Geotrypetes seraphini (Gaboon caecilian): 117347244
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Entry
117347244 CDS
T09159
Symbol
THRA
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04080
Neuroactive ligand-receptor interaction
gsh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117347244 (THRA)
04081 Hormone signaling
117347244 (THRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117347244 (THRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gsh03310
]
117347244 (THRA)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117347244 (THRA)
Nuclear receptors [BR:
gsh03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117347244 (THRA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117347244
NCBI-ProteinID:
XP_033773797
UniProt:
A0A6P8NDA7
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Position
13:65198228..65466459
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AA seq
408 aa
AA seq
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MEQKSSDLDCLSEPEDKRWLDGKRKRKSSQCSLKTSMSGYIPSYLEKDEPCVVCSDKATG
YHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMAM
DLVLDDSKRVAKRKLIEDNRERRRKEEMIKTLQHRPEPSNEEWELIQIVTEAHRSTNAQG
SHWKQKRKFLPEDIGQSPVAPMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSEL
PCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDL
GKSLSAFNLDDTEVALLQAVLLMSSDRTGLICIDKIEKCQETYLLAFEHYINHRKHAIAH
FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEEQDV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaatccagtgacctggactgcttgtcagagcctgaggacaaaaggtggctg
gatggaaaaaggaagagaaaaagcagccaatgttcgctgaagaccagcatgtcagggtat
atccctagctaccttgaaaaagatgaaccatgtgttgtgtgcagtgacaaagcaactggc
taccattaccgctgcatcacctgtgaggggtgtaagggttttttccgaaggacaatccag
aagaatctacacccgtcctactcctgcaagtacgatggctgctgcatcattgacaagatc
acacgcaaccagtgccagctgtgccgcttcaagaaatgcatcgctgtgggcatggccatg
gaccttgttctggatgactccaaacgggtagccaagcggaaactgatcgaggataaccga
gagcggcggcgtaaagaagagatgatcaaaacactgcagcatcggccagaaccaagcaat
gaggaatgggagctgatccaaatcgtcacagaagcccatcgtagcaccaatgcgcagggc
agccactggaagcagaagcggaaattcctaccagaagatattggccagtcgcctgtggct
cccatgccagatggagacaaggtggatctagaagcattcagcgagtttacaaaaataatc
accccagctatcacccgggtggtggactttgccaaaaaattaccaatgttttctgagctg
ccttgtgaagatcagatcattcttctgaaaggctgttgcatggaaatcatgtccctacgt
gcagcagtcaggtacgaccccgagagcgagacgttaacactaagtggagagatggctgtg
aagcgggagcagctgaagaacggagggcttggcgtggtgtctgatgctatctttgacctg
ggcaagtcactctctgcttttaatctggatgatacagaggtggctctgctgcaggcagtc
ctgcttatgtcttcagatcgaacaggcctgatctgtatcgataaaatcgagaaatgccaa
gagacttacctgctggccttcgaacactacatcaaccaccgcaagcatgctattgcccac
ttttggcccaagctgctgatgaaggtgacagacctgcgcatgatcggggcctgccacgcc
agccgtttcttgcacatgaaggtcgaatgtcccactgaactatttcccccgctcttcctg
gaggtcttcgaggagcaagacgtctga
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