Geotrypetes seraphini (Gaboon caecilian): 117347437
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Entry
117347437 CDS
T09159
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh02010
ABC transporters
gsh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117347437 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117347437 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117347437 (ABCA1)
Transporters [BR:
gsh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117347437 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
117347437
NCBI-ProteinID:
XP_033774294
UniProt:
A0A6P8NTP0
LinkDB
All DBs
Position
1:complement(408257571..408522493)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFGTQLGLLLWKNFTYRRRHMFQLLIEVAWPLLIFFILISVRLSYPPHEQHECHFPNKA
MPSAGTLPWLQGIICNANNPCFRYSTPGEAPGVVGNFDKSIVSRMVSDMRNLLLYSQKDS
SLQDARRMLKILRKLGAAGSGVKLQDFLGQNESFSSYLQHNLSLPYFAVDEIMNADIHLE
QVMLSGHKIRLKDLCNSSKLAEFVTIHNKAVAALSEVTICAMTVEQLKTAEKVFLSNIDL
LGPMKKGLFAKSFPVHELKEATETLLTSLEKLTKELATMSSWREMRQEVLFLTNPNITSS
PTQIHQAVSRIVCGHPNGGGLKIKSLNWYEDSNYKALFRVNDTEDEAQVVFDNSTTPYCN
ELMKNLEHSPMARMIWRALKPLLIGKVLYTPNTPATRVLMAEVNKTFQELGVFHDLGGMW
EELKPKIKKFMESSQEMDLVRTLLKNKGSQRLWDQQLNNSVWTAEDISRFLAKHPEDIQS
ADEVYTWRDALNETGQAVQTVSHFMECVNLDKLEPVGTEAHLISKSMELLKERKFWAGII
FMEMPPSSTELPHHIKYKIRMDVDNVERTNKIKDRYWDPGPRADPFEDMRYIWGGFAYLQ
DVVEQAIIRVQTGTEDRTGVYMQQMPYPCYVDDIFLRIMSGSLPLFMTLAWIYSVALIIK
GIVYEKEARLKETMRIMGLNNSILWLSWFISSFIPLLMSAILLVLILKMGNLLPYSDPSV
VFTFLSIFAMVTISQCFLISTLFSRANLAAACGGIIYFMFYLPYVLCVAWQNFLGFPLKL
FVSLLSPVALGFACENFAVFEEQGVGVQWANLLQSSKDGYSVTTSAFMMLFDTFLYGVMT
WYIEAVFPGQYGIPRPWYFPFTKTYWCGEEMKDENRSCPAKPGASQICMEEEPTHLHLGV
SIQNLVKIYRDGEKMAIDGLTLSFYEGQITSFLGHNGAGKTTTMSILTGLFPPTQGTAFI
LGKDIRSELSSIRQNLGVCPQHNVLFDTLTVEEHIWFYARLKGLSENKVKAEMEQMVTDV
GLPHKKHAKSSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKNVDPSLS
SCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSVISNLINKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISDTTLEEIFLKVAEDTGVDAE
TSDGTLPARRKRYVFGERQNCLQPFIEDDNFDPNDSDVDPESRETDLLSGMDGKGSYQVK
GWNLVRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVLIALLVSLIVPPFGKYPSLKLH
PWMYDEQYTFISNDAPEDASTQKLLKALLDDPGFGTPCMKGQSSPDNHCSMEDEDWVTPP
LSPAIMDIFLNGNWTMDNPSPSCECSSEKSKKMLPVCPPGAGGLPPPQKKQKTTDILQNL
TGRNISDYLVKMYAQIIGKSLKNKISVNEFRYGGFSLGASSAQVLLQSTEISDSINQVKK
LFELAKGDAAIRFLDNLGTFLKGLDTKDNVKVWFNNKGWHAISAFLNVINNAILRSNLRE
EVDPSTYGITAYNHPLNLTKEQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHMHRISGVRPVIYWLANFVWDMCNYIVPATLVIVIFVCFQQESYVSSSNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSMNLFIGINGSVATFVLEFFTDNKLNDIN
DTLKMVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPMSWDLVGRNLFAMAIEG
VVFFIITLLIEYRFFIKPRPRCPKLAPVIDEDDDVARERQRIMCDSGRSDILEIKGLTKV
YGMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFMMLTGDTDVTGGEAFLKGNSILTN
IQEVHQNMGYCPQFDAINELLTGREHLELYALLRGVPEKEVCKVAEWVIRKLGLVKYCEK
CVGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCVLSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIVVRITGSNPDLKPVEEFFG
HAFPGSVLKEKHRSMLQYQLRSSQSSLARIFSILSKNKKRLKIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDMSLHKNQTVVDVALLTSFLQNEGEKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgggacacagctgggattgctgctgtggaagaactttacgtatcggcgaagg
catatgtttcagctgctgattgaagttgcctggcctctgcttatctttttcatactgatc
tctgtgcgactttcctacccaccacatgaacaacatgaatgtcattttccgaacaaggca
atgccctctgcaggaacattgccatggttacaaggaattatctgtaatgccaacaacccc
tgtttccgctactccactcctggagaagctcctggagttgttggaaattttgacaaatct
attgtttcccgcatggtttcagatatgaggaatttactcctgtacagccagaaggactcc
agtttacaagatgcccgcaggatgctgaagatactgcggaaattgggtgcagcaggctca
ggtgtgaaacttcaagacttcctggggcagaatgagagtttctctagttatctccaacac
aatctctctttaccatactttgctgtggatgagatcatgaatgctgacattcatcttgaa
caagtcatgctatctgggcacaagataagactgaaggatctatgcaacagctcaaagttg
gccgagtttgttaccatccacaataaggcagtggctgcactcagcgaggtcaccatttgt
gccatgactgtggaacagctgaaaacagccgagaaagtattcctctctaacatagatctc
ctgggacccatgaagaaaggattatttgccaaatcttttccagtccatgagttgaaagag
gctactgagacattgttgacaagtcttgaaaaactcactaaagagctggcgaccatgagc
agctggcgtgagatgaggcaggaggtgctctttctgaccaaccctaacatcacaagctcg
cctacccagatacaccaggcggtgtcacggattgtgtgtggccatcctaatggagggggc
ttgaagatcaagtccctcaactggtatgaggacagcaactataaggcgctcttccgtgtc
aatgacacagaggatgaggcacaggtcgtgtttgacaattctaccacgccttactgcaat
gaactaatgaagaatttagaacacagtcctatggcccgaatgatctggagagcactgaag
cccttgctcattggaaaggtcctctacacccccaacacacctgccacaagggtgctgatg
gccgaagtgaacaagactttccaggagctgggcgtgttccatgacctcggtgggatgtgg
gaggagctaaaacccaagatcaagaaattcatggagagcagccaggaaatggatttggtc
aggacattgttaaagaacaagggcagccagcgcctttgggatcaacagttgaacaactcg
gtttggacagctgaagatatttccaggtttttggcaaagcacccagaggacatccaatct
gctgacgaggtatacacctggagagatgctctcaatgagacaggacaggctgttcagact
gtgtcgcatttcatggagtgtgtcaacctagacaagctggagcctgtgggtacagaagcc
catctcatcagcaagtccatggaactcttgaaagaaaggaagttttgggctggtattatc
ttcatggagatgccccccagcagcactgaacttccacatcacatcaaatataagatccgg
atggacgtagacaatgtggaaaggacaaacaaaattaaggatagatactgggatcctggt
cctcgtgctgacccctttgaagacatgcgctatatctggggtggctttgcttacttgcag
gacgtggtggagcaagcgataatacgggtgcagacaggcactgaggacaggactggggtt
tatatgcagcagatgccttatccttgctatgttgatgacatatttctacgaatcatgagt
ggctctctgcctctttttatgaccctggcttggatctactctgtggcactgatcatcaaa
gggatcgtgtatgagaaggaagctcgtctgaaggagacgatgaggatcatggggctgaac
aacagcatcctctggttgagctggttcatcagtagcttcatccccctgctcatgagtgct
atcctcttggtgctgattctgaagatggggaatctgctgccatacagtgaccccagtgtg
gtttttaccttcctgtccatctttgccatggtgactatctcgcagtgcttcctgatcagc
accttattctctagggcaaaccttgcagctgcctgtggagggatcatctacttcatgttc
tacttgccctacgtgctctgtgtggcctggcagaactttttgggcttcccactcaaactc
tttgtgagcttgctgtcccccgtggccttagggtttgcctgtgagaactttgcagtcttt
gaagagcaaggggtcggagtacagtgggccaaccttttgcagagctctaaggatggctac
agtgtcacaacttcagccttcatgatgctgtttgatactttcctctatggggtgatgacc
tggtacatcgaagcggtctttccaggtcagtatggaattcccagaccttggtacttccca
ttcacaaagacctactggtgtggtgaagagatgaaagatgagaaccggtcatgtcctgct
aagcctggagcctctcaaatctgcatggaggaagaaccaacacatctccatcttggggta
tcgattcagaatttggtgaagatataccgtgatggtgaaaagatggccatagacggcctc
acactaagtttctatgaagggcagatcacgtcttttctgggtcacaatggagcaggaaaa
acaactactatgtcgatcttgacaggtttgttccccccaactcagggcacagcgttcatc
ctggggaaggacatccgctctgagctcagctccatcaggcagaatttgggagtctgtcca
caacacaatgtgctttttgacacgctgacagttgaggaacacatctggttctatgcacgc
ttgaaggggctgtctgaaaataaagtgaaagcagagatggagcagatggtgactgatgtc
ggattgcctcacaagaaacatgctaaatcaagtcagctctcaggtggcatgcagcgaaag
ctctctgtggccttagcttttgtgggtggatccaaggttgtgattttagacgagcccaca
gccggagtggatccttattcccgcagaggaatttgggaactgcttctgaagtatcgacaa
ggccgcacaatcattctctcaactcatcacatggatgaggctgacatcctgggggaccgg
atcgctatcatatcccatggcaagctgtgctgtgttgggtcttctcttttcctgaagaac
cagctgggaacaggttattacttgaccctggtcaagaagaatgtggacccatccctgagt
tcctgtagaaatagcagcagtaccatgtcttacctgaaaaaggaggacagcgtttcccag
agtagctcggatgctggactgggcagtgaccatgaaagcgatacactgacaatagatgtt
tctgttatttccaatctcatcaacaagcatgtttcagaagcccggctggtggaggacatt
gggcatgagctgacatatgtgttaccctatgaagctgctaaggagggagcttttgttgaa
ctgttccatgagattgatgatagactgtctgaccttggtatttccagctatgggatctca
gacaccaccctagaagagatatttctcaaagtggcggaagacactggtgtggatgcagaa
acttcagatggaacattgcctgccagaaggaagagatatgtctttggagagagacagaac
tgcctgcagccattcatagaagatgataattttgacccaaatgattctgatgtggatcca
gaatcccgtgagaccgaccttctcagtggcatggatggcaaaggttcctatcaggtgaag
ggctggaatctagtgaggcagcaatttgtggccctcctttggaagagactgttgtatgcc
aggcgaagcaggaagggcttttttgcacagattgtgttgccggcagtttttgtgctcatt
gctctgttggtcagtctgatagtgcctccttttgggaagtatcccagcctgaaactgcat
ccgtggatgtatgatgagcagtacaccttcatcagcaatgacgcccctgaagatgcaagc
actcaaaagctgctgaaagcactgctggatgaccctgggtttggtactccatgtatgaaa
ggacagtcttctccggacaatcactgctcaatggaagatgaagattgggtcacgcctcca
ttgtccccggctattatggacatcttcctgaatgggaactggacaatggacaacccttct
ccatcatgtgaatgcagcagtgagaaaagcaagaaaatgctcccagtttgccctcccgga
gctggtggacttccccctcctcagaagaaacaaaagactacagatatcctccagaatctg
acagggagaaacatctcagattatctggtgaagatgtatgcacaaatcattggcaagagt
ttaaagaataagatttcagtaaatgaatttaggtatggtgggttctcattgggtgccagc
agtgctcaggtgcttcttcagagcacagaaatcagtgattccatcaaccaagtgaagaaa
ctctttgagctagccaagggagatgctgcaattcgatttctggataatctgggaactttc
ttgaaaggacttgacactaaagataatgtgaaggtgtggtttaataacaaaggatggcat
gccatcagtgcatttctcaatgtcataaataacgctattctacgatccaacctccgagag
gaagtagaccctagcacatatggaatcacagcctacaaccaccctctgaacctcaccaag
gagcagctatctgaagtggccctgatgaccacatcagtggatgttctggtttcaatctgt
gtcatctttgccatgtcattcgtccctgcaagctttgtggttttcttgattcaggagcga
gtcagcaaggccaagcacatgcaccgcattagtggcgtgagacctgttatctattggctg
gctaattttgtttgggatatgtgcaattacattgttccggctacacttgtcatcgtcatc
tttgtctgctttcagcaagagtcttacgtgtcctcgtctaatctacctgttctggctctc
ctcctcttactttatgggtggtctataacccctctaatgtacccagcatcctttgtgttc
aagatccctagcacagcctacgtggtgctcaccagtatgaacctttttattgggataaat
ggcagtgtggccactttcgtccttgagtttttcaccgacaacaaactgaatgatattaat
gataccttaaagatggtgctcctgattttccctcatttctgcttgggccggggtttgata
gatatggtgaagaatcaagctatggctgatgccctggaacgcttcggtgagaatcgcttt
gtctccccgatgtcctgggatctcgtgggccgaaatctgtttgccatggctattgagggt
gtggtcttctttatcatcaccttgctgatagagtataggtttttcatcaagccaaggcca
aggtgccccaaacttgcccctgtgattgatgaggatgatgatgtggccagggaaaggcaa
aggataatgtgtgacagtggccgaagtgacatcctggaaatcaaagggctgaccaaggtc
tatgggatgaagaggaaaccagccgtggacaggctttgtgttgggattccccctggagag
tgcttcggacttttaggagtcaatggcgctgggaaaacaacaactttcatgatgctgact
ggagacacagatgtgactggaggagaagctttcctgaaaggcaacagtatcttgactaac
attcaagaggttcatcagaatatgggatactgtcctcagtttgatgccatcaatgaactg
ctaacaggccgtgagcatcttgagttatatgcactcttacgaggagttcctgagaaggaa
gtctgcaaggtggctgaatgggttattcgcaaattgggccttgtgaagtactgtgaaaaa
tgtgtgggcaactatagtggagggaacaaacgcaagctgtctactgccatggcgctgata
ggagggccacctgtggtattcctggatgaaccaactacagggatggatcccaaagcacga
cgcttcttatggaactgtgtgcttagtgtcattaaggagggtcgatctgtggtgctcacc
tctcacagtatggaagaatgtgaagccctctgcactcgaatggcaataatggtcaatggg
agattccgatgtttgggcagtgtccaacatttaaaaaacaagtttggagatggctatacg
atagtagtgcgaataacagggtcgaatcctgacttgaagcctgtggaggaattctttggg
catgcctttcctggcagtgtactgaaggagaaacataggagcatgcttcagtaccagctg
cgctcttcacagtcgtctttggccaggatatttagtatcctctccaaaaacaagaagaga
ctcaaaatagaagactactctgtttctcagacaacacttgaccaagtttttgtcaacttt
gctaaggaccaaagcgacgatgaccacttaaaagacatgtcattgcacaaaaatcagaca
gttgtcgatgttgcactccttacatcatttttacaaaatgaaggggagaaagaaagctat
gtgtga
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integrated database retrieval system
