Geotrypetes seraphini (Gaboon caecilian): 117347093
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Entry
117347093 CDS
T09159
Symbol
FRMPD1
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117347093 (FRMPD1)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Other domain-containing proteins
FERM domain-containing proteins
117347093 (FRMPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
FERM_C_FAK1
PDZ_6
FERM_f0
DUF6288
FERM_N
Motif
Other DBs
NCBI-GeneID:
117347093
NCBI-ProteinID:
XP_033773381
UniProt:
A0A6P8PCW3
LinkDB
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Position
1:392600696..392905142
Genome browser
AA seq
1603 aa
AA seq
DB search
MEEREANLLQTRRVHKIEQMVARWLHRSRDSSHRSRTSVANGSSGIQNQLSAPMKLTLTV
SKDLLLNSYGFDISQNLPLTITSVAAGSPAEGKLLPGDQILRISNEVLEDASVEQAIDII
RKSENSISITVLRYILGPKSSFLTAEKRARLKSNPVKVRFAEEVIVNGHAQGNSLLFMPN
VLKVYLENGQTKAFKFEAKTTVKDILHTLKEKLSIQSIQHFALALEEQYNISKLYLLHEE
ELIEQVVQKRESHDYRCLFRVCFVPRDPWDLLQEDPIAFEYLYLQSCSDVLQERFAVEMK
CSMALRLAALHIQERILTCTQPQKMSFKYIEKDWGIENFISPTLLRNMRGKDIKKAISFH
MKRNQLLLEPRQKQFSSAAHVRASYLRLLGELKTYGGKIFNATLLLQDRELYIALLVGAK
YGVSQIVNNKLNIMTTLAEFSNISRVELSAESEKVSMMKVYLQDVKPLSLLLESNNAKDL
ACLIAGYYKLFVNPGIYVFSPNGQPQGHRFSAEEGYESRGCSDSEESSEIDSSLDISSDM
HLLKYNIKTLHEEEEGKLDEIDQDCKNPGDYNREKCYSITKGTDSTSEASDSANTEGRSC
MISWSSDSMDALEEDDLEACSSSRPEFFHFYVPSLDEIHSEDKSVFYSEGEEEQKENEKA
GSDPFLCFLQTSQRDESGTEQKDFSGCPGDMEPKEENELSAFSLGCRLYDSNVMEYYSLC
SNVSPANSLDKDSSPDKNYFNSLLIDSEEEKKCNVIETSEVETLILDPPPGFGDSSSEEE
FFDAADRLTPTETVSGSKAVSMEYANKFSYLNDSHCFNSIDNYMLRQNKQEQGRGKETES
PAKSLRKRRSFLQTNYTSQVTFPISPSCSLVTIDHVCCYEREPCLSSLSYSPTISSLQGP
EGELGLLETKPLAHSTDWKETQNKNSTSNLMEMEPDTMETKSVADAAGHSVTAVGVTGQQ
ETKPTSYFEAGVNAKKHPFNPLCLSDQEERSCHSEVTSWLEGITSNVQKGQIEVNRRNIS
QYNLTLCETDNSVKSIVKHEQNSRENITCNVKTQGRAEFCNALDNVSQAEILSPCVEMSF
VPVTQGRNRQLVYSEAASSISESKWHEQRVTSNELENTEYIQCIIDKEDKALFQERGCKT
LEDGSSREADIKKCSGFSNSELHFDVSNISGILTCCSMMSALKENQSHTASYFNGQQTGS
VHRGGEPLLGSTDSDALVLDDILPEVGNQYLPITSESLQKTYNPPETHNSQIVKDTASLH
LEFSDDQIWLHTTPLSTHERTLQRSQQPLLELLYRFFHQNNISGAAREDPSIHSKQSLFC
FNHNRDKNSPASNSVDSSLGFTSIKTVTVPKEKVEKCSCHLSYATCFRGLDMETDGENVN
SEENISLSLPMTVPPSSVSLSSIKLSPFSLHNPNKNMNSELQANESVISLECYFKALSQL
QDRIFNLPPDFKQLQDNIQELKKIIEEFSGNGLKHLQDKCALQFSEEKYALCAESRKLIS
SCQKVISKIQSPELMQDAVQETFQNLLQLTRVCFQFTDCDCCISRKIEVLSDLKTVVCTY
NEFVQAARKTCGKGCQDLSFEFLSGQCTALSAAVFCLTQQFRT
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgggaggctaatttattgcaaacccgcagagtgcataaaatagaacaaatg
gtagcaagatggctccatcgatcaagagatagttcacaccgtagtagaacttcagtggca
aatggttcatctggtattcaaaatcaactcagtgctcctatgaaactgactctaacagta
agcaaagatcttcttctcaacagctacggctttgatatttcccaaaatcttccccttacg
atcacatcagtggctgcaggcagcccagctgaaggaaaactcttgccaggtgatcaaatc
ctcaggataagcaatgaagtgttagaagatgcttctgttgaacaagcaattgatataata
aggaaatcagaaaactctatctccattactgtcttgcgatacatcttgggtcctaaatcc
tcttttctgacggcagagaagagggccaggctgaaatcaaatcctgtgaaagtgcgcttt
gccgaggaagtgatagtaaacgggcatgctcagggaaattcactattattcatgcccaat
gttctcaaggtgtacttggaaaatggacagaccaaagctttcaaatttgaggcaaagaca
accgtgaaggatattcttcatacactgaaagaaaaactctccattcagagtattcagcac
tttgctttagctttggaagaacaatacaacatctctaagctatatctcctgcatgaagaa
gagctcattgaacaggtagtacagaaaagagagtctcacgactacaggtgcctctttcgt
gtctgttttgtaccaagggatccttgggatcttttgcaagaagatccaatagcttttgaa
tatctctacttgcagagctgcagcgatgtcctccaggaaagatttgcagtagagatgaag
tgcagtatggcattacgactagcagcactgcacattcaggaaaggattctcacctgcaca
cagccacaaaaaatgtccttcaaatacattgaaaaggactggggaatagaaaactttatt
tctccaactttgctgcgaaatatgagaggcaaagacattaaaaaagccattagcttccac
atgaagaggaatcaactcttgctggagccaaggcagaagcaattcagttccgcagcacat
gtgcgtgccagttatctaaggcttcttggagaacttaaaacttatggtgggaagatcttt
aatgcaactctgctgttacaggacagggagttatatattgccttgttagtcggagccaag
tatggagttagtcagattgtcaacaacaaactgaacatcatgaccactctggcagagttc
tcaaacatcagcagagtagagctgagtgcggaatcagagaaagtgagcatgatgaaggtt
tatctgcaggatgtgaagccactttctcttctgctagaatctaacaatgctaaagacctt
gcctgtcttattgctggctattacaagctgtttgtgaatccaggcatctatgtgttctca
ccaaatgggcaaccacagggacaccgtttttcagctgaagaaggttatgaatctcgagga
tgtagtgactctgaagagtcctctgaaatagactcttcactggacatttcttcagatatg
catctgctgaagtacaacataaagactttgcatgaagaggaggagggaaaactggatgaa
attgatcaagactgtaaaaacccaggagattataatagagagaaatgctacagcatcacc
aaagggaccgacagcacctctgaggcctccgattctgctaatacagaaggcagaagctgt
atgatcagctggtccagtgattctatggatgctttggaagaggatgacctggaagcatgt
tcttcaagtagacctgagtttttccacttttatgtacccagtttagatgaaatccatagt
gaagacaaaagtgttttctatagtgaaggtgaagaagagcaaaaagaaaatgaaaaggca
ggctctgatccctttctgtgtttcctgcagacatcacagagagatgagagtggaactgaa
caaaaagatttttccgggtgtccaggggacatggaaccaaaggaggaaaatgaactgagt
gcttttagtctgggctgtcgactgtatgatagcaatgtcatggaatattatagcctgtgt
tcaaatgtttcccctgcaaacagcctggataaagacagtagcccagataaaaattatttc
aatagtcttctaatagattcagaagaggagaagaagtgtaatgtgattgagaccagtgag
gtggaaacactcattctggaccctccccctggttttggggacagcagctcagaggaggaa
ttctttgatgcagcagataggctcacaccaactgaaacagtatcaggttctaaggctgtc
tctatggagtatgcaaataaattctcttatctaaatgattcccactgctttaattctata
gacaattacatgctaaggcaaaacaaacaagaacaaggaagaggaaaagaaacagaaagt
cctgcaaagagcctaagaaaacgaagatctttcttacagacaaattacacctcacaggtt
acatttcccatttcaccctcctgctccttagttaccattgatcatgtatgctgttatgaa
agagagccctgcttgtcctcactctcttattctccaaccatttcttccctgcaaggccct
gaaggagaacttggactcctggaaaccaaaccacttgcccactccacagactggaaagaa
acccaaaataaaaactctacctccaacttgatggaaatggagcccgacaccatggaaact
aaatcagtggccgatgctgctggccattcagttacagctgtcggtgtcacaggtcaacag
gaaactaaaccaacctcttattttgaagctggtgtaaatgccaagaaacatcctttcaat
cctctgtgtctgtcagaccaagaggagagaagttgtcactctgaagtaacttcttggttg
gaaggcatcacttcaaatgttcagaaaggacagattgaagtaaataggaggaatatttct
caatacaatcttacactttgtgaaactgataactccgtgaaaagtatagtaaaacatgaa
cagaacagtagagaaaatataacatgtaatgtgaaaacacaagggagagcagagttctgt
aatgcacttgataatgtaagccaggcagagattttaagcccttgtgttgaaatgtctttt
gttccagtgactcagggtagaaatagacagctagtgtattcagaagcagcttcctctata
tctgagagcaaatggcatgagcaaagagtgacttccaatgaattagaaaacacagaatac
atacaatgtattatagacaaagaagataaagctttatttcaagagagaggctgcaagacc
ttagaagatggatcttctagagaggctgatattaagaaatgctctggtttctctaattca
gagttgcattttgacgtaagcaatatttctggcatacttacttgctgttccatgatgtcc
gcacttaaagaaaatcaaagtcatacagcatcatattttaacggtcagcaaacaggttca
gtgcatagaggtggagagcctctcttgggaagcactgactctgatgccctggttttggat
gacattctacctgaagttggtaaccagtatttgcccataacctcggaatctcttcagaaa
acatataatcctccagagactcataatagccaaattgtaaaggatacagcttcactgcac
ttagagtttagtgatgaccagatttggttacacactactcctctgtcaacacatgaaagg
acactacagagaagtcagcagcctctcttggaactattatatcgttttttccaccaaaat
aatatttcaggagctgcaagagaagatccttcaattcattctaaacagtcactcttctgc
ttcaatcataatagagacaaaaatagccctgcaagtaacagtgtggacagctctttgggt
tttacaagcattaagacagtaacggtcccaaaagagaaagtggagaaatgcagttgtcat
ttgtcttatgctacctgtttccgtggccttgatatggagacagatggtgaaaatgttaat
tctgaagaaaatatatcactgtcactaccaatgacagttcctccttcttcagtaagttta
tcatctattaaattgagccctttcagcttgcacaatcccaacaaaaatatgaactctgaa
ttgcaggcaaatgaaagtgttattagtctagaatgctacttcaaagctctgagtcagtta
caagatagaatatttaacctgccacctgattttaagcagttacaagataatatacaagag
ttaaaaaaaattatagaggaattttcaggcaatggattgaaacatctccaggacaaatgt
gcattgcaattttctgaagagaaatatgcactctgcgctgaatctcgaaagctgatatcc
agttgtcagaaagttatcagcaagattcagtcccctgaactgatgcaagatgcagttcag
gagaccttccagaacttgctccagctgactagggtatgcttccagttcacagactgtgac
tgctgcataagcaggaagattgaggttctctcagacctcaaaactgttgtttgcacctac
aatgaatttgtacaggctgccagaaagacttgtgggaaaggctgccaggatctaagcttt
gagtttttgtcaggtcagtgcactgctctcagtgctgcagtgttctgcttgacacagcaa
ttcaggacatga
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