Geotrypetes seraphini (Gaboon caecilian): 117346818
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Entry
117346818 CDS
T09159
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117346818 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117346818 (GTF2B)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117346818 (GTF2B)
Prokaryotic type
Archaeal type
TFB
117346818 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
117346818
NCBI-ProteinID:
XP_033772833
UniProt:
A0A6P8PDA2
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Position
12:26874530..26932765
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AA seq
348 aa
AA seq
DB search
MTSSWSAEKKFGAFFQHLLQQSQSNSSMQRENFSTSTWVESLPKVICPSHPDAILVEDYR
AGDMICPECGLVVGDRVIDVGSEWRTFSNDKAAKDPSRVGDSQNPLLSGGDLTTMIGKGT
GAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQ
KSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDL
ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK
RTQKEIGDIAGVADVTIRQSYRLVYPRAPDLFPADFKFDTPVDKLPQL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcttggagtgccgagaaaaagtttggtgctttttttcagcacttgcttcag
caaagtcagtcaaacagcagcatgcagagagaaaatttcagcacttcaacatgggtggaa
tctcttccaaaagtaatatgtccaagccacccagatgctattttggtggaggattacaga
gctggtgatatgatctgtcctgaatgtggacttgtagtaggtgacagagtcatagatgta
ggttcagagtggagaacattcagcaatgacaaagctgccaaagacccatctcgagttgga
gactctcagaatcctctcttgagtggtggagatttgacgacgatgattggcaagggtact
ggagcagcaagctttgatgaatttggaaattcaaagtatcaaaaccgaaggaccatgagc
agctctgatcgtgcaatgatgaacgccttcaaagaaatcacaaatatggcagacagaata
aatcttcccagaaatatagttgatagaacaaataatttattcaaacaagtttatgaacag
aagagcctaaagggaaggagtaatgatgccattgcttctgcttgtctctacatagcatgt
agacaagaaggtgttcctagaacatttaaagaaatctgtgcagtatcgaggatatcgaag
aaggaaataggccggtgttttaaacttatcctgaaagctctggaaaccagtgtggatttg
attacaactggggactttatgtcacggttttgttcaaacctgggtcttcctaagcaagta
cagatggcagctacacacattgcgcgcaaagctgtggaattggacctagttcctggtcga
agtcctatctctgtagcagcagcagctatttacatggcatcacaagcttccgcagagaaa
cggacacaaaaggaaattggtgacatcgctggagttgctgatgttacaattagacagtcc
tacagacttgtttatccacgtgcaccagatctgtttcctgcagactttaagtttgacacg
cctgtggacaagctaccacagctgtaa
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