Geotrypetes seraphini (Gaboon caecilian): 117347281
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Entry
117347281 CDS
T09159
Symbol
TAF11
Name
(RefSeq) transcription initiation factor TFIID subunit 11 isoform X1
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117347281 (TAF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117347281 (TAF11)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117347281 (TAF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
SR-25
GMT-wHTH
Hjc
Motif
Other DBs
NCBI-GeneID:
117347281
NCBI-ProteinID:
XP_033773875
UniProt:
A0A6P8NYJ9
LinkDB
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Position
13:complement(18098956..18117541)
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AA seq
275 aa
AA seq
DB search
MAVGNNFVFFVSFEKCVFMVEEEIHLYFSVLHCRVWSSVTSELRMEEAEEQSNEKGGDPV
PAQEPPAADLDSASTADVEDTPLASTEEGACKTTVDSKMDTEEEEKEKVKEQEASESSSS
LVVATAAATTERAERDDGALQSSQAKKMKIEVKEKKEKKQKVDEDEIQKMQILVSSFSEE
QLNRYEMYRRSAFPKAAIKRLIQSITGCSISQNVVIAMSGIAKVFVGEVVEEALDVCEKW
GESPPLQPKHMREAVRRLKSRGQIPNSKHKKIIFH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgggaaataattttgttttctttgtcagctttgagaaatgtgtttttatggta
gaggaggaaatacatttgtatttttcagtattgcactgcagagtctggtcttctgtaact
tctgagcttaggatggaagaagcagaggagcagagtaatgagaagggaggagatccagtg
ccagcccaggaacctcctgctgctgatttggactctgcatccactgctgatgtagaggac
acaccattggcttctactgaagaaggtgcatgcaagacaacagttgactcgaaaatggac
acagaggaagaagaaaaagaaaaagtaaaggaacaggaagcttctgaatcctcctcatcc
ttggtggtggcgacagcagcagcaacaacagaaagagctgaaagagatgacggtgcatta
cagtcatcccaagccaagaagatgaaaatagaagtgaaagagaagaaggagaaaaaacag
aaagtggatgaggatgaaattcagaaaatgcagatattagtttcttctttttctgaagag
caactgaatcgttatgaaatgtaccgtcgctctgcttttcctaaggcagctatcaaaagg
ttaatccagtctatcacaggctgctctatctctcagaacgtggtcattgctatgtctgga
attgccaaagtctttgtgggagaagtagtggaagaagctctggatgtctgtgagaagtgg
ggagagtcaccacctcttcaacccaagcacatgcgagaagctgtccgaaggctgaaatcc
agaggacaaattccaaactccaaacataaaaaaatcatctttcattaa
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