Geotrypetes seraphini (Gaboon caecilian): 117347667
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Entry
117347667 CDS
T09159
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
gsh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117347667 (CASC3)
03015 mRNA surveillance pathway
117347667 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117347667 (CASC3)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117347667 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117347667
NCBI-ProteinID:
XP_033774772
UniProt:
A0A6P8NFU9
LinkDB
All DBs
Position
13:65568542..65614674
Genome browser
AA seq
716 aa
AA seq
DB search
MGCVVLSQGHPLPSQPAPRPGGKMADRRRRRRQRASQDSEESGTESSGSGGGPAVPVVAV
GTETAAGKEEGAASECESEDGIAEDAVLSDYESAEDNSGAEEEERQSSEEEHPKVVLKRD
GQAAQEPAPKEDGRQEKADQKGAVTGERQSGDGQESTEPAENKVSKKSQKPLDDDEDRKN
PAYIPRKGLFFEHDLRGQIQEEETRPKGRQRKLWKDEGRWEHDRFREDEQAPKSRDELIS
MYGYDIRSVNSAEDIRPRRMRKPRFGSPPRREQNWSSEKPNRPPPRYQGPSSEPPPRNFN
SRNSGGPGRASLPSNFSRAGGYKENRSNFRASEPNEHRGVYPSERIKLEHGSHRTWSSEQ
NITRAPSLELDTLPTSQNDPVKKEEITSENQTAAPVETIQQPPQDKPIEKKSYSRVRRSR
VKGSDTVKPPEESPPVEAPPPMPQKQVQVMPPPAVKSNSWEVPVDHSISALEQEVAEMTV
SEQNWSPSVGQPQFIQPRELRGIPNHMHMGSGPPRFNRMEEMGVQGGRAKRYSSQRQRPV
PEPAPMHISIMEGHYYDPLQFQGPIYAHSESPAPLPPQGMIVQPEMHLPHPVPGLHPHQS
PAPMTNPSLYPPPVSLPPGQPPPQQLLPPPYFSPAGVMNFGNPSYPYTPGALPPPPAPPH
LYSNTQAQSQVYGGVTYYNTVHQQVQPKPSPPRRTSHPVTVKPPPPEENYKEKTST
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtgtagttctctcgcaggggcatcccctcccttcccagcctgccccgcgccca
ggcgggaagatggcggacaggcgacggaggaggcggcagcgcgcgtcccaagacagcgaa
gagtccggcaccgagagttcaggttccggaggtgggccggcagtaccggtggtggctgta
gggaccgaaaccgccgctgggaaggaggagggggccgcgtccgagtgtgaaagtgaagac
ggtatagcagaggatgctgtcctctcggattatgaaagtgcagaagataactctggagcg
gaggaagaagagaggcagtcaagtgaggaggagcacccaaaggtagtgctgaagcgagat
ggccaagctgctcaagaacctgccccaaaagaagatggaaggcaagagaaagcagatcaa
aaaggagctgtcactggggagagacagagcggtgatggacaggagagcacagagcctgct
gagaacaaggtcagtaaaaagtcccagaagcccctggacgatgatgaggacagaaaaaat
cctgcttacattcctcgtaaagggctcttctttgagcatgacctgcgggggcagatccaa
gaggaagagaccagaccaaaaggccgccagcggaagctgtggaaagatgaaggccgatgg
gagcatgacaggttccgtgaagatgagcaggcacccaagtctagggacgagctgatttcc
atgtatggttatgacatccggtcagtgaacagtgccgaggacatccggcccagaagaatg
aggaaaccacggtttggaagcccgccaagacgggagcagaactggtccagtgaaaagcca
aaccgtccccctccacggtatcaaggccccagcagtgaaccacccccacgtaacttcaac
agcaggaactctgggggacccggaagagcttccctgcccagcaacttctcacgagcagga
ggctacaaagaaaaccggtccaatttccgagcttcggaacccaatgagcatcgtggtgtt
taccccagtgaacgcataaagttagagcatggttcccatcggacatggagcagtgagcag
aatataacgagggcaccttctctggagctggacactctgcctaccagtcagaacgatcct
gttaagaaagaagagatcacttctgaaaaccaaacagcggccccggtggaaaccatacag
cagccaccacaggacaaacccatagaaaagaaatcttattcccgagtaaggaggagtaga
gtcaaaggcagtgacacagtgaagccacctgaggaatcgccaccagtggaggcaccacct
cccatgccgcagaaacaggttcaagtgatgccaccaccagctgtgaagagcaacagctgg
gaggtaccggtggatcacagcataagtgcacttgagcaagaagtggctgaaatgacggtt
agcgagcagaactggagcccttctgtgggacagccgcagttcatccagcctcgggagctg
cggggtatcccaaatcatatgcacatgggtagtgggccaccacggtttaaccgcatggag
gagatgggggtacagggtggccgtgcaaaacgctactcttcccagcggcagaggcctgta
cctgagcctgctcccatgcacatcagcatcatggaagggcactattatgatcccttgcaa
ttccagggcccaatttatgcacacagtgagagtcctgcacctcttcctccccagggtatg
attgtgcagccagaaatgcatctcccccacccagttccaggtttacatccgcaccagtca
ccagctcctatgacaaaccccagcttataccctccaccagtctcccttcctcctggacag
cccccaccacaacagctgctaccaccaccttatttttctccagctggggtcatgaacttt
gggaaccctagctatccatacaccccaggagccctaccaccaccacctgcaccacctcat
ctgtactcaaacacacaggcacaatctcaggtgtatggaggggtgacgtattacaataca
gtacatcagcaggtgcagcctaaaccttccccaccacgaagaacgtctcatccagtcact
gtcaagccaccaccacctgaggagaactacaaggagaagacaagtacatag
DBGET
integrated database retrieval system
