Geotrypetes seraphini (Gaboon caecilian): 117346597
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Entry
117346597 CDS
T09159
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117346597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117346597
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117346597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
117346597
NCBI-ProteinID:
XP_033772319
UniProt:
A0A6P8NNV4
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Position
12:complement(115247771..115251129)
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AA seq
682 aa
AA seq
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MSYSKRDLDDLKPWVEKTVKRVLGFSEPTVVTAALNCVGKGMEKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSKHSRSGSDRSRKRELKEVFGDESDLSKDASRGKKRRLPRFEEVE
EEPEVIPGPPTESPGMLTKLQIKQMMETATRQIEERKKQLSFIRPTASQRISSLQPERTS
IGNTIQPSQAATFINDAIEKARKAADLQSRIQAQLALKPGLIGTTNMVGLANLHAMGIAP
PKVELKDQTKPTPLILDDQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPS
EDLESNTFFDSRVSIAPAQRQKRMFKFHERGKFEKIAQRLRTKAQLEKLQAEISQAAKKT
GIHTSTKLALITPKKELLEGGIPEIEWWDSYIIPNGLELKEEVLSKREEFFGITNLVEHP
AQLNPPVDSDSPVTLGVYLTKKEQKKLRRQTRREAQKEVQEKVRLGLMPPPEPKVRISNL
MRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTTEQRKEKKMKKLKEDISQGV
HVAVYRVRNLSNPAKKFKIEANAGQLYLTGVVILHKDVNVIVVEGGPKSQKKFKRVMLHR
IKWDEQTTSSKGKDDNGSDEESIVKGNKCVLVWEGTTKERSFGDMKFKQCPTENMAREHF
KKHGVEHYWDLALSMSVLETTE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcctattccaagcgggacctggatgacttgaaaccatgggtggagaagacagtgaag
cgggttctgggtttctcagagcccactgtggtgactgcagcactgaattgtgttgggaaa
gggatggagaaaaagaaagctgctgaccacctgaaaccctttcttgatgactctactttg
cgatttgtggacaagttgtttgaggcggtggaggaggggcgaagttccaaacactctaga
tcgggcagtgacaggagccggaagcgggagctaaaggaagtgttcggggatgaatctgat
ctctcgaaggatgcttccaggggtaaaaaacgtcgccttccacgcttcgaagaggtggag
gaggagccagaagttatccctggcccacccactgagagtccaggcatgctgaccaaactg
cagatcaagcaaatgatggagacagcaacacgtcaaattgaggagaggaagaagcaactg
agtttcattcgtcccacagcatcacagagaatttcctccttgcagcctgagcgtacatcc
ataggaaacaccattcagccttcgcaagcggccaccttcatcaacgatgccatagaaaag
gcgaggaaagctgcagacctgcagtctcgaatccaggctcagctggctctgaaaccaggc
ctcattggcaccaccaacatggtgggcttggctaacctgcatgccatgggaattgcccct
ccgaaggtggaactgaaagatcaaaccaaacccacacccctgattctggacgaccaaggc
cggacagtggatgccacagggaaagaaattgaattaactcaccgcatgccaaccctgaag
gccaacatccgggcggtgaagagggagcagtttaagcagcagctaaaagagaaaccctcg
gaggatttggaatccaacactttctttgactcgcgcgtttccattgctcctgcgcaacgt
cagaaacgaatgttcaaattccacgaaaggggcaagtttgagaaaattgcacagaggctg
cgaacaaaggctcagcttgaaaaactgcaggccgagatctcccaagctgccaagaagact
gggatccatacctctaccaagcttgctctcatcacccccaagaaggagttgctggaggga
ggtatccctgagatagagtggtgggattcctatattatccccaatgggcttgaactaaaa
gaagaagtgttatcaaaacgagaagagttctttggcatcacaaaccttgtggagcaccca
gcacagctaaatccaccagtcgacagcgattcaccagtgactcttggagtgtatctaaca
aaaaaagagcaaaaaaagttacggcgccagacgcggagagaagctcagaaggaagtgcaa
gagaaagttagactaggtcttatgcctcctccagaaccaaaagtgcgaatatcgaactta
atgcgagttttggggactgaagctgttcaggatcccacaaaagtggaagctcatgtgaga
gctcagatggcaaagcgacaaaaagctcatgaggaggcaaatgcagcccgaaaactgaca
acagaacagaggaaagagaaaaaaatgaaaaaactaaaagaagacatttcacagggtgtt
catgtggcagtgtacagagttcggaatttgagtaatccagccaaaaaatttaaaattgaa
gcgaacgccggacagctgtatcttacaggagttgtcatcctgcataaagatgtgaatgtg
atcgttgtggaaggagggccaaaatcacaaaagaaattcaaacgtgttatgctacaccga
ataaaatgggatgaacaaacgaccagctctaaaggaaaagatgacaacggatctgatgaa
gaatcgatcgtaaagggaaacaagtgtgtcttggtctgggagggaacaacaaaagaacgc
agctttggtgacatgaaatttaaacagtgcccaactgaaaacatggcacgggaacatttt
aaaaaacacggagtggagcattattgggacttggctttaagcatgtctgtgttggaaacc
acagaatga
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