Geotrypetes seraphini (Gaboon caecilian): 117346835
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Entry
117346835 CDS
T09159
Symbol
SYDE2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117346835 (SYDE2)
Membrane trafficking [BR:
gsh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117346835 (SYDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
117346835
NCBI-ProteinID:
XP_033772873
UniProt:
A0A6P8PDE7
LinkDB
All DBs
Position
12:30735018..30845638
Genome browser
AA seq
1585 aa
AA seq
DB search
MADPLRRTLSKLRGKRSKCVAGVGSGEFAVQVAAGHSHQEGKEPMEEQRLQTERGWGKVA
TALWAESTDSSAHCMKGPHGKSAGVPPGPHITRSTEEALAGGSIGNRNLLREGHGKGDTS
PCLIKQQQVAMGDYGATEPRSSGILQAGESHCFLDNETLSPRLSAPGFFRRQAPAADSQS
PGCTLIPELSLPMSHISVQQTSEDVPASHHLGPYPNGLTLLQQCPTGSWQNARALVSELA
TAHPSHARHICATLKQTFREHLQSRYSLDSEEEDYYDNDNLPCYEHKFSTSQLQQLWGNL
EPAGVCSIPTAGSTGMSECAGSKKGSADSYQETDRLRTQLQEAYYLLIHAMHDMPIDSEP
SKSSSFTQISPSSCQSQDSVCTQSSVRATESDAWSSGEASPLQVSDTDSVTAKTLGGTKS
FSGMQVNSKSLDILCSRAADLCLHRSLSDSLIKYHALECQVLSEPDLQHSQSFSCQPCKG
ALDSHETNSAQAAELLVSWQHSDGSNVHQSYGNNEVLSDFGSTVNNFQDSADIVIVMCNK
ADSFSDGQGGSLKPPGVTVKKMQKWMYKGRLLSLEMKERIIGTSQKDNGTYCSLAAQARS
REGNLETNSAAPAEVQGGSKVLQSASGDRVMLTDFIENVYASSLIKQEFRVSEANEVNEK
GLQKNSITVSKKRKWFQQSTQRSPFQEENQTSVRNLDEIFQVPKSSSPRRGRLPAPMKLP
VGHIDVIAQSSTVKIHSPSASLSPLGNCVFDINEENDADDEGEIWYNPIPEEDEPCLEGI
CPLNSDSRAFGLQKKVCDCVRTRVPGPTGGLPYSSECVGAVQTALSSEINDVHSLHSTDY
SMQLHKWRFACKTPIGKTAEEKPLCRSCETGPGGLSTDLVESGAEFSPPSSPNPLKKGGP
MNWSFPDKIKSPRTVRKLSIKMKKLPELSRKLSIKGATSHISSEHPSPLLKDNCQDTVHM
PSLLSSGGRTAAAASRNVISRYHLDSSVSSQHNCKKKSIGNSKSSSKGGYLSDGDSPELI
TKSGKHGSANRSVKGKEALLSNNIKTEIDIDAFRHYSFLDQPKCSQYVSGLMSVHFYGAE
DLKPPRMDSKEVFCAIQVDSINKARTALLNCRTSFLDMDHTFNIELENAQHLKLAVFSWE
PTPRRNRVCCHGTVVLPTLFRVTRTHRLAVKLEPRGIIYVKLTLMEQWENSHDALDLDRE
PVVFGVEARKVVEKENVGLMVPLLMQKCIVEIEKRGCQVVGLYRLCGSAAVKKELREAFE
RDSKAVNLCENLYPDINVITGVLKDYLRELPSPLITKQLYEAVLNSMVKKPLKRTANSCE
NDTSDSEFTVGLLDCLPDVEKATLKMLLDHLKLVASYHEVNKMTSQNLAVCFGPVLLSQR
QETSGHNKRVFTDSEELASALDFKKHIEVLHYLLQLWPVQNSTAKDLSRHRDSPEMQPSL
NYLRRKKQRPQMLNLNNTEISGVLRPRQARLDSPSSNRYAGDWSGCGENYFSTTKESVNE
ADYDDVPSEDAESGEDCSRADGSDNVIKNSKSIAKEHSFKAYVKMQAIDTTVEHRVNLKD
LQESIDTLIGNLERELNKNKLNISY
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctctgaggaggactttatccaagctccggggcaagaggtccaagtgtgtg
gcaggggtaggatctggggaatttgcagtccaggttgctgcaggacacagtcatcaggaa
ggtaaagagcctatggaggagcagcggcttcagacagaaagaggctggggaaaggttgca
actgccctttgggctgagagcactgactcctcagcacattgcatgaagggtccccatggg
aagagtgcaggtgtgccacctggcccccacattacgcgaagtactgaggaggcgctagca
gggggctccattgggaacagaaacttattgagagaggggcacgggaaaggtgatacatca
ccatgcctcatcaagcagcagcaggtggctatgggagactatggtgccactgaacccagg
agctctgggatcctgcaggcaggtgaaagtcactgtttcttagacaatgaaacactctcc
cctaggttaagcgctcctggtttttttaggagacaggcacctgctgcagactctcagagt
cctggatgcacactcatacccgaattgtctttacccatgagccatatttcagtgcagcaa
acttcagaggacgtgcctgcatcacaccacttgggcccatacccaaatggcctgaccctc
ttacagcagtgtcccacgggaagctggcagaatgccagggctctagtgtctgagctggcc
acagctcatcccagccatgcccgccatatctgtgcaacactaaaacaaacctttagggaa
catcttcagagtcgctattctctagacagtgaggaggaggattactatgacaatgacaac
cttccctgttatgagcacaagttttccacctctcagcttcagcagctgtggggaaacctg
gagccagcaggtgtctgctcaatacccacagctggtagcactgggatgtctgagtgtgca
ggcagtaagaagggcagtgctgatagttaccaggagacagaccggttgaggactcagtta
caagaggcctattatttgcttattcatgccatgcatgatatgcccattgatagcgaacca
agtaagagcagtagtttcacacaaatcagcccttccagctgccagtctcaggacagcgtt
tgtacccagtcatctgttagggccacagaaagtgatgcttggtcgtcgggtgaagccagt
cccctgcaggtgtctgatacagattcagtgactgcaaagactttgggaggcaccaagagt
ttctctgggatgcaggttaatagcaaaagcttggacatcctctgtagcagagctgcagat
ttgtgtctgcacaggtcacttagtgatagcctgatcaaataccatgcattagagtgccaa
gtcctctcggagccggatctgcaacacagccagagcttttcttgtcaaccttgtaaaggt
gctttggacagccacgagacgaacagtgctcaagcggctgagctgttggttagttggcaa
cattcagacggcagtaatgttcatcaatcatatgggaacaatgaagtgttaagtgacttt
ggctccacggtgaacaattttcaagattcagcagacattgtcatagtaatgtgcaacaaa
gcagatagctttagcgatggccaaggaggttcactgaagccaccgggggtgacagtcaag
aagatgcaaaaatggatgtacaaaggacgcctgctgtctttggaaatgaaggagcgcatt
attggaacttcacagaaagacaatggaacttactgttcgctagcagctcaggccaggagc
agagaagggaatctggaaacaaattcagctgctcctgcagaggtacaaggtgggagcaaa
gtgctgcagtctgcatccggtgacagagttatgctgacagatttcattgaaaatgtctat
gcctcttctctaatcaaacaagagtttagagtgtctgaagctaatgaagtcaatgagaag
gggctgcaaaagaacagtatcacagtatccaaaaaacgcaaatggttccagcagagtacc
cagaggtccccatttcaagaagaaaaccaaactagtgtgaggaatctagacgagattttc
caggtacccaaatcatccagtccgagacgtggaaggcttccagctcccatgaagctccct
gttggacacatcgatgtcatagctcagagcagcactgtaaaaattcactctccctctgcc
agcctgtcccccttaggaaactgtgtatttgatatcaatgaagaaaatgatgcagatgat
gaaggagaaatctggtacaatcccatccctgaagaggatgaaccctgtcttgaagggatt
tgtcctctgaattctgactctcgtgcctttggtttacagaagaaggtgtgtgattgtgtt
aggactagagtgcccgggcctactggaggtcttccatattcttcagaatgtgtgggggct
gtgcagacggctctttccagtgagattaatgatgtgcattccttacattccaccgactac
tctatgcagctgcataagtggaggtttgcatgcaagactccgatagggaagactgcagag
gagaaacctttgtgcagatcttgtgaaacaggtcctggaggtctgtctacagacctggtg
gaatcgggagctgaattttctcctccatcaagtccaaaccctttgaaaaaaggagggcca
atgaattggtcctttcctgataaaatcaaatctccccgaactgtcagaaaactctctata
aaaatgaaaaagctgccagaacttagcaggaagctgagcattaagggagctacaagccat
attagctcggagcacccgtctcccttgctgaaggataactgtcaggatacagtccacatg
ccctccttgctttcttctggaggtagaactgctgctgctgctagccgaaatgtgatcagt
cggtaccatcttgacagcagcgtctcatcgcagcacaattgtaagaagaaaagtataggg
aattccaagtcttccagcaaaggtggttacctcagtgatggtgactccccggagctgatt
actaaatcgggtaaacatgggtctgcaaacagatccgtgaagggaaaggaagcacttcta
agcaataacattaaaactgaaatagacattgatgcatttcgacactacagttttttagat
caacccaaatgttcgcaatacgtatcggggctcatgagtgtccacttctatggggcggaa
gatctaaaaccgcccaggatggactctaaagaggtcttttgtgcgattcaggttgattcg
atcaataaagccagaacagccttgcttaattgcagaacaagcttccttgacatggaccac
actttcaatatagaacttgaaaatgcacagcatttgaagttggcagtattcagctgggag
ccaacgcctcgtagaaatcgggtttgctgccatggtacagttgtgctccctacccttttt
agagtaacaaggacacatcgtctggctgtgaaactggagcctcggggaattatttatgtc
aagctgactctcatggagcaatgggaaaactctcatgatgctttagatctggatcgggaa
ccagtggtatttggggtagaagcccgaaaagtggttgagaaggaaaatgtgggcttaatg
gtgccactgctaatgcagaaatgcattgtagaaattgagaaaagaggctgtcaggttgtt
ggcctgtaccgattatgtggctcagctgcagtgaagaaagagcttcgtgaagcatttgag
agagacagcaaggcagtcaacctgtgtgaaaacttgtatccagatataaatgtgattaca
ggtgttctgaaggattatttaagagaattaccctcccctttgattacaaaacagctgtat
gaagcagtgttaaacagcatggttaaaaaacctttaaaaaggactgcaaatagctgtgaa
aatgacacgagtgattcagagttcaccgttgggcttctagattgtttgccggatgtggag
aaggccactttgaagatgctgttggatcacctgaagttggtagcatcttaccatgaagta
aataagatgaccagccagaatttagctgtctgctttgggcctgtactgctgagccagagg
caggagacttctgggcacaacaagagagtttttacggattctgaagagctcgctagtgcc
ctagactttaaaaaacacatcgaggtgctccattatttgctgcagttatggccagtgcaa
aattctactgccaaagatttgtctcgacaccgtgactccccagagatgcagccatctttg
aattatctgagaaggaagaagcaacgacctcaaatgttgaacttgaacaatacagaaatt
tctggtgttcttaggccaaggcaggctcgactggacagtccctcaagtaatcgctatgca
ggagactggagcggctgtggggaaaactatttctcaacaacaaaagagagtgtgaatgag
gcagactatgatgatgttccatcagaagatgcagaaagtggagaagactgcagcagagcg
gacggatcagataatgtcattaaaaactcgaaatccatagccaaagagcattcattcaag
gcctacgtgaaaatgcaagcaatagatacaacagtagaacacagagtaaacctcaaagat
ctacaagaaagcattgatactctgattgggaacttggagagagaactcaacaaaaacaaa
ttaaacattagctattaa
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integrated database retrieval system
