Geotrypetes seraphini (Gaboon caecilian): 117346776
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Entry
117346776 CDS
T09159
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117346776 (MSH4)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117346776 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
AAA_28
nSTAND3
GNC1_N
ATPase_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
117346776
NCBI-ProteinID:
XP_033772757
UniProt:
A0A6P8NAM1
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Position
12:complement(39240023..39343791)
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AA seq
950 aa
AA seq
DB search
MIKKTVFRSDGGVIAEETSASYSDRCSSSSEKERRPKYRLGLLETPQPDAAPPGVPAALG
SGLLSEDKSVWVKPGLGRDSLSSGVTPGTSTDLLRDSYLGDKSSFVENISTFNCTTVTSS
ASLKAYDNTRKTPLSAGSHYARSVCKFRTPQTGYSVTSSSAVSAYSAASVIIAVVEGRGL
ARGEIGMASIDLKNPEVILSQFADNTTYAKVITKLKILTPLEIIMSNTACDKGNTTKLFS
LITENFKNVTFTTVQRKYFNETKGLEYIEQLCTSEFSTVLMEVQSKYYCLAAVGALLKYV
EFIQNSVYAPKSLKICFQGSEQTAMIDSTSAQNLELLVNNRDSRNGHTLFGVLNYTKTPG
GSRKLRSNILEPLVDMETINTRLDCVQELLQDEELFFSLQSVISRFLDTEHLLSNLVQIP
KQDTDKAADSKITNLISLKHSLELVDPLKVVLRNCKTPLLKAYYTSLEDNRFEVILEKIK
TVINDDTRYTKGCLNMRTQKCYAVKPNINEFLDIARRTYAEIVDDIAGMITQLSEKYNLP
FKTSFSTTRGFFIQMNIDGISLPNGQLPLEFIKVTKMKNAYSFTSADLIKMNERCQESLR
EIYHMSYLIICKLLGEIYEHIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAI
KQGWHPILEKISVTKPVSNNTYITEGSNFVIITGPNMSGKSTYLKQLALCQIMAQIGSYV
PAEYASFRIAEQIFTRIGMDDDIETNSSTFMKEMKEITYIVQNSNDKSLIIIDELGRGTS
TEEGIGICYAVCEYLLNLKAFTLFATHFLELCHIDTLYPNVENNHFEVQHVRSSTGNREM
ISYTYILSKGHTEEKNYGLKAAEVSSLPPSVLLDAKELIAQIVKQILKNQKSTSEALRQK
AVYHLATRLVQTARNSRLEPDSLRIYLTGLKKRYEADCLAAGQAQIETEK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaaaaccgtctttcgtagtgatggcggcgtgatagctgaggaaacgtctgct
tcctactctgaccgttgttcatcctcttcggagaaggaacgccggccgaaatatcgctta
ggactgctggagaccccgcagcccgacgcagcgccacctggcgttcccgctgccttaggc
tctgggctgttatcggaggacaaatctgtgtgggtgaaaccagggctcggaagggattct
ctcagcagcggggtcacccctggtaccagtaccgacctcctcagagattcttatctggga
gacaaaagttcttttgtggaaaatattagcacattcaattgtactactgttacaagttct
gcttcattaaaggcctatgacaataccagaaaaacaccactttctgctggtagccactat
gcaagatcagtttgcaaatttcgaactccgcagacaggatattcagttacatcttcatct
gcagtctctgcttactctgctgcatcagttattatcgctgtagtggaaggaagaggactt
gccagaggtgaaataggaatggctagcattgatttaaaaaatcctgaggtgatactgtcc
cagtttgctgacaatacaacatatgctaaggtaatcaccaagctcaagattttgacacca
ttagaaataataatgtcaaacactgcttgtgataaggggaatacaaccaaactatttagt
ctgataacagaaaatttcaagaatgtaactttcactaccgtacaaaggaaatactttaat
gaaacaaaaggtctagaatacatcgaacagttgtgtacatctgaattcagcacagtttta
atggaggttcagtctaagtactactgcttagctgctgttggggctttgctcaaatatgtt
gagtttattcagaattcagtttatgctccaaagtctctcaaaatttgtttccaaggaagt
gaacagacagccatgattgattcaacatcagctcaaaatctagagctacttgttaacaat
agagattccaggaacggtcataccctttttggagttctaaattacactaaaacaccaggt
ggaagccgaaaacttcgatctaatatcttggagcctctagttgacatggaaacaattaat
acaagattggattgtgttcaggaactacttcaggatgaagaactcttctttagccttcag
tcagttatttcaagattcttggatacagaacatcttctttcaaaccttgtacaaattcca
aagcaggacacagataaagcagcagactcaaaaataacaaatttaatttccttaaagcat
tctttagaacttgtggatcccttaaaggttgttttgagaaattgcaagacaccactatta
aaggcatactatacttcactagaagataataggtttgaagtcatacttgaaaagattaaa
actgttattaatgatgacacaaggtacacaaaaggatgcttgaatatgaggactcaaaaa
tgttatgcagtcaagccaaatattaatgaatttcttgatatagctcgtagaacttatgca
gagattgtagacgacatagcaggaatgataacacaactttcagaaaaatacaacctaccc
ttcaagacaagcttcagcactacccgaggattttttatccaaatgaatatagatggcata
tcattgcctaatggtcaacttcctttggaatttataaaggttactaaaatgaagaatgca
tacagctttacttcagcagacttaattaaaatgaatgaaaggtgccaagagtctttaaga
gaaatatatcacatgtcatacttgattatatgtaaactacttggtgaaatatatgaacat
atccattgtctctataaactgtctgacacagtttcaatgttggatatgctgttgtcattt
gcccatgcctgtacactttctgactatgttcgacctgagtttactgacaccttagcaatc
aaacagggatggcatcccattcttgaaaagatttctgtaactaaacctgtatctaacaac
acctacatcactgaaggcagtaattttgtcattatcactggaccaaacatgagtggaaaa
tcaacataccttaaacaacttgctctttgtcagattatggcccagataggttcttatgtg
ccagcagaatatgcatcttttaggattgctgaacaaatttttactagaataggaatggat
gatgatatagaaactaattcatcaacattcatgaaggaaatgaaagagataacatatatc
gtgcagaattccaatgacaaatcacttataataattgatgaattaggcagaggtaccagt
acagaagaaggcattggcatttgttatgcagtctgtgaatacctgctgaacctgaaggct
tttacactgtttgccacacattttttggaattgtgccatatagatactttatatcccaat
gttgaaaacaatcattttgaagttcaacatgtgagaagtagtactggaaacagggaaatg
atatcttatacctacatactttctaaaggacacacagaggaaaagaactatggattaaaa
gctgctgaagtttcttcattacctccatcagtcttgttggatgcaaaggaactcattgct
cagattgtcaaacaaattttgaaaaatcaaaagagcacttctgaggctttaagacagaaa
gctgtgtaccatttagcgacaagactggttcagactgctagaaactcccgtttggaacca
gacagtttgagaatatatttaacaggtcttaagaaaagatatgaagctgattgtcttgca
gctggacaagcacagattgaaacagaaaaataa
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