Geotrypetes seraphini (Gaboon caecilian): 117347344
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Entry
117347344 CDS
T09159
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117347344 (ELP1)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117347344 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_IF140-IFT172
TPR_GEMI5
CBM_21
CHASE4
Motif
Other DBs
NCBI-GeneID:
117347344
NCBI-ProteinID:
XP_033774042
UniProt:
A0A6P8NDY0
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All DBs
Position
1:405004272..405886433
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AA seq
1333 aa
AA seq
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MRNLTLQCVRGCGVAAVFSGSPQALHVRPGTGTVLVVWDCGVGELDLSSEQLKNEVSLIA
EGFLSEDGTGRIIGIQDLLDQESACIATSAGDVILYNFCTRQLECVGTVESGLIVMSWSP
DQELVLLVTGQETLILMTKEFEPIAETSLNQEDFGEGKFVMLGWGRKATQFHGSEGKRAA
QPKPTGVQPALPWDDHRPRVSWRGDGQYFAVSTVCSETRARKIRIWNRELALQSTSEPVS
GLEVALSWRPSGNLIASTQSKPHRHDVVFFEKNGLLHGEFTLPFSKGQVKVNDLLWNLDS
TVLALWLEDLQKDGSPDINTYIQIWTVGNYHWYLKQSLNFGSSENSKVSALTWDSEKPYR
LHILCQGWHYLCYDWHWSTDRSTGEDPYDLAIVAVIDGDKVLVTAFQQSVVPPPMCSFHL
QFLHPVNQVAFLQSPQKSNDLAVLDASNRISIYRYDHSVVKDEVVELGQAGRNGFKLVPV
MPYLEKIYRINFEANDEKGINPLRIQHLTWVQDDTFLAISCNYPFSQSVIHHLTLTSSEN
GDKEGCMEIRSAMTVDGQVISLCYSPKTRVAALQLADGQLLKYLWAFPAATLDPWKNGNG
HPVRFPHLCVQTVLAVVDGEVVILGLTERARFFINDMEIASNITSFAVYEEFLLLTTQAH
ICRCLSLMDTSLKELQALLSSPSIPNDETVRKVERGSRIVAIVPQDVKLILQMPRGNLET
IHHRALVMAQIRKWLDRLMFKDAFEYMRKLRINLNFIHDHNPKVFLDNVEVFIKQIDSVN
DINLFLTELKEDDVTKTMYPSAASNSQSPVVLDGKKVDHICDVMRTVMDKINPHKYCLSI
LTCHVKRSIPELEIALQRVHELRETAPLVGDAVSTEEALKYLLFLVDVNELYDHSLGTYD
FDLVVMVAEKSQKDPKEYLPFLNKLKKMETNYQRYTIDKYLKRYKKALDHLSKCGPEHFS
EFLNLVKDQNLYTDALKHCLVGTQEHKDVSILYGEYLNENRDYELAGLIFARCGDFEKAI
KAFLTCNNWQQVLCMAAQLKYSENKISTLARHMAGQLVERRKHTEAALLLEQYAKDYEEA
IILLLEGAAWEEALRVIYKYNRLDILETNLGPSILEAQRRHLVFLESQNTTFVRHKQRLT
IVREFKQQTHQEHLDEKAPEVLGDFFSDTSSTLTASDMSGKYSHSNSRISSRTSKNRRKA
ERKKYSLKEGSPLEDVALLEALGEIMSSVEKLKGEVHSLLKVLILFQYDEAARDLQHVFR
ETLELMEGSIPKIWPSDMQQNPAPLVFGPSSTANSIMASFQQQKSVLSTLQDAEIFMPPK
INRNFQWKLAMLE
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatctgactttgcagtgtgttcggggctgcggtgtagcagctgttttttctggt
tctccgcaggctttacatgtgcggcctggcactggtactgtgctggtggtttgggattgc
ggcgttggggagttggatctcagcagtgagcagctcaaaaatgaagtctccctgattgca
gagggctttctctctgaagatggcactggccgcattattggaatccaggatttattggac
caggagtctgcatgtattgcaacaagtgccggagacgttatattatataatttctgcaca
cggcagctggaatgtgttggaactgtagagagtgggcttattgtcatgagctggagtcct
gatcaggagctggttcttctggtgacagggcaggaaactcttatactgatgacaaaggaa
tttgaaccaattgctgaaacatccctgaaccaggaggactttggagaaggaaagtttgtc
atgcttggctggggtaggaaggcaacacagtttcatggatcggagggcaaacgagcagct
cagcctaagccaacgggggtacagcctgctttaccttgggatgaccacagacctcgagtc
agctggagaggagatggacaatattttgcagtcagcactgtctgctcagagacaagggct
cgaaagatcagaatatggaatagagagcttgctctgcagtctaccagtgaaccagtgtca
ggcttggaagtggccctttcgtggagaccttcaggaaatttgatcgcatccacacagagt
aaacctcatagacatgatgttgttttttttgaaaagaatgggctcctacatggcgagttc
acacttcctttctctaaaggtcaagttaaggttaatgacctgctgtggaatttggactcg
actgtgctggcactttggctggaagatctacagaaggatggcagcccagatatcaacaca
tacattcaaatttggacagttggaaattaccactggtacctgaaacagagcctcaatttt
ggcagcagtgagaacagcaaggtctcggctctgacttgggattctgagaagccttaccgt
ctacacatcttgtgccagggctggcactatctctgctatgactggcactggagcacagat
cgcagtactggagaagacccatatgacttggcaattgtggctgtcattgatggagataag
gttttggtgacggcctttcagcagtctgtggttcctcctccaatgtgctccttccacctg
cagtttttgcacccagtgaatcaagttgcatttctccaaagtccccagaagagtaatgat
ctggctgtacttgatgcaagcaatagaatttccatttacagatatgaccatagtgtagtt
aaggatgaagtggtagagcttggacaagcaggaagaaatggatttaaactggttcctgta
atgccttatctggaaaagatatacagaattaattttgaagccaatgacgagaagggaata
aatccactgaggatccagcatttgacttgggtgcaggatgatacttttctggctattagc
tgcaactatcctttttcccagtctgttatccaccatttgacgttgacctcatcagaaaat
ggggacaaggagggatgcatggaaatcaggagtgctatgactgtggatgggcaagtgatc
agcctgtgttatagcccaaagactagggtggcggctcttcagctggcagacgggcagctt
ctgaagtacctctgggcatttccagcagccacccttgacccatggaagaatggaaatggc
catcctgtccgatttccacatctgtgtgtgcagacagtgctggctgttgttgatggagag
gttgttatcttgggtttgacggagagagctcgctttttcattaatgacatggagattgct
tcaaacattacatcctttgctgtgtatgaggagttcctattgctgaccactcaagctcac
atttgcaggtgcctctccctgatggatacatcgctgaaagagttacaggctctcttgagt
agcccttcaattcccaatgatgagactgtgcgcaaagtggaaaggggatctcgtatagtc
gctattgtgcctcaggacgtaaaactcatcttacagatgccaaggggaaatttagaaact
attcatcatcgagctctcgttatggcgcagattcggaaatggctggacagacttatgttt
aaagatgcatttgaatacatgaggaaactccgcatcaacctcaatttcattcatgatcac
aacccaaaggtatttttggacaacgtggaagtatttataaagcaaattgactctgtgaac
gacatcaatttgtttttgactgaattgaaagaagatgatgtcacaaagactatgtaccct
tcagctgccagcaacagccagtcacctgtggttcttgatggtaaaaaagtagatcacatt
tgtgacgtgatgagaacagtgatggacaaaattaatcctcacaagtactgtttatccatt
ctgacgtgccatgtaaagagaagtatcccagagctagaaattgcactgcagagggttcat
gagcttagagagactgctcctttggtgggtgatgctgtcagtacagaagaagctctgaag
tacttattgttcctggtcgatgttaatgagctgtatgatcattcattggggacatatgat
tttgatctcgttgtcatggtggcagagaagtctcagaaggaccccaaagagtacctccca
tttttaaacaagttgaagaaaatggagaccaattaccagagatacacaatagataaatat
ctgaaaagatacaaaaaggctcttgatcatcttagcaaatgtgggccagaacatttttca
gaatttttaaacttggtaaaagatcagaacttgtacactgatgccctgaagcattgcctt
gtaggtacccaagagcataaggatgtcagtatactgtatggagaatacttaaatgaaaat
cgggattatgaactagcagggctcatctttgctcgttgtggtgactttgagaaagctatc
aaagccttcttgacatgtaacaattggcaacaggttctctgtatggcagctcagcttaag
tattcagaaaataaaatatccacccttgctaggcacatggcagggcagctggtggaacgg
agaaagcatactgaagcagctctgctgctagagcaatatgccaaggactatgaagaagcc
atcatattactgttagaaggagctgcctgggaagaagccttgagagtgatctacaaatac
aataggctggacattttggaaacaaacctaggaccttccattctagaagctcagagacgt
catttggtgttcttggaatctcagaatacaacatttgtgcgtcacaagcagcgtctcacc
attgttcgagagtttaaacagcaaacacaccaagaacatctagatgaaaaggcacctgag
gttctgggcgacttcttttcagacactagcagtaccttgacagccagtgacatgagtggc
aaatattctcacagcaattccaggatatcttcgaggacttcaaagaatcgacgcaaggca
gaacgtaagaagtatagcctaaaggaaggaagtcccttggaagatgttgctctcctggag
gccctgggagaaatcatgtcttctgtggaaaaactgaagggtgaggtgcatagcctttta
aaagtacttattctgtttcaatatgatgaagcagccagagacttgcagcatgtcttcaga
gagactctagaattgatggaggggtctatcccaaaaatctggccttcggacatgcaacag
aaccctgctcctcttgtcttcggtcccagttctactgcaaacagtattatggcttctttt
cagcagcagaaatccgttctctctacacttcaagatgcagaaatttttatgccaccaaag
attaacagaaactttcagtggaaacttgccatgttagagtaa
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