Geotrypetes seraphini (Gaboon caecilian): 117347417
Help
Entry
117347417 CDS
T09159
Symbol
LRIG2
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
LRR_1
V-set
LRR_9
C2-set_2
Ig_5
C2-set_3
LRRCT
LRRNT
LysM2_CERK1_LYK3_4_5
Syndecan
Motif
Other DBs
NCBI-GeneID:
117347417
NCBI-ProteinID:
XP_033774223
LinkDB
All DBs
Position
13:8215244..8268308
Genome browser
AA seq
1098 aa
AA seq
DB search
MMAAARPGPRLRPPPPLLLLLLLLLLSPPLPEASCPAPCSCSGHTLDCSRRKLSRAPPLS
LGITGLDLSHNQFTSNSSLNLDLHTLQEVKMNYNEVTAVPYLGDATMNITLLSLVHNKVL
EVTSECLQFYLSLETLDLSSNLISEIKTSSFPPMQIKYLNLSNNRIQTLEAGCFDNLSSS
ILVLKLNRNRISAVQPKMFRLPHLQHLELKRNRIKIVESLTFQGLESLKSLKMQRNGISK
LMDGAFFGLDNMEQLELEHNNLTEVSKGWLYGLRSLQQLYLSQNVISKISPDACEFCQSL
WELDLSCNQLTRLDESAFAGLNMLEKLNLGDNRVNHIADGVFKGLTNLQTLDLRNNEISW
AIEDSNEAFADLGKLNKLILQGNEIKSITRRAFAGLESLQHLDLSNNAIVSIQENAFAHL
QLQELLLNTSNFLCDCQIKWFLQWLSDSNLQQAVMVSCAHPDWLTGRSLLSVNAEDFVCD
DFPKPQIKVQPQTTVALKGMNVTFTCVAMSSSDSPMASVWRKDNEILYDAEVETFARYQR
HGAEVLQYTTTLHLFSVNFTDEGKYQCVTTNHFGSNYSSKAKLTVNEMPSFLKTPMDLTI
RTGAMARLECAAEGHPMPQIAWQKDGGTDFPAARERRMHVMPEDEVFFIADVKIEDMGQY
SCMAQNIAGSISANVTLTVLETPFFLRPLEDRTVARGGTAVLQCIAGGSPAPRLNWTKDD
GPLTVTERHFFAAANQLLIIVDAGPEDAGKYTCIMSNTLGTERGHIYLNVILSRNCDSSQ
PNVGYEDDSWTTVGIVIIVIVCCVVGTSLVWVIVIYHMRRKNEDYSISSTEEMNLPADIP
SYLSSQGTLSEPPEGYSNSEAGSHQQLMPPASGFVHRGTDGLYVDTGSETDTEMINASFP
SNLPGRMGPLFSSRCSFQPGEAPEGLAQLPIPGGTGPLVICSDCYDNANIYSRTREYCPY
TYVPEEDPLDQTLSSLMVQIPQSAQAQNEAAAMESLLADRALSVYPTSRDRRSDQKIASP
QINNESFQHFWELSKESGISVAGLSQQIATVQENPEALESEDMQERGDCPPPQSCQRLQT
QNVDLNRTQSIQEYKENT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggcccggcccggcccccgcctccggcctcctcctccgttgctcctcctc
ctccttcttctcctgctcagcccgccgctccccgaggcctcctgccccgcgccctgttcc
tgcagcgggcacacgctggactgcagccggaggaagctctcccgggcgccgcctctgtcg
ctcgggatcaccggcctggatttaagtcacaaccagttcacatccaactccagcctcaat
ctggacctgcatacacttcaggaagtgaagatgaattacaatgaagtaactgcagttcct
tacttgggagatgcaacgatgaacatcactcttctgtccctagtacataataaagttttg
gaagtaactagcgagtgcctccagttctacctttccctagagactttggatctcagctcc
aatctcatctcagaaattaaaacctcttcgtttccaccaatgcagatcaagtacttgaat
ttgagcaacaacaggatacagaccctggaagcaggctgctttgacaatttatccagttca
atacttgttctaaaattaaaccgaaacagaataagcgcagttcagccaaaaatgttcaga
ttgccccatctgcagcacctggaactgaagagaaacaggatcaaaattgtggaaagcctt
acattccaagggctggaatccttgaagtctctgaaaatgcagcggaacggcatcagcaaa
ctgatggacggggcattctttgggctggataacatggaacagttagaactggagcacaat
aacctgacggaagtgagcaagggttggctttacggcctacgatctttacagcaactttac
ctgagccagaatgttattagcaagatcagtccggatgcatgtgaattctgtcagagccta
tgggagctagatctgtcctgcaatcagttgacccgcttagatgagtcggccttcgcaggg
ctgaacatgttggaaaagctaaatctgggggataacagagtcaatcacattgccgatggt
gttttcaagggcctcacaaaccttcagacgctagatttgaggaacaacgagatctcgtgg
gccatcgaagattcaaacgaagcttttgcagatctcggcaagctcaataaattaatctta
caaggaaatgaaataaaatctattacaaggagagcatttgctggtctagagtcccttcag
catcttgatttgagcaataacgctattgtatctatccaagaaaatgcttttgcacatctt
cagctccaagaactattgttaaacacaagtaactttctctgcgattgccagataaaatgg
tttcttcagtggctctctgacagcaatttgcagcaggctgtgatggttagctgcgctcat
cccgactggctaacagggcgaagtctcttaagtgtgaacgctgaagattttgtctgtgat
gatttccctaaaccgcagatcaaggtccaaccccaaactacagttgccttaaaagggatg
aatgtgaccttcacctgtgtggctatgagcagcagtgactcgcctatggcatcggtatgg
cgtaaggacaatgaaattctgtacgatgcagaagtggaaacctttgccaggtatcagaga
cacggagctgaagtcctgcagtacacaaccaccttgcatctcttcagcgtaaatttcaca
gacgaaggaaaataccagtgtgttaccacaaaccactttggttccaactactcttctaaa
gccaagctgacagtcaatgagatgccctcattcctgaaaacccccatggatctgactatc
cgcactggcgctatggcccgattagagtgtgctgcggaaggccatcccatgccgcagatc
gcatggcagaaagacggtgggacagattttcctgctgcacgggaaaggcgaatgcatgtc
atgcctgaagacgaggtcttctttattgcagatgtgaaaattgaagacatggggcagtac
agttgcatggcacagaatattgcaggaagtatatcggctaatgtcaccttaactgtgctg
gagacaccattctttttgcgacccttggaagataggacagtggctcgagggggaactgct
gtcctgcagtgtatagcaggtggcagccctgcccctcgcctcaactggaccaaagacgac
gggcccctgacagtgactgaacgccacttttttgccgcagccaatcagcttctcatcatt
gtcgacgccggcccagaggatgctgggaaatatacatgcatcatgtccaatacacttggg
acggagcgtggacacatctacctgaatgtaattctgtcccgcaattgtgactcctctcag
cccaatgtgggctacgaagacgacagctggactacagttggcattgtgatcattgttatc
gtatgttgcgttgtgggcacctctttggtttgggtgatcgtcatatatcacatgaggaga
aagaatgaagactacagtataagcagcacagaggagatgaatttaccagcggatattccc
agttacctctcctcccagggaacgctttcggagcctccagaaggttacagtaactctgaa
gccggtagtcatcagcagctcatgccccctgcaagtggttttgtgcacagaggaacagat
ggactttatgtagacacaggtagtgagacggatacagaaatgataaacgcttcattcccg
tcaaacctgccaggcagaatgggacctctcttctccagccggtgcagcttccagccagga
gaggcacccgagggactggcgcagctgcctattccaggtggaactgggcctctggtgatc
tgctccgattgctacgacaatgcaaacatctactccaggacacgggagtattgtccatac
acgtatgttcccgaggaggatcctctagaccagaccttatccagtctgatggtgcaaatc
ccccaaagtgctcaggcacagaatgaagctgcagccatggagagtctgctagcagaccga
gcactgtccgtttaccccaccagtcgtgacagacgaagtgatcagaaaatagcctcgcct
cagattaacaacgaatcttttcagcatttctgggaattaagcaaggaatcgggaatttcg
gtcgctggcctttcacagcagatagcaactgttcaggagaaccctgaagcccttgaaagc
gaggacatgcaagagagaggagactgtcctccaccccaatcttgccagaggttacaaaca
caaaacgttgatttaaataggactcagagcattcaagagtataaggaaaacacatag
DBGET
integrated database retrieval system
