Geotrypetes seraphini (Gaboon caecilian): 117347218
Help
Entry
117347218 CDS
T09159
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04270
Vascular smooth muscle contraction
gsh04625
C-type lectin receptor signaling pathway
gsh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117347218 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117347218 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
117347218 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117347218 (ARHGEF12)
Membrane trafficking [BR:
gsh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117347218 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
117347218
NCBI-ProteinID:
XP_033773718
UniProt:
A0A6P8PG85
LinkDB
All DBs
Position
13:22195953..22357370
Genome browser
AA seq
1511 aa
AA seq
DB search
MSGIQSAVTDRFPLKKPTRHASILNRESPTDKKQKVERCSSGSHDFDPADSTSRKTKSSW
DESRHETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVN
GTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPHIPLAENEGDSVTFVQNLSPVATSPR
SPGASGNVERITSPVLMGEENNIVHNQKVEILRKMLQKEQEQQQSLLEEYSQASSTRLLK
EIQESKKHLHQLQVQLCKATGLSQDDILLLKLPSEVLRISELEAESGDGLGKTDLSSGDT
SRPDNEIADSPQSGLKEKSHLDESLEKSELQDTDLQLGVGIPTVRLGNHIIGAEDDDFDA
EQEQINGQCNCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYADLYKQTNSKETRR
VFLEFNQLFLDRAANLKVLVPDDVALDLEKRRPELIPEELHRHYIQTMQEKVYLDVHRHL
EDFRQKRSMGLTLAEAELARLDAERVRDQTTLEKERQSAEHIISKIEEVLMTSQPLEEEK
SSTMQYVILTYMKHLGVKVKEPRNLEQKRGRIGLLPKIKQSIKKEKENDEKVKRRVFPSI
LVPPRRPSRHDSSAIGRAMEMNKQRHPKHLSTSSSSPEPADLGKMRQSESSDFNPISPPN
SGIYSSPEGSKDEIGLKQTEVLSSSDSCDSTPRTSGTMFDFPSPPLEHLHEDEREFERLA
DLGTPKLFRKLDSVGFGDIQSEDELYDFDVETDPPSWQQLVGREVLRGLKPHEIKQQEVI
HELFYTERAHVRKLTVLDQVFYQRISREGILPISDIRSIFSNLDEILMLHVGLNEQMRSV
RKRNETSVIDQIGEDLLTWFNVEGEEKLKQATAIFCSNQSFALEMIKSRQKKDSRFLSFM
QDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYSDRPEEKEKVKKAADCCRQILN
HVNQAVKEAENKQRLEDYQRRLDLSYLKQAEDPMLDEFRNLDLTKRKMVHEGPLTWKVNR
DKTIDLYTLLLEDILVLLQKQDDKLVLRCHSKILASSADSRHIFSPIIKLNTVLVRQVAT
DNKALFVISMSENGAQIYELVAQTVSEKNMWQDLIAQMAGTDKVVTKRVIPLPQVDEQEE
EDQQKLKDELQDIPSYGLQSSDKDLDMDSHMVMKSLSPSPTTSEKPEVADLEQEAWSQSS
FEQEQQTLDALKEGELPHSISQQQWAIDALRNLSALRHLLVQHLGLPEGGARKDWQLLPA
CRTLFHRPYIDSALKHLNNSVQNQQETDRIPPTTKEPAASFGVQTLSEGMKLQTGGPKRS
SCSKDPPTGSLETPTVDLDSGAEEGGDQFFDARDAYSDDNPSESEGTDRKDEEVTLLRIS
GNYLILDGYEMLQESSTDDELSSSVTQCTTSSPLTDCFLQNLDLPGNIQDDAGIAPSAVE
LLGQHSQMGAEGPWSSPKIIPFTSASSSQILQYIQTIETDLEHLKGIEDSYHTLCQRMAG
SALLDEASDKS
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcatacagtctgcagtcacggacaggtttcctctcaaaaaaccaaccaggcat
gccagcatcctaaatcgtgagtctccaacagataaaaaacagaaggtggaacgctgcagc
agtggctcacatgactttgatcctgcagatagtacatcaaggaagacaaaatctagttgg
gatgagagtagacacgagacgtatggactggttcagcggtgtgtgattatccagcgagat
gagaatgggtttggactgacagtcagtggtgacaatcctgtctttgtgcaatcagtgaaa
gaagatggagcagcaatgcgggctggggtgcaaacaggagacaggatcatcaaggtgaat
ggaactcttgtgactcactccaaccatctggaggtggttaagctaattaaatctgggtct
tatgtagctcttacagtgcaagggcgtcctcctgggtcaccccatataccactggctgaa
aatgagggagattctgttacatttgtacagaatttgtctcctgtcgccacatctcctcgt
tcacctggagcatctggaaatgtagaaaggatcaccagccctgtgctgatgggggaggaa
aataatattgtccacaaccagaaggtagagatcttaagaaagatgctgcaaaaggagcaa
gaacagcagcagtccttgctggaagaatacagccaagcctcgtccacgcgactccttaag
gaaattcaagaatcaaagaaacacctccatcagcttcaagtgcagctctgcaaagccaca
ggcctttctcaggatgacattttgctcctgaagttgccatcggaggtgctgcggataagc
gaacttgaggcagagagtggggatggactaggaaagactgacttgagcagtggcgataca
tcccgaccagacaacgagatagctgatagtccacagagtggtctgaaggagaagagtcat
ttggatgaaagtctagagaaaagtgaacttcaggatacagacttgcagcttggtgtcgga
atccccactgtgcgtctgggaaaccacatcattggagcggaagatgatgactttgatgct
gagcaagagcagattaatgggcaatgcaactgttttcaaagcattgaactactgaaatct
cgcccggctcacttggcagtatttttgcatcatgtggtctcacagtttgacccagcaaca
ctgctctgctatctttatgcagatttgtacaaacagaccaactcaaaggaaacacgtcga
gtctttcttgagttcaatcaacttttcctcgaccgagcagcgaatctgaaggttttggtt
ccagatgatgttgcattggatctagagaaaagacggccggaactaattccagaggagctt
catcgtcattacatccagaccatgcaagagaaagtttatctcgatgtgcatcgacaccta
gaggatttcagacagaagcgcagcatgggactgactttagcagaagctgaactggccaga
ctggatgctgagcgtgttcgtgatcagaccactctggagaaggaacgacagagcgctgag
cacattatcagcaaaatagaggaagtgctgatgacatctcagcccctggaggaggaaaaa
agttcaacaatgcagtatgtgatcctgacctacatgaaacatctgggtgtaaaagtgaaa
gaaccacgtaatttggagcagaagcgtggccggatcgggttactacccaagatcaagcaa
agtattaagaaagagaaggagaatgatgagaaggtgaagagaagagtctttcccagtatt
ctagtgcctcctaggagaccaagccgccatgacagcagtgcaatcggcagagctatggaa
atgaataagcagcgtcacccaaagcacttatctacatcatccagcagccctgagcctgct
gatttaggaaagatgcgccagagtgagagttccgatttcaatcccatctctcccccaaat
tcagggatctacagctccccagagggaagcaaggatgagatcggtctgaagcagaccgaa
gtgttgtcctcttccgattcttgtgatagcacaccgcgcacatcaggcactatgtttgat
tttccttctcctccactggaacatttgcatgaagatgaaagagaatttgagagattagct
gacctgggtacaccaaaattattcagaaagctggacagtgtgggatttggggatattcag
agtgaggatgagctgtatgactttgacgtggaaacagatcctcccagttggcagcagctc
gtgggtcgagaagttctgcggggtctgaaaccacatgagataaaacaacaagaagtcatt
catgaattgttctacacagaacgtgctcatgtacgcaagttaactgtcctggatcaggtg
ttctaccagcgcatctcccgagaaggtattctaccaatttctgacatacgcagcatcttc
tcaaacctagacgaaatactaatgctccatgtgggattgaatgaacagatgaggtctgtc
cgtaaacgaaacgagacatcggttattgatcaaattggggaggatctacttacctggttt
aatgtagaaggagaagagaagcttaaacaggccactgctatcttctgcagtaaccagtca
tttgctctagagatgattaagtctcgtcaaaagaaagattctcgttttctgtccttcatg
caggatgcagagagtaatcctctgtgccgacgattgcagttgaaggatatcattcctacg
gagatgcaaaggcttactaaatatcctttgctgctagataacatcgcaaagtactcagac
cggcctgaagagaaggagaaggtaaagaaagcagccgattgctgtcgacagatcctaaac
catgtaaaccaggctgtgaaagaggcagaaaataaacagcggctagaagattatcagcgc
cggcttgacttatcctatctgaaacaggcggaggatccaatgcttgatgaattcaggaat
ctagatttaacaaagaggaagatggttcacgaaggacctttgacctggaaggtaaatcgg
gataaaaccattgatctatacacccttctgctggaggacattttggttcttctgcagaaa
caggatgataagcttgtgttaagatgccacagtaaaattctggcatccagtgctgacagc
aggcacatcttcagccccatcatcaaactgaacacagtgttggtacgccaggttgcaaca
gataacaaggctttgtttgtgatctccatgtcagaaaatggtgcacagatttatgaactg
gtagcacaaacagtttcagaaaagaatatgtggcaggacctcatagcacaaatggcaggg
acagataaagttgttaccaagagagtgatcccattaccacaggtagatgagcaggaagaa
gaggatcagcagaaattaaaagatgaactgcaagatattccttcctatgggctgcagagt
tcagataaagatttggacatggattcccatatggttatgaaatccctgtctccatcaccc
accacatctgagaagccagaagtggctgatcttgaacaagaagcttggtcacagagttca
tttgagcaggagcaacaaactttagatgctctgaaagagggagaacttccacattccatc
tctcaacaacagtgggcaatagatgcactaaggaacttgagcgctttaaggcatttgctg
gttcagcacctgggcttgcctgaagggggagcccgtaaggactggcagcttcttcctgcc
tgtagaacactttttcatagaccctatattgacagtgctttgaagcatttgaacaatagt
gtacaaaatcagcaggaaactgacaggattccccctactacaaaggaacctgcagctagt
tttggtgtgcagactctgtcagaaggaatgaaactacaaactggagggcccaagagaagc
agttgctcaaaagatccaccaactgggagccttgaaactcccactgtagacttggatagt
ggtgctgaagagggtggtgaccagttctttgatgctcgagacgcctacagcgatgacaac
ccatcagagagtgagggaacagataggaaagacgaagaggtgacactgttacggatctca
ggaaactatttgatccttgatgggtatgagatgctgcaggagagttccactgatgacgag
ctctcttcctccgttacacaatgcactacaagcagccccttaacagactgtttcctccaa
aacctggatttgcctggaaatattcaagatgatgcaggcatcgccccaagtgcagtagaa
ttgctggggcagcacagccagatgggggcagaaggtccttggtccagtccaaaaataata
cccttcacttcagcatcttctagccagatactgcagtacattcaaacgatagagacagat
cttgaacacttaaaggggatagaggacagttaccatacgctttgccagaggatggctgga
tctgcacttctagatgaagcttcagataaaagttaa
DBGET
integrated database retrieval system
