KEGG   Geotrypetes seraphini (Gaboon caecilian): 117347886
Entry
117347886         CDS       T09159                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117347886 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsh03041]
    117347886 (BCAS2)
   03400 DNA repair and recombination proteins [BR:gsh03400]
    117347886 (BCAS2)
Spliceosome [BR:gsh03041]
 Complex B
  Other components
   Prp19 complex
    117347886 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    117347886 (BCAS2)
DNA repair and recombination proteins [BR:gsh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    117347886 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 Tup_N Csm1_N INO80F OmpH Uso1_p115_C Bap31_Bap29_C Dsc3_C
Other DBs
NCBI-GeneID: 117347886
NCBI-ProteinID: XP_033775266
UniProt: A0A6P8PI02
LinkDB
Position
13:complement(9593653..9608666)
AA seq 225 aa
MAGTGLVAGDVVVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLPTPDYTA
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHLIEQSQKELQKLRKQIQDLNWQRKNIQLSAGGKLRE
MESTWVSLVSKNFEIERAIVQLENEIQQIKQQHGEENKENIQHDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcggggacggggctggtggctggagacgtggtggtggacgcgctgccttactttgat
cagggatacgatgcggccggagtgcgggaggcggctgctgctttggtggaagaagaaacc
aggaggtacagacctaccaagaactacctgagttatttaccaacccctgactacacggct
tttgaaactgaaataatgagaaatgagtttgagagactggcagcacggcagcccttggaa
cttctgagcatgaaaaggtatgagctgcctgccccctcctcaggacagaagaatgatatc
actgcgtggcaggaatgcgtcaacaactctatggcacagctggaacatcaggccgtgcgc
attgagaatctcgaacttatgtctcagcatggctgcaatgcctggaaggtgtataatgaa
aacctggtgcatctcatagaacaatctcaaaaagaactccagaagctgaggaaacaaatc
caggatctgaactggcagcggaaaaacatacaactgagtgcaggggggaagctacgtgaa
atggagtccacgtgggtgtcgctggtcagtaaaaactttgagatagagcgtgccattgtg
caactggagaatgaaatccaacagataaagcagcaacatggagaggaaaacaaagaaaac
attcagcacgatttctga

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