatttctgccccaactggttctgggaaaaccgtcatatttgaactagcaataacgagg
ttattgatggaagctcccatgccttggtcaaatgttaaaattgtctacatggcaccaata
aaggctttgtgcagccaacgttttgaagactggaaggaaaaatttggacccatagggctt
atttgcaaggaacttacaggagatacacaaattgatgatttatttgaaatgcagcatgcc
catattatcatgacaacaccagaaaaatgggacagcatgactagaaaatggagagataac
actttagttcaactggttcaactctttctcatcgatgaggtgcatgttgtgaaagatgaa
agccgcggtgcaacacttgaagtggtagtcagtcgaatgaaaacaattcagtcctctctg
ttacgtagctgtgagaatcgtggtgcagttgtacctttgagatttgtagctgtttctgca
acaatcccaaatgctgaagatatttcagaatggctttcgcatggtgaggcagcagccata
tgcctgaaaatgaatgaaatgcatcgaccggtaaaactacgcaaagtagtactgggtttc
ccatgcagcagcagccaaacagaatttaaatttgatttaagtcttaattacaaaatatct
agtgttatacagacttactcggaccaaaagccaacgcttgtgttttgtgccacaagaaaa
ggagtacagcaggcagcttctgttcttgtgaaagatgctaaatttattatgagtacagaa
cacaaacaaaggctgctaaagactgcaaatgcagtgaaagacttcaaactgaaagatctt
ttaatatgtggtattgggtaccaccatgctggagttgatgtgtctgacagaaggttaatt
gaaagaacttttactgtgggagacttaccagtactctttaccacgagtacattagcaatg
ggagtaaatctgccagcacatttagtagttataaaatcaacaatgcactatgcttcagga
atgtttcaagaatatagtgaaactgatatactacaaatgattggcagagcaggcagacct
cagtttgacactacagctaccgcagtcattatgaccaggttaagtacaagagagaagtat
gtacagatgttaaatggtgcagacactatagaaagcagtttgcacagacaccttattgaa
cacttaaatgcagaaattgtgctgcatactatcacagatgttaacatagctttggaatgg
ataaagtctacattcctgtacatcagagctttgaagaatccagtacattatggatttcca
agtggattggacaggactggaattgaagcaggattgcaagagctgtgtttgaagaacttg
aatgatttatcatctgttagtttgattagaatggatgaagaaataaattttaagccaact
gacactggaagactgatggctttgtactacattacatatggtacagtgaagcagttttgc
agaattaatggaacagagtcattagctgaactggttgaaatggtatcaaactgcaatgaa
ttttcagatgtacagttaagaacaaatgagaagaaaatacttaacacgctgaataaggac
aagaacagaataactataagataccccatggaagggaagataaaaacaagagaaatgaaa
gtgaattgtctttttcaggcccatcttggctgcattcctattcaagatttttccctgaca
caagacatagctaaaattttcagaaatggcacaagagtcactaaatgtttatctgaattt
ctggcatcgcaagaaaataaattttctgcatttctgaactctttgattttggctaagtgt
ttcaggtcaaaactatgggaaaactctccatacatatccaaacagctggaaaaaattggg
gtaacattatcaaatgctatggtaaatgcaggcctaacgtcttttaaaaaaatagaagat
atcaatgcaagggaacttgagctgattgtgaacagacaccctccatttgggaaccaaatt
aaagaagctgtaacgtatttaccaaaatatgaacttggtgttgaacagatcacaagatat
aatgttacaacagcagaaataatagtgaccattgcattaacaaattataagctgctacag
aacaaaagaacagcaccagactcccactatgtaaccttagtcataggagatgctgataac
caagtgatttataaacagaaaatcatggattctgctctattaaaaactggaagctggact
agaaaagttgacataaaaagagctgtaaagtctgaagagctgagtataaatgtgatcagt
tctgagtatgttggactcgatatccagcagaaatacaccgttttttacacagggcccaag
aagtttggaatacgagggactgatactaagaaatctgatacatgtgaggaatatcaagat
tctacagcaaaaaaaagcaacgtgggtaaaattgatatacaacagaaggtcgagataaaa
gcagaatcaccattttcttcttacctgaccgatttaagaaaccgaaatgcactttcatca
gctccctcaataaagcgactaaagatgcagatattaagtaaaactcaaaatctagatctt
cagcaattttccttcataccacaagcttcatgtccagcattacccaggactcaacaaatt
cagaagtctgcatcaccttcagaatggcagtggaattctgtcactttccatggaagttct
cagcagcatgaacaatcagaatgttttgcacaaaaattttctgtatggaaacatcctatt
acttcaggtgaaaaaaaatttcactcactggcaacaaacacaaatcctgaaatatcttta
atatcgaacttgactgatgcagataaaagccagtcaaagtcaatggaagctttgcatgtg
tcatttgatttgggggatgatgtttggaacgattttgatgatgataaattgatcagtgct
tgtagctcttcagccatggagactgaaggagactcagtgtctcttaacacaaaggctaaa
aatgtcttctttcaaagtgcagtagaacatgcagcatcacttcaaaaaatgcagagcaag
tttccacataaagtttcaaagaggttatccaaaatgcaaggtatgtcagctgaagattca
caaaaagatttacctttcaatatatcatcaaatataaaatctgagctaaatggaaacaaa
actgctaactactatctagttccttttcaaccatcagaaaatacaatgtgtactgcaagc
accatagaaaattcactgaaaccttctgaagtcactggagagtgtgatctttttagttgg
aattacacaaataaaaagagcataaataccagggaatatattgcagatgatgaaaccaag
gcctttatgggaatatttgatgatatattttaa
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integrated database retrieval system
