Geotrypetes seraphini (Gaboon caecilian): 117347499
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Entry
117347499 CDS
T09159
Symbol
UBE4A
Name
(RefSeq) ubiquitin conjugation factor E4 A isoform X1
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117347499 (UBE4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117347499 (UBE4A)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117347499 (UBE4A)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
U-box type E3
117347499 (UBE4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117347499
NCBI-ProteinID:
XP_033774431
UniProt:
A0A6P8PFN1
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Position
13:complement(24540089..24590993)
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AA seq
1096 aa
AA seq
DB search
MERKLSVPPLPESGWNNILDEMTDQENNNSISENPFAALFSSLADAKQFAAVQKQQQLAD
EEATGSQDESDNSVSESLDDYDDSLAEFSRSFRSQQELCEQLNINHMIQRIFLITLDNSE
PSVKSENGIPARCVYLEEMGADLDGQDWLDMSNVEQALFTRLLLPDPRSYLICMTSVNTQ
NLSADRDAGETHVLQYLFASFQRAQEEITKVPEKLLPFALRCKNLSVLNACTILLTPEMY
QNQNVHEQLVDLMVEALTRAHFEEVGEFLEDVIEALLADEEVQTFSEVMTPVFEVLLIRI
RELSLCQILLQTYLDVLLYITRQKDLARVFVEYIQPQDSNNGQMFQKTLLGEILNISCLL
KTPGVVENHDYFLNPSRSSPQEITVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRIL
SWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPKSPRLQTF
NPTYCALKELNEEERKSRNVHMKGLDKETCLIPSDTDQEPEFVPSYNLLTENLVLTQYSL
HLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSMREQFERLMTIYLSTKAAMTEP
QMLQNCLRLQVSTSLLLVQIAIGNHGTESVELTFPLPEVQHSMLAYIPEFFADNLGDFFI
FLRRFADDVLETFADCLEEVLHFITVFTGNVERMKNPHLRAKLAEVLEAVMPHLEPVQNP
LISSVFQRECVFCSYRYAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWG
KDTYRQSIKNLADYASLNLEAMTPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKD
RGEWDSLSAESRREKEASLQMFGQLARFHNIMSNETIGTLAFLTSEIRSLFVHPFLAERI
ISMLNYFLQHLVGPKMGALKVKDFSQFDFKPQQLVSDICTIYLNLGNEENFCATVPKDGR
SYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADRQMQEEETYADAPDEFLDPIM
STLMVDPVMLPSSRVTVDRPTIARHLLSDQTDPFNRSPLTMDQVRPNTDLKEKIQQWLAE
RKRQQKLHTEDRVETP
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaattatcagtcccccctcttcctgaatctggatggaacaacattttagat
gaaatgactgatcaggagaataacaacagcatctctgaaaatccctttgcagctctcttt
agctccttagcagatgccaagcaatttgcagctgtccagaaacagcagcagcttgcagat
gaagaagccacaggtagccaggatgagtcggataacagtgtgtcagaaagcctggatgac
tacgatgactctctggccgagttcagccgctcgttccgctctcaacaggagctgtgtgag
cagctcaacatcaatcacatgattcaaagaatcttcctcatcaccctggataacagtgaa
cccagtgtaaaaagtgaaaatggcattccagcgcgttgtgtgtacttggaagaaatgggg
gcagacctagatgggcaggactggttggatatgagtaatgttgaacaggctctcttcaca
cgcttgcttctcccggatccaagaagttatctgatctgtatgacatcggtgaacacacag
aatctttctgcagatcgtgatgcaggggagactcatgtcctccagtatctgtttgcctcc
ttccagagagcacaggaagagataaccaaagtgccagagaaactgctgccgtttgccttg
cgctgtaagaatttgagcgtgttgaatgcatgcaccatccttctcacaccagagatgtat
cagaaccagaatgttcacgagcagctggtggacctgatggtggaagcacttacaagagct
cactttgaagaagtgggtgagtttctggaggatgtgatagaagctttgctggcagatgag
gaggtgcagacattctcggaagttatgacacctgtgtttgaggttctgttaataagaata
agagagctcagcctgtgccagatcttgctacagacgtacttggatgtgctactgtatatt
acccggcagaaggacctagcaagggtttttgtggagtatattcaacctcaggactccaac
aatggtcagatgttccaaaagaccctgctgggtgagatcctaaatatctcttgtttgctg
aagacccctggtgtggtggagaatcatgactatttcctgaacccatcccgatcaagtcca
caggagataaccgtacaggagtccaatattcatcagttcatggcacaattccatgagaaa
atatatcagatgctgaagaacctgctgcagctgtctccagagacgaaacaccgcatcctg
tcctggctgggaaactgtctgcatgccaatgcagggcgcaccaaaatctgggccaatcag
atgccagagatcttcttccagatgtatgcctcagatgccttcttcctgaatctgggtgct
gctcttttaaaactgtgtcagcccttctgtaaaccaaaatctcccaggctccagactttt
aaccctacctattgtgccctgaaggagctgaatgaagaagagagaaaaagcagaaatgta
catatgaaaggtctggataaagaaacatgcttgataccatctgacactgaccaggagcct
gagtttgttcccagctataacctgctgacagagaatttggttttgacacaatattcactg
catctgggcttccatagattacatgatcagatggtgaagataaatcaaagcctacatcgg
ctgcaggtggcctggcgcgaggcacagcagagctccagtcctgccgcagatagcatgcga
gagcagtttgaacgtctgatgaccatctatctatcaacaaaagcagccatgacagagccc
cagatgctgcaaaattgcctaaggctgcaggtgtctacatcactgctcttggtgcagatt
gcaattggaaaccatggcacagaatcagtagaactaacgttccctttgccagaagtgcag
catagtatgttggcctatattccagaattttttgctgataatctgggagatttctttatc
tttctgcggcgctttgctgatgatgtgttggagacatttgctgactgtctggaagaggtt
ttacactttatcactgtctttacaggcaatgtggaaagaatgaagaaccctcatttacga
gccaagctagcagaagttctggaagcagtgatgcctcaccttgagcctgtgcagaacccc
cttatctccagtgtgttccaacgtgaatgtgtcttctgtagttataggtatgcagctcac
cttgccgaggctctcatcaaggtttttgtggacattgagttcacaggagacccccatcag
tttgagcaaaagtttaattatcgacgacccatgtacccaatccttaagtatatgtggggg
aaggacacgtatcggcagagtataaagaatttggctgactatgcctcactgaacctggaa
gccatgactccacctctcttcctgcgtttcctgaatctacttatgaatgatgccattttt
ctgctggatgaagccatacagtatctgagtaagataaaagttcaacaaatagaaaaggat
cgaggagagtgggacagtctgtctgcagaaagtcgccgggagaaagaagctagcttgcag
atgtttggccagctagctcgcttccataacatcatgtccaatgaaaccattgggacactg
gcttttctaacctcagaaataaggtcactttttgtacacccattcctggctgagcgcatc
atctccatgctgaactacttcttgcaacacctagtcgggccaaaaatgggggctctgaag
gtgaaggatttcagtcagtttgacttcaagccccagcaattggtgtctgacatctgtact
atctacttgaacttggggaatgaggagaatttttgtgccactgtgcccaaggatggacga
tcatattcacccacactctttgctcagacagtcagggtcctgaagaagataaacaagcct
gggaacatgattgtagccttcagtaacctggctgagaggatcaagtctcttgcagaccgg
cagatgcaggaggaggagacttatgctgatgcgcctgatgagttcctagatcccatcatg
agcactttgatggtggaccctgtgatgctgccctcttccagagtcactgttgataggcct
actatagcccgacatctactcagtgatcagactgaccccttcaatcgcagtccactcacc
atggaccaagtcagacccaacaccgacctaaaggagaaaatccagcaatggttggcagag
aggaaacggcaacaaaagttgcacacagaagacagagtagagacaccgtga
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