Geotrypetes seraphini (Gaboon caecilian): 117347825
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Entry
117347825 CDS
T09159
Symbol
SNRPE
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117347825 (SNRPE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117347825 (SNRPE)
03041 Spliceosome [BR:
gsh03041
]
117347825 (SNRPE)
03032 DNA replication proteins [BR:
gsh03032
]
117347825 (SNRPE)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117347825 (SNRPE)
Spliceosome [BR:
gsh03041
]
Complex A
U1 snRNP components
Sm proteins
117347825 (SNRPE)
U2 snRNP components
117347825 (SNRPE)
Complex B
U1 snRNP components
117347825 (SNRPE)
U4/U6.U5 tri-snRNP components
117347825 (SNRPE)
Complex C
U2 snRNP components
117347825 (SNRPE)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117347825 (SNRPE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
117347825
NCBI-ProteinID:
XP_033775124
UniProt:
A0A6P8NVM1
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All DBs
Position
13:2185921..2194070
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AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHLKTRYRKQLGRIMLKGDNITLLQSVSY
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgcggtcaggggcagaaggtgcagaaggtgatggtgcagcccatcaacctc
atcttcagatatctacagaataggtcccggattcaggtgtggctctatgagcaggtgaac
atgcggatagaaggctgcattatcggatttgatgagtatatgaatttggtgttggatgac
gcagaggaagttcacctaaagaccagatatcggaagcagctgggccggatcatgttgaaa
ggagataacatcaccttactacagagtgtttcttattag
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