Geotrypetes seraphini (Gaboon caecilian): 117347849
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Entry
117347849 CDS
T09159
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117347849 (DDX20)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117347849 (DDX20)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117347849 (DDX20)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
117347849
NCBI-ProteinID:
XP_033775181
UniProt:
A0A6P8PHS6
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Position
13:6402424..6432296
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AA seq
813 aa
AA seq
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MAALQLETAHRLDARRRTRDALGGGEAGDFGSLLLSRPVLDGLEAAGFQRPSPVQLKAIP
LGRCGLDLIVQAKSGTGKTCVFSTVALDSLILENPGTQILILAPTREIAVQIHSVITAIG
IKLEGLECHVFIGGTPLTQDKTRLKKCHIAVGSPGRIKQLIEIGYLSTASIRLFILDEAD
KLLEEGSFQEQINWIYSSLPANKQMLAVSATYPESLAQALTKYMRDPTFVRLNPTDPALI
GLTQYYKVVNSHPLPHKIFEEKVQHLKELFSRVPFNQALVFSNLHSRAQHLADLLTSKGF
PALCISGSMNQNQRLDAMSKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYL
HRIGRAGRFGTYGLAVTYCCRGEEETQMLQIAQKCKLQLQPLPDPIPPGLMEEYLDWDVE
VTTLKPTGDSLNAHVSPLQTTEAPAQAAEMPVIELTSQTCSIGPSETSSRPAKIKVKKPV
KQRHSSVENPSFLVKEGTTGNRKGPGCDTKQRAMSEKADTISRGLLEDKAMSESTRPKIP
CLSSFKRQLDWEASFFDLAEDYEHFIQEGLDKHVEIIRVYTGPAERIEHQSSREAGVNRS
EESVLSDHSSSLGNRMLHALSGSDRDSSSASFSSDSEENRSCSAEGFTSARKGVQKRPTC
VTSSGDDSLPAASASNAPMADADRTNIGNLHPTVKEEHVDNRPNEKHHLTQEKPVKQNAK
RTRKSQINQALSPLAKSHNRGKREEDLDRCSENQEQLPFGSQSYEEYWKSYYQAWHNYYA
VSSNPYYRNFYKRSSWVTAYQMHSVYLRELLKE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctccagctggagacggcgcaccggctggacgcgcggcgacggacgcgcgac
gcgttgggcggcggcgaggcgggagatttcggctcgctgctgctgtcacgaccggtgctg
gacggcttggaggcggccggcttccagcggccgtccccggtgcagctgaaggccatcccg
ctgggacggtgcgggctagatttaattgtacaagctaagtcgggcacagggaaaacatgt
gtgttttctacggttgccttggactccctaattctggaaaatccaggaacgcagatcctt
attttggctccaactcgggagatcgctgtccagattcactctgtcatcacagcgattggg
atcaagcttgaagggctcgagtgccacgtctttattggaggaacccctctaacgcaagac
aaaacgaggctgaaaaagtgccacattgccgtcggctcccctggtcggatcaagcaattg
atagaaattggttatctgagcactgccagtatccgactttttattcttgatgaggctgac
aaacttctagaagaaggaagcttccaggagcaaatcaattggatttattcctccctccct
gctaacaaacagatgttggctgtttcggccacttacccagaatccttggctcaagccttg
acaaagtacatgagggaccccacctttgtgcgactgaatcctacagatcctgctcttatt
ggactgactcagtattataaggtggtgaattcccatccactgcctcacaagatcttcgag
gaaaaggtgcagcacttgaaggagcttttcagcagggttccattcaaccaggccttggtc
ttctccaaccttcacagcagagcccagcatttggccgatctcttgacatcgaaaggcttt
cctgccctgtgtatttcaggcagcatgaatcagaaccaaagacttgatgccatgtccaag
ctgaagcagttccactgtcgggtactgatttcaacagacctgacatctcgaggaattgat
gcagagaaagtgaatttggtcatcaacctggacgtgcctcaggattgggagacctacctg
catcggattggcagggccgggcgtttcggtacctatggcttagctgtgacttactgttgc
cgtggggaagaagaaactcaaatgttgcagatagctcagaaatgcaagctgcagctgcaa
cctttaccagatcctattcctccaggattgatggaggaatatttagactgggatgttgaa
gttaccactctgaaacccactggcgattcattaaatgctcacgtttcacccctgcaaacc
acagaggcaccagcgcaagctgcagaaatgcccgtcatcgagttaacatctcagacatgc
tcaattgggccaagtgaaacgtcttccaggcccgcaaaaataaaagtgaagaagcctgta
aaacagaggcattcatctgtagaaaacccatcctttctggtaaaggagggtaccactgga
aacagaaagggcccaggctgtgacacaaaacagagagcgatgtctgaaaaggctgataca
atcagtagaggtctgcttgaagacaaggcaatgtcagagagcacacgtcccaaaatcccc
tgcctgtcttctttcaagcgccagcttgactgggaagctagtttttttgacttagctgaa
gattatgaacattttattcaggaaggattggacaaacatgtagaaattataagggtgtac
acaggtcctgccgagcggatagaacatcagagttccagagaagcaggagtgaatcggagt
gaagagagcgtgttgtcagatcacagcagttccttggggaatcgtatgctgcatgcatta
tctgggagtgatagagattcttccagtgccagcttttcttctgacagcgaggaaaaccga
tcctgctcggccgaaggttttacaagtgctaggaaaggagtacagaagagacccacatgt
gtcacaagctctggagacgattctctccctgcagccagtgcaagcaatgcacccatggcc
gacgcagatagaactaatattggtaacctccaccccactgtgaaagaggagcacgttgac
aatagaccaaatgagaagcatcacctgacccaagagaagccagtgaaacagaatgccaaa
cggaccagaaagagccaaatcaaccaagcgctcagtccactagcaaaaagtcataacagg
ggaaagagagaggaagatttggacagatgttctgaaaaccaggagcagttgccttttgga
agtcagagttatgaggagtactggaagtcttactatcaggcttggcacaattactatgct
gtatcatcaaatccatactaccgaaacttctacaagcgctccagctgggtgactgcttat
caaatgcactcggtctacctccgagagctactaaaagagtga
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