Geotrypetes seraphini (Gaboon caecilian): 117346783
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Entry
117346783 CDS
T09159
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117346783 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117346783 (ABCA4)
Transporters [BR:
gsh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117346783 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
SRP54
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
117346783
NCBI-ProteinID:
XP_033772764
UniProt:
A0A6P8NPZ3
LinkDB
All DBs
Position
12:21584193..21805962
Genome browser
AA seq
2349 aa
AA seq
DB search
MRFNDQVKLLLWKNWTLRKRQKIRFVVELVWPLSIFIVLVWLRRVNPLYGQHECHFPNKA
MPSAGMLPWLQGIFCNLNNPCFRSPTPGESPGIVSNYNNSILSRAYRDIQDLLLENPEIQ
HLSRIWREIHSLSHSMETMRISPGTVTGKGIRIEDILKDDETLTVFLLKDAGLSDSVVFQ
LINSQVRIEQFVNGMPDVALKDIACSQTLMDRFLIFTSRRGMNVVRNAMCVLSQHRLQKI
EDIFYANIDFFKLFQLLPSVLDMSSPGIDLRYWGRILSNITGSFRELSQRQSIQDLLWAL
QPFVQEGGPRTFSQLLDSLSALLCGYPEGEGTRVFSFNWYEDNNYKAFLGVNTTKEEINS
YDKTTTPFCNALMQSMESNPATKIAWRAMKPLLMGKILYAPDSPAARQILKHANSTFEQL
ERLRQLGKAWKEVGPQLRHFFQDSVQMKMIRDTLKNPTVKDFLNRQLGDDSFTADDVINF
FYNGQPRDRPDDLVNFDWRNVFSVADQVVGLLNPYMECLTLDKFEGHTQESHLTHQALYL
LEENKFWGGLVFLDFFPWTNKLPPHVKYKIRMDIDVVEKTNKIKDRYWDPGPRADPVEDL
RYIWGGFAYLQDIIDHGIIESQTSNERPIGVYLQQMPYPCFVDDSFMITLNRCFPIFMVL
AWVYSVSMMVKDLVLEKELRLKEAMKNLGITNEVIWYSWFIDGFIVMATSTLLLTLLIMY
GRVLPYSNPFLVFLFLMAFSTATIMQCFLFSVFFCKANLAAACSGVIYLTLYLPHILCFA
WQDHLTFKMKTLVSILSPVAFGFGTEYLSRYEEQGIGLQWHNIQTSPVEGDEYSFLFSTV
MMLLDAFLYGVTAWYIDHVFPGEYGIPRPWYFPLLATYWCTFEHPKDTDDDSISTEVSMQ
DHLDENSGPEARDTNPDNREETDEKVREEEVKRDCTQKAEKEISRDGKTETTEKRERKVC
KHKEKRNMEEKQDKDEEEKERMDKDKALNATPFFEPEPAGLIPGVCVLDLVKVYKSSYKP
AVDRMNLTFYEGHITAFLGHNGAGKTTTLSILTGLFPPTSGTVLVYGKDIKRNVDSIRQS
LGMCPQHNILFQNLTVAEHIIFYSQLKGRSREEAEEELKVMLEDIGLAHKRDEEVQNLSG
GMQRKLSVAMAFVGKAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEAD
LLGDRIAILSQGKLHCCGSPLFLKNCFGTGFYLTLVRRMKNIKDTRKKDAISCSSDCSCS
CSSCSSRNEDETVEQEMDGDVSALTELIHHHVPDAKLIESIGQELVYLLPGKDFKHRAYA
SFFRELEEMLPDLGLSSFGISDTPLEEIFLKVTAESGSETENSGSVLENVPHFLLRRPSE
NATSGSSGLPILTVPDQHAPGTEGKGSRQIKHFELLHQQFRALIIKRFHHSVRSQKDFIA
QIVLPPSFVLLALTFTTIIPPFGEYPSLTLHPWMYGQQVNFFSNEQPDSKQVASLAEAFL
KKPGFGTRCMKETPLFHYPCSGTSHDWTVPPVPPSITNILLSQEWTPDNPSPSCTCSSQN
KLIMLPECPEGAGGHLPPQRTQPSSEILQDLTGRNISDFLVKTYPNLIRSSLKSKYWVNE
RRYGGISVGGRLPALQITAEEILEFFTQLGQILNITGGHTTRSVSGEMQNFLKYLETEEN
IKVWFNNKGWHAMVSFLNVANNAILRASLQKGNDPEEFGITTESHPLNLTKGQLSEVTVL
TTSIDVIVAICVVFAMSFIPASFVLYLIQERVSKAKHLQFVSGVTPTVYWLSVFMWDIVS
YTVSAVIVVCIFIGFGKRAYTSLSNLPALIALLLLYGWAVTPMMYPASYLFSVPSTAYVA
LSCINLFIGINSSAITFILDLFENNRSLLKLNEGLKDVLILFPHFCLGRGLIDLAMNQAV
TDVYARFGEEHISHPFQWEFLGKNLTAMAVEGVVYFTLTLLIQHRFFLSRWSADLPKEPV
DGEDEDVAQERQRILRGGGKHDIMQLKELTKIYSGRQTPAVDKLCVGVRPGECFGLLGVN
GAGKTTTFKMLTGATAVTSGDATVAGYSILTAIADVYQKMGYCPQFDALDDLLTGREHLQ
LYGRLRGIPPGETDKISDWGIEKLGLTKYADHLTGTYSGGNKRKLSTAISLIGCPSVILL
DEPTSGMDPQSRRFLWNAIVSVIKEGRAVVLTSQSMEECEALCTRLAIMVKGSFKCLGTI
QHLKCKFGEGYVVTMKIGASKAGCPPDLTPVEKFMQANFAGSLQREKHYNMLQYQISSSS
LARIFRLLLSNREDLNIEDYSVSQTTLDQVFVNFAKHQTEDETILLHPRAAGSKWGVKVA
PAQASKAAD
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaatgatcaagtcaaattgctgttatggaagaattggacactaagaaaaaga
caaaagattcgctttgttgtggaacttgtatggcctttgtctatattcattgtccttgtc
tggttaaggagggtcaatcctctctatggtcaacatgaatgtcatttccccaataaggca
atgccttcagcagggatgttgccatggttgcagggaattttttgcaacttgaataaccct
tgctttcgtagccccactcctggagagtctcctggcatcgtttcaaactacaataattcc
atcttgagtagagcatatcgtgatatacaagatctgctgctggaaaacccagaaatccaa
cacctgagtcgaatctggagagagattcactctctctctcactcaatggagacaatgagg
atcagccctggaacagttacaggcaaagggatcagaattgaggatatcctaaaggatgat
gaaactctgactgtcttcctacttaaagatgctggtctctcagactctgtggttttccaa
ctaattaattcacaagtgcgcatagagcagtttgtcaatggaatgcctgatgtggctttg
aaggacatagcttgcagccagacactcatggaccgcttcttaatttttaccagccgaaga
ggtatgaatgtggtacggaatgcaatgtgtgtgctgtctcagcaccgactacagaaaatt
gaagacatcttctatgcaaacatagatttctttaagctgtttcaactgcttcctagtgtc
ctagacatgagctctccaggcatagacctgcgatactggggaagaatcctgtctaacatt
actggatcttttcgggagctaagtcagaggcagagcattcaggacctgctgtgggctctg
caaccatttgtacaggaaggaggtccgaggacattcagtcagctcttggattccctctct
gccctcttgtgtgggtatcccgagggagaaggtaccagagtgttctccttcaactggtat
gaagataataattacaaagccttcttgggtgtcaacaccaccaaggaagaaattaattct
tacgataaaacaaccacgcccttttgtaatgcactgatgcagagcatggaatcgaaccct
gcaaccaaaatagcttggcgtgcaatgaagccactgctgatgggaaaaatcctttatgca
cccgattcccctgctgcgaggcagatccttaagcatgcaaattctacatttgaacaacta
gaacgactcagacagttgggcaaagcctggaaagaagtgggacctcaactacggcacttc
ttccaagacagtgtgcaaatgaagatgattcgagacacactgaagaaccctacagtaaaa
gatttcctgaacagacagcttggggatgacagtttcactgctgatgatgtgataaacttc
ttttacaatggacagccgcgggatcggccagatgacctggtgaactttgactggcgaaat
gtcttcagtgtcgctgatcaggttgtgggcttgttaaatccttacatggagtgcttgacc
ctggataagtttgaaggtcacacccaagaatctcatctgacccatcaagctctttatttg
ctggaggaaaacaaattctggggcggacttgtctttcttgactttttcccctggacaaac
aagctcccacctcacgtgaagtataagatccgaatggacatagatgtggtggagaaaaca
aataaaatcaaagacagatactgggatcctggtccaagagctgacccagtggaagattta
cgctacatctggggaggttttgcatacctacaagacatcatcgatcatgggattatcgag
agtcagactagcaatgaaaggcccataggagtctacctccagcaaatgccatatccctgc
tttgtagatgactcttttatgatcacgttgaaccgctgcttccccatcttcatggtgctt
gcttgggtctattcggtctccatgatggtgaaagacctagtgctggagaaagagctgagg
ctaaaagaggccatgaagaatctgggcatcaccaatgaggtgatctggtattcatggttc
atagatggcttcatcgttatggcaaccagtacactcctgctaacactgctcattatgtat
ggcagggtactcccctacagcaacccttttctcgtcttcctgttcttgatggctttctcc
acagcaacaatcatgcagtgcttcctgttcagtgtcttcttctgcaaagccaatctggct
gctgcctgcagtggggtgatctaccttacactgtacttgccacacatcctctgctttgcc
tggcaggaccatctgacctttaaaatgaagacgctggtaagcatcctgtcccctgtagcc
ttcggttttggcacagagtacctctctcgttacgaggaacaaggtattgggctgcagtgg
cacaatatccagactagtcctgtggagggcgatgagtacagtttcctcttctccactgtg
atgatgctgctggatgccttcctgtacggagtgactgcctggtatattgatcatgtattt
ccaggggagtacgggataccaaggccttggtatttcccgctgctggccacctactggtgc
acatttgaacatcctaaggacacggatgatgattccatcagcactgaagtgtcaatgcag
gatcatctggatgagaattcagggccggaagcaagagatacaaatccagacaatcgagaa
gaaacggatgagaaagtgagagaggaggaagtaaaaagagactgtacacaaaaagcagaa
aaagaaatcagtagagatggaaagactgaaaccacagagaaaagggaaagaaaagtatgc
aaacacaaggagaaaaggaacatggaagaaaagcaggataaagatgaagaagaaaaagag
agaatggacaaagacaaagctctgaatgcaacccccttttttgaaccggagcctgcaggc
ctgattccaggagtctgtgtgttagacttggtgaaagtgtataagagcagctacaagcca
gcggtggataggatgaatcttacgttttatgaaggccacatcactgcctttcttggtcac
aatggtgctgggaagaccacaaccttgtccatattgacaggattgttccctcctacctct
ggcactgtgctggtatatggcaaggacattaaaagaaatgtggactcaattcggcagagc
ttgggaatgtgcccacagcacaacattctgtttcagaacctgacagtagcagagcacatc
atcttttattcccagctgaagggcaggtccagagaagaagctgaggaggaactgaaagtg
atgctggaagacataggccttgcccataaaagagacgaagaagttcagaacctttcaggt
ggcatgcagagaaaattgtcagttgccatggcgttcgttggaaaagcaaaagttgttgta
ttagatgagcccacctcaggagtggacccatactccagaagatccatttgggaccttttg
cttaagtatcgctcaggtaggaccatcatcctgtccacccatcacatggatgaggcagat
cttcttggagacagaattgctatactttcccaggggaaactgcattgctgtggttctccc
ttattcctaaagaactgctttggcactggcttctacttaactctggttcgcaggatgaag
aacatcaaagataccagaaaaaaggatgcaatctcctgtagctctgactgctcatgttcc
tgctccagctgctcatcaagaaatgaagatgaaactgtggagcaagaaatggatggggat
gtgagcgctctcactgaactaattcatcaccatgtccctgatgctaagttaattgaaagt
attggccaggaactcgtctaccttctgcccggcaaagatttcaagcatagggcctacgct
agcttcttccgagaattagaggagatgctgcctgacctggggctcagcagttttggaatt
tctgacacaccactggaggaaatattcctgaaggtcacagcagagagtggatctgagaca
gaaaattcaggaagtgttctggaaaatgtaccacattttctccttagaagaccatctgag
aatgctaccagcggttcctcaggactgccgattctcacagttcctgaccagcatgctcct
gggactgaaggcaaagggtctcgacaaattaaacattttgaacttctccatcagcagttc
agagcactaattatcaaaagattccaccattctgtccgaagtcagaaagacttcattgct
cagattgtgctaccccccagttttgtgttgctggctttgacatttaccaccattattcca
ccatttggagaatatcccagtttgacattgcatccttggatgtatggacagcaggtcaac
ttcttcagtaatgaacagcctgacagcaagcaagttgcctccctggccgaagctttcctg
aaaaagcctggatttggaactcgttgtatgaaggaaacacccctattccattacccctgc
agtggcacctcacatgactggacagtgcctcctgttcctccaagcatcaccaacatactt
ttgtcgcaagaatggacaccagacaatccctccccttcctgcacatgcagcagccagaat
aaactcatcatgcttccagaatgcccagagggagctgggggacacctcccaccacagagg
acgcaaccgagttcagaaattctgcaggatctcacaggaagaaacatttcagatttccta
gtgaaaacatatcctaaccttatcagaagcagcttgaagagcaagtactgggtcaacgag
cggaggtatggaggaatttcagtgggcggaagacttccagctctccaaatcactgctgaa
gaaattcttgaatttttcactcaacttggtcaaatattgaacatcactgggggacatact
acacggtccgtctctggagaaatgcagaacttccttaagtatctcgaaactgaagaaaat
attaaggtatggtttaacaacaagggctggcatgccatggtcagttttctaaatgtagcc
aacaatgccatactacgtgctagcttacagaaaggcaatgatcctgaggaatttggaatc
actacagagagccatccattgaacctcacgaagggccagctctctgaggtcactgtgctt
accacttcaattgatgtgatcgtcgctatctgtgtggtttttgccatgtcctttatccca
gccagttttgttctctatctgatccaggaaagagtgagcaaagctaagcaccttcagttt
gtcagtggagtcacccccactgtgtactggctgagcgtcttcatgtgggacattgtaagt
tacacagtgagtgctgttatcgtcgtgtgtatattcattggctttgggaaaagagcatac
acatccctgagcaacctgcctgcactcattgcattgctgcttctgtatggttgggccgta
accccgatgatgtaccccgcatcctacctgttctcagtgccgagcacagcctacgttgct
ctgtcctgcataaatctcttcattgggatcaacagcagtgcgatcacatttattctggac
ttgtttgaaaataatcggtctttgctgaaactcaatgaaggcctgaaagatgtgctcata
ctgtttccacatttctgcttgggtcgtggactcattgacttagcgatgaaccaagcagtg
actgacgtatatgctcgatttggtgaagaacatatctcacatccattccagtgggaattt
ctagggaaaaatttgacagctatggcagtggaaggggtggtatattttaccctgactctc
ctgattcagcatcgcttctttctcagcagatggtctgctgaccttcctaaagaaccagtc
gatggtgaggatgaagatgtggcccaagaacgacagcgtattctgaggggaggcggcaag
catgacatcatgcagctaaaggaactgaccaagatctattccgggagacagactccagca
gtggacaaactttgtgttggcgttcgtccgggagagtgttttggcctactgggagtaaat
ggtgctggtaagaccactacattcaaaatgctgactggggctactgctgtgacatctgga
gatgctaccgtagctggttacagtatattgacagcgattgctgatgtctatcagaaaatg
ggctactgtcctcagtttgatgccctcgatgacctcctcacaggtcgtgaacatcttcag
ctctatggacgcctgcgaggtatccccccaggggaaactgacaagatttcagactggggg
attgaaaagctgggtcttacaaaatatgcagaccatttaacgggtacatacagtggagga
aacaagcgtaaactctccactgctatctcgctgattggttgtccttcagtaatcttgctg
gatgaaccaacttcaggaatggaccctcagtcgcgccgtttcttatggaacgccattgtc
agtgttatcaaagagggcagagccgtggttttgacctcacaaagtatggaagaatgtgaa
gcactctgcacacgtctagctatcatggtgaagggatccttcaaatgcctgggcaccatt
cagcacctcaaatgcaaatttggagaaggttacgtagttacaatgaagataggagcatct
aaggcaggctgtcctccagacctcacaccggtggagaagttcatgcaggcaaactttgct
ggcagcctacagcgagagaagcactacaacatgttgcagtatcagatttcttcttcatcc
ctagccaggatctttcggctgctcctctctaaccgagaagatctgaacattgaggactac
tccgtctcgcagactactttagaccaagtgtttgtgaactttgctaaacatcagacagaa
gatgaaaccatcctcctacaccctcgggcagctggatctaaatggggggtgaaggtagcc
cctgcacaagcttcaaaggctgctgactaa
DBGET
integrated database retrieval system
